Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 40.79 | 58.49 |
| GSMUA_Achr10P... | Banana | nucleus | 41.67 | 58.1 |
| KRH01889 | Soybean | nucleus | 51.32 | 58.06 |
| KRH51263 | Soybean | nucleus | 50.44 | 57.5 |
| GSMUA_Achr5P17060_001 | Banana | nucleus | 35.09 | 56.74 |
| GSMUA_Achr10P... | Banana | nucleus | 42.11 | 56.64 |
| GSMUA_Achr3P21690_001 | Banana | nucleus | 43.64 | 55.9 |
| GSMUA_Achr11P... | Banana | nucleus | 40.57 | 55.22 |
| PGSC0003DMT400047021 | Potato | nucleus | 48.46 | 54.7 |
| GSMUA_Achr7P23650_001 | Banana | nucleus | 41.23 | 54.02 |
| Solyc01g102740.2.1 | Tomato | nucleus | 48.68 | 53.75 |
| Bra026595.1-P | Field mustard | nucleus | 41.89 | 48.48 |
| Bra017416.1-P | Field mustard | nucleus | 42.11 | 48.24 |
| Bra024818.1-P | Field mustard | nucleus | 42.76 | 47.91 |
| CDY17437 | Canola | nucleus | 42.54 | 47.78 |
| CDY03050 | Canola | nucleus | 42.76 | 47.1 |
| CDY09368 | Canola | nucleus | 41.89 | 47.04 |
| CDY15835 | Canola | nucleus | 41.89 | 46.93 |
| CDY04129 | Canola | nucleus | 41.89 | 46.81 |
| CDY17595 | Canola | nucleus | 42.76 | 46.76 |
| AT2G02450.2 | Thale cress | nucleus | 42.11 | 46.38 |
| TraesCS3D01G398200.1 | Wheat | nucleus | 41.67 | 46.34 |
| TraesCS3A01G403300.1 | Wheat | nucleus | 41.67 | 46.12 |
| TraesCS3B01G436900.1 | Wheat | nucleus | 41.45 | 45.87 |
| HORVU3Hr1G090440.4 | Barley | cytosol, nucleus, peroxisome | 41.23 | 45.85 |
| Zm00001d049687_P001 | Maize | nucleus | 36.18 | 44.84 |
| TraesCS1D01G261800.1 | Wheat | nucleus | 37.94 | 44.47 |
| TraesCS1B01G272600.1 | Wheat | nucleus | 37.72 | 44.44 |
| EES13251 | Sorghum | mitochondrion, nucleus | 36.4 | 44.38 |
| HORVU1Hr1G064300.1 | Barley | nucleus | 38.16 | 44.27 |
| TraesCS1A01G261800.1 | Wheat | nucleus | 37.94 | 44.13 |
| Zm00001d035076_P001 | Maize | mitochondrion, nucleus | 34.21 | 43.58 |
| TraesCS7A01G318500.1 | Wheat | nucleus | 37.06 | 43.56 |
| TraesCS7B01G219400.1 | Wheat | nucleus | 36.84 | 43.19 |
| EES01882 | Sorghum | nucleus | 41.67 | 42.99 |
| TraesCS7D01G315100.1 | Wheat | nucleus | 36.62 | 42.82 |
| HORVU7Hr1G076250.1 | Barley | nucleus | 36.62 | 42.71 |
| Os01t0888300-01 | Rice | nucleus | 41.45 | 41.81 |
| Zm00001d038207_P001 | Maize | nucleus | 38.38 | 41.67 |
| Zm00001d042580_P001 | Maize | nucleus | 40.57 | 41.39 |
| Zm00001d010239_P001 | Maize | nucleus | 37.72 | 41.35 |
| EES19541 | Sorghum | nucleus | 37.94 | 41.29 |
| Os05t0418800-00 | Rice | plastid | 40.35 | 37.86 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 17.32 | 36.92 |
| VIT_03s0038g03410.t01 | Wine grape | nucleus | 22.15 | 36.2 |
| VIT_06s0004g02340.t01 | Wine grape | nucleus | 14.04 | 35.56 |
| VIT_04s0008g00150.t01 | Wine grape | nucleus | 21.05 | 34.41 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 22.37 | 34.23 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 21.93 | 34.01 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 20.61 | 33.94 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 20.18 | 33.33 |
| VIT_18s0001g02300.t01 | Wine grape | nucleus | 21.71 | 33.11 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 21.05 | 32.54 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 20.18 | 32.39 |
| VIT_14s0108g00860.t01 | Wine grape | nucleus | 24.12 | 31.16 |
| VIT_01s0026g02710.t01 | Wine grape | nucleus | 18.64 | 30.14 |
| VIT_06s0004g00020.t01 | Wine grape | nucleus | 19.52 | 29.97 |
| VIT_01s0026g02360.t01 | Wine grape | nucleus | 25.66 | 29.18 |
| VIT_19s0014g03290.t01 | Wine grape | nucleus | 20.83 | 28.53 |
| VIT_08s0007g07670.t01 | Wine grape | nucleus | 20.39 | 27.76 |
| VIT_00s0375g00040.t01 | Wine grape | nucleus | 19.74 | 27.19 |
| VIT_19s0014g03300.t01 | Wine grape | nucleus | 20.83 | 26.91 |
| VIT_08s0040g02110.t01 | Wine grape | nucleus | 19.08 | 25.44 |
| VIT_06s0004g03080.t01 | Wine grape | nucleus | 18.2 | 23.06 |
Protein Annotations
| EntrezGene:100248807 | wikigene:100248807 | MapMan:15.5.17 | Gene3D:3.30.310.150 | ProteinID:CCB54990 | ProteinID:CCB54990.1 |
| UniProt:F6HJY7 | EMBL:FN595990 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | EntrezGene:LOC100248807 | wikigene:LOC100248807 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR45123 | PANTHER:PTHR45123:SF2 | SUPFAM:SSF101941 | TIGR:TC64314 | UniParc:UPI0002107F9C |
| ArrayExpress:VIT_12s0035g02020 | EnsemblPlantsGene:VIT_12s0035g02020 | EnsemblPlants:VIT_12s0035g02020.t01 | RefSeq:XP_002271971 | RefSeq:XP_002271971.1 | SEG:seg |
Description
No Description!
