Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 1
- plastid 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Zm00001d014297_P006 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G08790.1 | Zm00001d014297_P006 | AT5G35750.1 | 18642946 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG22031 | Sorghum | nucleus | 86.73 | 86.22 |
TraesCS1A01G263700.1 | Wheat | nucleus | 72.86 | 84.3 |
TraesCS1D01G263800.1 | Wheat | nucleus | 74.34 | 84.0 |
HORVU1Hr1G063740.1 | Barley | nucleus | 72.27 | 83.62 |
TraesCS1B01G274300.1 | Wheat | nucleus | 73.45 | 82.72 |
Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 67.55 | 77.63 |
GSMUA_Achr6P25380_001 | Banana | nucleus | 50.74 | 62.77 |
KRH17977 | Soybean | nucleus | 48.97 | 61.94 |
KRH16387 | Soybean | nucleus | 49.85 | 60.36 |
VIT_18s0001g02300.t01 | Wine grape | nucleus | 53.1 | 60.2 |
AT1G01720.1 | Thale cress | nucleus | 50.44 | 59.17 |
Bra033239.1-P | Field mustard | nucleus | 49.56 | 58.95 |
CDX90054 | Canola | nucleus | 49.56 | 58.95 |
CDY40732 | Canola | cytosol, nucleus, plastid | 44.84 | 58.91 |
CDY41537 | Canola | nucleus | 43.36 | 58.8 |
Bra038663.1-P | Field mustard | nucleus | 43.36 | 58.8 |
Solyc06g060230.2.1 | Tomato | nucleus | 51.33 | 58.78 |
VIT_07s0031g02610.t01 | Wine grape | nucleus | 50.74 | 58.5 |
PGSC0003DMT400045294 | Potato | nucleus | 51.03 | 58.45 |
KRH63977 | Soybean | nucleus | 50.15 | 58.42 |
PGSC0003DMT400023917 | Potato | nucleus | 50.15 | 58.42 |
CDY15158 | Canola | nucleus | 49.26 | 58.39 |
CDX84443 | Canola | nucleus | 43.36 | 58.33 |
KRH64668 | Soybean | nucleus | 51.62 | 58.33 |
KRH53247 | Soybean | nucleus | 51.33 | 58.19 |
AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 43.36 | 58.1 |
KRH53959 | Soybean | nucleus | 50.44 | 57.97 |
Solyc04g009440.2.1 | Tomato | nucleus | 51.33 | 57.81 |
KRH59618 | Soybean | nucleus | 50.74 | 57.72 |
PGSC0003DMT400082472 | Potato | nucleus | 51.33 | 57.43 |
Solyc11g017470.1.1 | Tomato | nucleus | 49.26 | 57.39 |
Bra029201.1-P | Field mustard | cytosol | 44.84 | 57.36 |
CDY44788 | Canola | cytosol, nucleus, plastid | 44.25 | 57.25 |
CDX78352 | Canola | cytosol, nucleus, plastid | 44.25 | 57.25 |
CDY31350 | Canola | nucleus | 44.54 | 56.98 |
CDY40894 | Canola | nucleus | 43.66 | 56.92 |
CDY21567 | Canola | nucleus | 46.31 | 56.47 |
GSMUA_Achr6P17720_001 | Banana | nucleus | 48.08 | 56.21 |
CDX69919 | Canola | nucleus | 46.02 | 56.12 |
Bra028645.1-P | Field mustard | nucleus | 46.02 | 56.12 |
Bra009370.1-P | Field mustard | nucleus | 46.02 | 56.12 |
AT5G08790.1 | Thale cress | nucleus | 46.61 | 55.83 |
CDY38346 | Canola | cytosol, nucleus, plastid | 42.77 | 55.77 |
Bra008309.1-P | Field mustard | cytosol, nucleus, plastid | 42.77 | 55.77 |
CDX81120 | Canola | nucleus | 39.53 | 55.6 |
Bra006015.1-P | Field mustard | cytosol, nucleus, plastid | 45.43 | 55.0 |
CDY39846 | Canola | mitochondrion | 44.25 | 51.02 |
GSMUA_Achr3P18990_001 | Banana | plastid | 48.97 | 49.85 |
CDX84050 | Canola | nucleus | 28.32 | 49.74 |
Zm00001d000112_P001 | Maize | nucleus | 50.74 | 47.91 |
AT5G63790.2 | Thale cress | cytosol | 45.43 | 47.83 |
