Factsheet for VIT_08s0007g07670.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42902	Canola	nucleus	39.1	46.79
VIT_01s0026g02710.t01	Wine grape	nucleus	35.82	42.55
KRG94779	Soybean	nucleus	42.39	42.26
Bra031949.1-P	Field mustard	nucleus	40.9	42.15
CDY50880	Canola	nucleus	40.9	42.15
KRH70122	Soybean	nucleus	44.48	42.09
KRH06741	Soybean	nucleus	43.28	41.08
KRH08465	Soybean	nucleus	44.18	40.77
VIT_06s0004g02340.t01	Wine grape	nucleus	21.79	40.56
Bra040152.1-P	Field mustard	nucleus	42.39	39.78
CDY29983	Canola	nucleus	42.09	39.72
VIT_00s0375g00040.t01	Wine grape	nucleus	39.1	39.58
AT3G04070.1	Thale cress	nucleus	42.39	39.55
VIT_19s0014g03300.t01	Wine grape	nucleus	40.9	38.81
VIT_06s0004g00020.t01	Wine grape	nucleus	33.43	37.71
VIT_07s0031g02610.t01	Wine grape	nucleus	32.84	37.41
VIT_18s0001g02300.t01	Wine grape	nucleus	33.13	37.12
VIT_19s0027g00880.t01	Wine grape	nucleus	22.09	34.58
VIT_08s0040g02110.t01	Wine grape	nucleus	34.93	34.21
VIT_06s0004g03080.t01	Wine grape	nucleus	36.42	33.89
VIT_19s0014g03290.t01	Wine grape	nucleus	32.84	33.03
VIT_04s0008g00150.t01	Wine grape	nucleus	24.18	29.03
VIT_03s0038g03410.t01	Wine grape	nucleus	23.88	28.67
VIT_19s0027g00860.t01	Wine grape	nucleus	23.58	28.62
VIT_12s0028g00860.t01	Wine grape	nucleus	25.07	28.19
VIT_19s0027g00870.t01	Wine grape	nucleus	23.28	28.16
VIT_19s0027g00910.t01	Wine grape	cytoskeleton, cytosol, nucleus	23.88	27.12
VIT_19s0027g00840.t01	Wine grape	nucleus	22.99	27.11
VIT_14s0108g00860.t01	Wine grape	nucleus	27.76	26.35
VIT_01s0026g02360.t01	Wine grape	nucleus	28.66	23.94
VIT_12s0035g02020.t01	Wine grape	nucleus	27.76	20.39

Protein Annotations

EntrezGene:100250331	wikigene:100250331	MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:CCB55183	ProteinID:CCB55183.1
UniProt:F6HLA0	EMBL:FN595991	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009413	GO:GO:0009628	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793
GO:GO:0009987	GO:GO:0010365	GO:GO:0043565	InterPro:IPR003441	InterPro:IPR036093	EntrezGene:LOC100250331
wikigene:LOC100250331	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR45430
SUPFAM:SSF101941	UniParc:UPI0001983F2C	ArrayExpress:VIT_08s0007g07670	EnsemblPlantsGene:VIT_08s0007g07670	EnsemblPlants:VIT_08s0007g07670.t01	unigene:Vvi.6467
RefSeq:XP_002282566	RefSeq:XP_002282566.1	RefSeq:XP_002282585	RefSeq:XP_002282585.1	SEG:seg	:

Description

No Description!

Coordinates

chr8:-:21134424..21136523

Molecular Weight (calculated)

37505.3 Da

IEP (calculated)

8.933

GRAVY (calculated)

-0.628

Length

335 amino acids

Sequence
(BLAST)

001: MDNPQSTLPP GFRFHPTDEE LILHYLSKKV TSTPFPVSII ADVDIYKFDP WELPGKAVFG EKEWYFFSPR DRKYPNGLRP NRAAASGYWK ATGTDKTIVA
101: ASSIGGGGHG HIGVKKALVF YQGRPPKGIK TNWIMHEYRL AQPPNPAINK PPLKLRDASM RLDNWVLCRI YKKSNAVPPA TAAAIDDDRE QEDSFMEESL
201: KSHPNQSTIQ PQKPSSFSNI LDAMDSSTLG HLFSDIQYSD PTGFEPTPPA KYGSLGQSND ILPKLPYWKS VPSMENQLKR QRSSMDGDVP CPSKKLTSSC
301: TFTTNPNQSD LPQSYFNQSL FNQALLLNPY FPFQG

Best Arabidopsis Sequence Match ( AT3G04070.1 )
(BLAST)

001: MISKDPRSSL PPGFRFHPTD EELILHYLRK KVSSSPVPLS IIADVDIYKS DPWDLPAKAP FGEKEWYFFS PRDRKYPNGA RPNRAAASGY WKATGTDKLI
101: AVPNGEGFHE NIGIKKALVF YRGKPPKGVK TNWIMHEYRL ADSLSPKRIN SSRSGGSEVN NNFGDRNSKE YSMRLDDWVL CRIYKKSHAS LSSPDVALVT
201: SNQEHEENDN EPFVDRGTFL PNLQNDQPLK RQKSSCSFSN LLDATDLTFL ANFLNETPEN RSESDFSFMI GNFSNPDIYG NHYLDQKLPQ LSSPTSETSG
301: IGSKRERVDF AEETINASKK MMNTYSYNNS IDQMDHSMMQ QPSFLNQELM MSSHLQYQG

Arabidopsis Description

NAC047NAC transcription factor 47 [Source:UniProtKB/Swiss-Prot;Acc:Q84TD6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.