Coordinates
chr12:-:22329785..22332495
Molecular Weight (calculated)
51833.1 Da
IEP (calculated)
7.710
GRAVY (calculated)
-0.693
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVEERSKGT AKVGVFMAIA ANMSQEDNKD EHEHDMVMPG FRFHPTEEEL VEFYLRRKVE GKRFNVELIT SLDLYRYDPW ELPALAAIGE KEWFFYVPRD
101: RKYRNGDRPN RVTTSGYWKA TGADRMIRTE NFRPIGLKKT LVFYSGKAPK GIRTSWIMNE YRLPQQETER SQKAEISLCR VYKRAGVEDH PSLPRSLPSR
201: PSSSRGLQAD KRQQDAAQHA IERFQAFGGQ SQQVEMEKMI GESEGSSSTD VTTALGLSQQ NAYGAIPALS ATLAPPAPEE EDRLLLHHSK QACSLVPPAC
301: TTLFTGSSSL PPHAVDDLHR LVNYQQASIN QQQQYHNNPN QPSHQFSTLP VPQSSQSLAL NTLPGSLQAA FSDRLWEWNP IPEASRDYNS PFNLKKGVCV
401: CVRLLALEVE FWERNNRWVG LRRKHPSHPK TLFTISHEND DSMIDTHRLR DIGVGE
101: RKYRNGDRPN RVTTSGYWKA TGADRMIRTE NFRPIGLKKT LVFYSGKAPK GIRTSWIMNE YRLPQQETER SQKAEISLCR VYKRAGVEDH PSLPRSLPSR
201: PSSSRGLQAD KRQQDAAQHA IERFQAFGGQ SQQVEMEKMI GESEGSSSTD VTTALGLSQQ NAYGAIPALS ATLAPPAPEE EDRLLLHHSK QACSLVPPAC
301: TTLFTGSSSL PPHAVDDLHR LVNYQQASIN QQQQYHNNPN QPSHQFSTLP VPQSSQSLAL NTLPGSLQAA FSDRLWEWNP IPEASRDYNS PFNLKKGVCV
401: CVRLLALEVE FWERNNRWVG LRRKHPSHPK TLFTISHEND DSMIDTHRLR DIGVGE
001: MAIVSSTTSI IPMSNQVNNN EKGIEDNDHR GGQESHVQNE DEADDHDHDM VMPGFRFHPT EEELIEFYLR RKVEGKRFNV ELITFLDLYR YDPWELPAMA
101: AIGEKEWYFY VPRDRKYRNG DRPNRVTTSG YWKATGADRM IRSETSRPIG LKKTLVFYSG KAPKGTRTSW IMNEYRLPHH ETEKYQKAEI SLCRVYKRPG
201: VEDHPSVPRS LSTRHHNHNS STSSRLALRQ QQHHSSSSNH SDNNLNNNNN INNLEKLSTE YSGDGSTTTT TTNSNSDVTI ALANQNIYRP MPYDTSNNTL
301: IVSTRNHQDD DETAIVDDLQ RLVNYQISDG GNINHQYFQI AQQFHHTQQQ NANANALQLV AAATTATTLM PQTQAALAMN MIPAGTIPNN ALWDMWNPIV
401: PDGNRDHYTN IPFK
101: AIGEKEWYFY VPRDRKYRNG DRPNRVTTSG YWKATGADRM IRSETSRPIG LKKTLVFYSG KAPKGTRTSW IMNEYRLPHH ETEKYQKAEI SLCRVYKRPG
201: VEDHPSVPRS LSTRHHNHNS STSSRLALRQ QQHHSSSSNH SDNNLNNNNN INNLEKLSTE YSGDGSTTTT TTNSNSDVTI ALANQNIYRP MPYDTSNNTL
301: IVSTRNHQDD DETAIVDDLQ RLVNYQISDG GNINHQYFQI AQQFHHTQQQ NANANALQLV AAATTATTLM PQTQAALAMN MIPAGTIPNN ALWDMWNPIV
401: PDGNRDHYTN IPFK
Arabidopsis Description
NAC035NAC domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.