Factsheet for Zm00001d021818_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90111	Sorghum	nucleus	89.02	89.23
CDX82430	Canola	nucleus	34.37	72.36
CDY22671	Canola	nucleus	34.13	71.86
TraesCS2D01G214100.1	Wheat	nucleus	67.54	70.93
TraesCS2A01G201800.2	Wheat	nucleus	68.02	70.02
TraesCS2B01G228900.1	Wheat	nucleus	66.59	68.72
HORVU2Hr1G039640.2	Barley	nucleus	65.87	68.15
Os07t0566500-01	Rice	nucleus	68.74	67.76
TraesCS6D01G096300.1	Wheat	nucleus	65.16	66.42
TraesCS6A01G108300.2	Wheat	nucleus	64.44	64.9
HORVU6Hr1G019380.2	Barley	plastid	63.01	64.39
VIT_00s0375g00040.t01	Wine grape	nucleus	42.24	53.47
CDY12886	Canola	nucleus	39.62	51.71
Solyc07g063420.2.1	Tomato	nucleus	40.57	51.67
CDY40970	Canola	nucleus	39.62	51.55
Bra027101.1-P	Field mustard	nucleus	39.14	51.41
AT1G61110.1	Thale cress	nucleus	39.62	51.39
CDY69545	Canola	nucleus	37.95	50.96
PGSC0003DMT400049664	Potato	nucleus	41.05	50.74
AT1G52880.1	Thale cress	nucleus	38.42	50.31
CDY56427	Canola	nucleus	39.14	50.15
GSMUA_Achr9P19520_001	Banana	nucleus	38.9	50.0
CDY53806	Canola	nucleus	37.71	49.69
CDX97675	Canola	nucleus	40.33	49.27
KRH22138	Soybean	nucleus	43.91	49.07
Bra027237.1-P	Field mustard	nucleus	40.81	48.72
Bra018997.1-P	Field mustard	nucleus	37.71	48.32
KRH27199	Soybean	nucleus	43.2	48.27
CDY20131	Canola	nucleus	40.1	48.0
PGSC0003DMT400064428	Potato	nucleus	39.62	47.29
Bra021114.1-P	Field mustard	nucleus	40.33	47.21
Bra001597.1-P	Field mustard	nucleus	39.38	47.14
AT3G15510.1	Thale cress	nucleus	40.81	46.98
CDX98562	Canola	nucleus	40.1	46.8
GSMUA_Achr1P08860_001	Banana	nucleus	39.14	45.68
Solyc10g006880.2.1	Tomato	nucleus	38.66	45.63
Zm00001d042609_P001	Maize	cytosol, mitochondrion, nucleus	29.59	42.03
Zm00001d005208_P001	Maize	nucleus	29.36	40.59
Zm00001d019207_P001	Maize	nucleus	28.16	39.33
Zm00001d012527_P001	Maize	cytosol, mitochondrion, nucleus	28.16	38.31
Zm00001d034601_P001	Maize	nucleus	28.16	37.82
Zm00001d028999_P001	Maize	nucleus	33.65	37.8
Zm00001d038221_P001	Maize	plastid	30.55	37.76
Zm00001d008399_P001	Maize	nucleus	33.65	35.43
Zm00001d000112_P001	Maize	nucleus	30.31	35.38
Zm00001d007850_P001	Maize	nucleus	19.57	32.67
Zm00001d013003_P001	Maize	nucleus, plastid	27.92	31.88
Zm00001d022424_P001	Maize	nucleus	23.87	30.3
Zm00001d014843_P001	Maize	nucleus	19.33	30.22
Zm00001d013151_P001	Maize	cytosol	23.87	29.76
Zm00001d023294_P001	Maize	nucleus	33.17	29.26
Zm00001d031164_P001	Maize	nucleus	20.53	28.1
Zm00001d048347_P001	Maize	nucleus	20.76	27.44
Zm00001d027530_P001	Maize	nucleus	20.76	26.77
Zm00001d034277_P001	Maize	cytosol, mitochondrion, nucleus	23.15	26.36
Zm00001d036364_P001	Maize	nucleus	20.29	26.07
Zm00001d050410_P001	Maize	nucleus	23.63	25.98
Zm00001d018773_P001	Maize	nucleus	22.2	25.98
Zm00001d032182_P001	Maize	nucleus	22.91	24.49
Zm00001d049687_P001	Maize	nucleus	20.76	23.64
Zm00001d035076_P001	Maize	mitochondrion, nucleus	19.57	22.91
Zm00001d038207_P001	Maize	nucleus	22.91	22.86
Zm00001d020446_P001	Maize	nucleus	21.48	22.84
Zm00001d010239_P001	Maize	nucleus	22.67	22.84
Zm00001d042580_P001	Maize	nucleus	23.15	21.7
Zm00001d018038_P001	Maize	nucleus	23.63	20.08

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A1D6IGT1	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009555	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0048653
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	ProteinID:ONM58726.1	ProteinID:ONM58727.1
PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR45430	PANTHER:PTHR45430:SF1	SUPFAM:SSF101941	UniParc:UPI000844C767
EnsemblPlantsGene:Zm00001d021818	EnsemblPlants:Zm00001d021818_P002	EnsemblPlants:Zm00001d021818_T002	SEG:seg	:	:

Description

NAC-transcription factor 132NAC transcription factor 25

Coordinates

chr7:-:163653395..163655534

Molecular Weight (calculated)

44617.4 Da

IEP (calculated)

7.731

GRAVY (calculated)

-0.345

Length

419 amino acids

Sequence
(BLAST)

001: MRSMESTDSS SGELPPPQKQ PSSAPDLPPG FRFHPTDEEL VVHYLKKKAA SVPLPVAIIA EVDLYKFDPW ELPDKATFGE QEWYFFSPRD RKYPNGARPN
101: RAATSGYWKA TGTDKPIMAS GGNREKVGVK KALVFYRGKP PKGLKTNWIM HEYRLADAAS STTSRPPPPC NAGGKATSLR LIKLYLVSQL DDWVLCRIYK
201: KIDKLGVGDP PRIMECGEDS VENAVAAYPT HAAAAAMAVA VAGGGGAYHT GNYTSLIHHH HEDSFLVDGL LTAEDAGGSS LSQLAAAARA AAPTDTTKQL
301: LVPSSTTPFN WLDASALTIL PPAKRFHGYN RDTTDGGGTS LPSPSERNNL QAAVGAVDSG ASGGTSAVIP SFLNPLGVQG ATSYHHHAIF GTPVTPEAAA
401: AAACSFQHPY QLSGVNWNP

Best Arabidopsis Sequence Match ( AT3G15510.1 )
(BLAST)

001: MESTDSSGGP PPPQPNLPPG FRFHPTDEEL VVHYLKRKAA SAPLPVAIIA EVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIENKPN NRPPGCDFGN KKNSLRLDDW VLCRIYKKNN ASRHVDNDKD HDMIDYIFRK
201: IPPSLSMAAA STGLHQHHHN VSRSMNFFPG KFSGGGYGIF SDGGNTSIYD GGGMINNIGT DSVDHDNNAD VVGLNHASSS GPMMMANLKR TLPVPYWPVA
301: DEEQDASPSK RFHGVGGGGG DCSNMSSSMM EETPPLMQQQ GGVLGDGLFR TTSYQLPGLN WYSS

Arabidopsis Description

NAC056NAC transcription factor 56 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD44]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.