Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32801 | Soybean | nucleus | 30.41 | 81.25 |
| KRH32805 | Soybean | nucleus | 31.87 | 80.15 |
| KRH57817 | Soybean | nucleus | 36.55 | 70.62 |
| KRH26008 | Soybean | nucleus | 36.84 | 70.0 |
| KRH67671 | Soybean | cytosol | 52.34 | 62.37 |
| KRG95963 | Soybean | nucleus | 58.48 | 59.35 |
| HORVU3Hr1G032680.1 | Barley | nucleus | 31.29 | 51.94 |
| VIT_01s0026g02710.t01 | Wine grape | nucleus | 39.18 | 47.52 |
| VIT_06s0004g03080.t01 | Wine grape | nucleus | 46.2 | 43.89 |
| VIT_06s0004g02340.t01 | Wine grape | nucleus | 21.64 | 41.11 |
| VIT_00s0375g00040.t01 | Wine grape | nucleus | 38.6 | 39.88 |
| VIT_18s0001g02300.t01 | Wine grape | nucleus | 32.75 | 37.46 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 32.16 | 37.41 |
| TraesCS3B01G194000.1 | Wheat | nucleus | 33.33 | 37.01 |
| TraesCS3D01G170000.1 | Wheat | nucleus | 33.04 | 36.69 |
| TraesCS3A01G162900.1 | Wheat | cytosol | 33.04 | 36.69 |
| VIT_06s0004g00020.t01 | Wine grape | nucleus | 31.29 | 36.03 |
| VIT_19s0014g03300.t01 | Wine grape | nucleus | 37.13 | 35.98 |
| VIT_08s0007g07670.t01 | Wine grape | nucleus | 34.21 | 34.93 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 21.64 | 34.58 |
| VIT_19s0014g03290.t01 | Wine grape | nucleus | 32.75 | 33.63 |
| EER99985 | Sorghum | nucleus | 33.63 | 32.49 |
| VIT_03s0038g03410.t01 | Wine grape | nucleus | 24.56 | 30.11 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 23.39 | 28.99 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 23.39 | 28.88 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 25.15 | 28.86 |
| VIT_04s0008g00150.t01 | Wine grape | nucleus | 23.39 | 28.67 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 23.98 | 27.8 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 22.81 | 27.46 |
| VIT_14s0108g00860.t01 | Wine grape | nucleus | 27.49 | 26.63 |
| VIT_01s0026g02360.t01 | Wine grape | nucleus | 27.78 | 23.69 |
| VIT_12s0035g02020.t01 | Wine grape | nucleus | 25.44 | 19.08 |
Protein Annotations
| EntrezGene:100248298 | wikigene:100248298 | MapMan:15.5.17 | Gene3D:3.30.310.150 | ProteinID:CCB57059 | ProteinID:CCB57059.1 |
| UniProt:F6HR10 | EMBL:FN596008 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | EntrezGene:LOC100248298 | wikigene:LOC100248298 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR45430 | SUPFAM:SSF101941 | UniParc:UPI00015CAA99 | ArrayExpress:VIT_08s0040g02110 | EnsemblPlantsGene:VIT_08s0040g02110 |
| EnsemblPlants:VIT_08s0040g02110.t01 | RefSeq:XP_002275457 | RefSeq:XP_002275457.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr8:+:13224257..13225775
Molecular Weight (calculated)
39217.0 Da
IEP (calculated)
8.317
GRAVY (calculated)
-0.720
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTQLSSNIQ LQLPPGFRFH PSDEELIIHY LRNKATSSPI PASIIAEVDL YKYNPWELPT KALFGQDEWY FFTPRDRKYP NGVRPNRAAA SGYWKATGTD
101: KPILTSCGTR SIGVKKALVF YKGRPPKGVK TDWIMHEYRL LDSMFRTLKH KGSMRLDDWV LCRVRQKSSI PRNIWEDRNG PSSEPASYSP AVDKACNMTT
201: NSNVEMIKSY LYNDCPLLPY IFASQDFSAI SFEGRNKGKF YSSVCSENNS DQKNLLVSVS SSNSLFNPQK RKPIEGNQYE GFLPPSKKLN NRDDKDKFLL
301: SVDSTEMNCS RTEESEDNNF TADQWDSITQ YQELNYLAFT ES
101: KPILTSCGTR SIGVKKALVF YKGRPPKGVK TDWIMHEYRL LDSMFRTLKH KGSMRLDDWV LCRVRQKSSI PRNIWEDRNG PSSEPASYSP AVDKACNMTT
201: NSNVEMIKSY LYNDCPLLPY IFASQDFSAI SFEGRNKGKF YSSVCSENNS DQKNLLVSVS SSNSLFNPQK RKPIEGNQYE GFLPPSKKLN NRDDKDKFLL
301: SVDSTEMNCS RTEESEDNNF TADQWDSITQ YQELNYLAFT ES
001: MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS
Arabidopsis Description
NAC025NAC transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY42]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.