Factsheet for VIT_00s0375g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0014g03300.t01	Wine grape	nucleus	61.93	58.07
VIT_01s0026g02710.t01	Wine grape	nucleus	41.09	48.23
TraesCS2D01G214100.1	Wheat	nucleus	54.68	45.36
HORVU2Hr1G039640.2	Barley	nucleus	54.98	44.94
TraesCS2A01G201800.2	Wheat	nucleus	54.98	44.72
TraesCS2B01G228900.1	Wheat	nucleus	54.68	44.58
VIT_07s0031g02610.t01	Wine grape	nucleus	38.67	43.54
TraesCS6D01G096300.1	Wheat	nucleus	53.47	43.07
Os07t0566500-01	Rice	nucleus	54.98	42.82
HORVU6Hr1G019380.2	Barley	plastid	52.87	42.68
TraesCS6A01G108300.2	Wheat	nucleus	53.47	42.55
VIT_06s0004g00020.t01	Wine grape	nucleus	38.07	42.42
Zm00001d021818_P002	Maize	nucleus	53.47	42.24
OQU90111	Sorghum	nucleus	53.17	42.11
VIT_18s0001g02300.t01	Wine grape	nucleus	37.46	41.47
VIT_06s0004g02340.t01	Wine grape	nucleus	22.36	41.11
VIT_19s0014g03290.t01	Wine grape	nucleus	39.58	39.34
VIT_08s0007g07670.t01	Wine grape	nucleus	39.58	39.1
VIT_08s0040g02110.t01	Wine grape	nucleus	39.88	38.6
VIT_19s0027g00880.t01	Wine grape	nucleus	23.87	36.92
VIT_06s0004g03080.t01	Wine grape	nucleus	38.37	35.28
VIT_19s0027g00860.t01	Wine grape	nucleus	26.89	32.25
VIT_03s0038g03410.t01	Wine grape	nucleus	26.89	31.9
VIT_19s0027g00870.t01	Wine grape	nucleus	25.98	31.05
VIT_12s0028g00860.t01	Wine grape	nucleus	26.59	29.53
VIT_04s0008g00150.t01	Wine grape	nucleus	24.77	29.39
VIT_19s0027g00840.t01	Wine grape	nucleus	24.77	28.87
VIT_19s0027g00910.t01	Wine grape	cytoskeleton, cytosol, nucleus	25.68	28.81
VIT_14s0108g00860.t01	Wine grape	nucleus	30.21	28.33
VIT_01s0026g02360.t01	Wine grape	nucleus	31.12	25.69
VIT_12s0035g02020.t01	Wine grape	nucleus	27.19	19.74

Protein Annotations

EntrezGene:100244547	wikigene:100244547	MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:CBI38329	ProteinID:CBI38329.3
UniProt:D7U6G0	EMBL:FN596524	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009555	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0048653	InterPro:IPR003441
InterPro:IPR036093	EntrezGene:LOC100244547	wikigene:LOC100244547	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR45430	PANTHER:PTHR45430:SF2	SUPFAM:SSF101941	TIGR:TC61151	UniParc:UPI0001BE50C0
ArrayExpress:VIT_00s0375g00040	EnsemblPlantsGene:VIT_00s0375g00040	EnsemblPlants:VIT_00s0375g00040.t01	RefSeq:XP_003635288	RefSeq:XP_003635288.1	:

Description

No Description!

Coordinates

chrUn:+:26438134..26439605

Molecular Weight (calculated)

36746.2 Da

IEP (calculated)

9.794

GRAVY (calculated)

-0.714

Length

331 amino acids

Sequence
(BLAST)

001: MDSTDSSSGS HHPQLPPGFR FHPTDEELVV HYLKRKAASV PLPVTIIADV DLYKFDPWEL PSKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG
101: TDKPILTSNG SQKVGVKKAL VFYGGKPPKG IKTNWIMHEY RLIDSTSSNT KPPGADMGNK KGSLRLDDWV LCRIYKKNIS QRPMERDKEE SMEALLASLP
201: ASSMTSQQNT RAQTLRSTNF GAVLEHEEIS FEGMLTGQSI QGLQSSSMSQ YWNGAGSIGP SSSGKHLHTD HTSGTSTSEM DGNSSFVSLL NQLPQSGTFH
301: QNTLLGSLAD EEKFNLRNIN RKKCLRRNKV G

Best Arabidopsis Sequence Match ( AT1G61110.1 )
(BLAST)

001: MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS

Arabidopsis Description

NAC025NAC transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY42]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.