Zm00001d019207_P001 | Maize | nucleus | 37.76 | 42.67 |
Zm00001d005208_P001 | Maize | nucleus | 38.05 | 42.57 |
Zm00001d034601_P001 | Maize | nucleus | 38.64 | 41.99 |
Zm00001d012527_P001 | Maize | cytosol, mitochondrion, nucleus | 36.87 | 40.58 |
Zm00001d013003_P001 | Maize | nucleus, plastid | 38.05 | 35.15 |
Zm00001d007850_P001 | Maize | nucleus | 24.48 | 33.07 |
Zm00001d028999_P001 | Maize | nucleus | 34.81 | 31.64 |
Zm00001d021818_P002 | Maize | nucleus | 37.76 | 30.55 |
Zm00001d014843_P001 | Maize | nucleus | 23.89 | 30.22 |
Zm00001d008399_P001 | Maize | nucleus | 34.81 | 29.65 |
Zm00001d027530_P001 | Maize | nucleus | 25.96 | 27.08 |
Zm00001d048347_P001 | Maize | nucleus | 24.78 | 26.5 |
Zm00001d013151_P001 | Maize | cytosol | 26.25 | 26.49 |
Zm00001d031164_P001 | Maize | nucleus | 23.6 | 26.14 |
Zm00001d022424_P001 | Maize | nucleus | 24.78 | 25.45 |
Zm00001d036364_P001 | Maize | nucleus | 24.19 | 25.15 |
Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 26.55 | 24.46 |
Zm00001d023294_P001 | Maize | nucleus | 33.33 | 23.79 |
Zm00001d018773_P001 | Maize | nucleus | 25.07 | 23.74 |
Zm00001d050410_P001 | Maize | nucleus | 26.55 | 23.62 |
Zm00001d049687_P001 | Maize | nucleus | 24.78 | 22.83 |
Zm00001d032182_P001 | Maize | nucleus | 26.25 | 22.7 |
Zm00001d035076_P001 | Maize | mitochondrion, nucleus | 23.89 | 22.63 |
Zm00001d020446_P001 | Maize | nucleus | 25.96 | 22.34 |
Zm00001d038207_P001 | Maize | nucleus | 26.84 | 21.67 |
Zm00001d010239_P001 | Maize | nucleus | 25.07 | 20.43 |
Zm00001d042580_P001 | Maize | nucleus | 26.84 | 20.36 |
Zm00001d018038_P001 | Maize | nucleus | 25.66 | 17.65 |
Protein Annotations
EntrezGene:100216773 | MapMan:15.5.17 | Gene3D:3.30.310.150 | ProteinID:AQK86068.1 | UniProt:B4FJN5 | EMBL:BT037323 |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | EMBL:KJ727956 |
EMBL:KM987612 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 |
PANTHER:PTHR31719:SF43 | SUPFAM:SSF101941 | UniParc:UPI00017B7200 | EnsemblPlantsGene:Zm00001d038221 | EnsemblPlants:Zm00001d038221_P001 | EnsemblPlants:Zm00001d038221_T001 |
SEG:seg | : | : | : | : | : |
Description
NAC-transcription factor 20NAC domain containing protein 32
Coordinates
chr6:+:151942943..151944950
Molecular Weight (calculated)
35807.5 Da
IEP (calculated)
9.350
GRAVY (calculated)
-0.401
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGGGGRVP AAAAAQSQEL QLPPGFRFHP TDEELVVHYL CRRCAGLPIS VPIIAEVDLY KHDPWQLPRM ALYGEKEWYF FSPRDRKYPN GSRPNRAAGA
101: GYWKATGADK PVGTPKPVAI KKALVFYAGK APKGDKTNWI MHEYRLADVD RTARKKNNSL RLDDWVLCRI YNKKGALEKP TGAGGRAEAS SQGALGSMSM
201: GSPPEQKPSV LPSATATATA AAGTGYAPLP FSELAAYYEV RPSDSMPRAH GADSSCSGHA LAATSSCGGG GGERPEVQSQ PKIAEWERTF AAGAGPGINP
301: AGSMLGLGGH QLGSAAVGVG LPAGDPLLQD ILTYWGKPY
101: GYWKATGADK PVGTPKPVAI KKALVFYAGK APKGDKTNWI MHEYRLADVD RTARKKNNSL RLDDWVLCRI YNKKGALEKP TGAGGRAEAS SQGALGSMSM
201: GSPPEQKPSV LPSATATATA AAGTGYAPLP FSELAAYYEV RPSDSMPRAH GADSSCSGHA LAATSSCGGG GGERPEVQSQ PKIAEWERTF AAGAGPGINP
301: AGSMLGLGGH QLGSAAVGVG LPAGDPLLQD ILTYWGKPY
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.