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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • mitochondrion 2
  • nucleus 1
  • plastid 2
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d014297_P006

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G08790.1 Zm00001d014297_P006 AT5G35750.1 18642946
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG22031 Sorghum nucleus 86.73 86.22
TraesCS1A01G263700.1 Wheat nucleus 72.86 84.3
TraesCS1D01G263800.1 Wheat nucleus 74.34 84.0
HORVU1Hr1G063740.1 Barley nucleus 72.27 83.62
TraesCS1B01G274300.1 Wheat nucleus 73.45 82.72
Zm00001d042609_P001 Maize cytosol, mitochondrion, nucleus 67.55 77.63
GSMUA_Achr6P25380_001 Banana nucleus 50.74 62.77
KRH17977 Soybean nucleus 48.97 61.94
KRH16387 Soybean nucleus 49.85 60.36
VIT_18s0001g02300.t01 Wine grape nucleus 53.1 60.2
AT1G01720.1 Thale cress nucleus 50.44 59.17
Bra033239.1-P Field mustard nucleus 49.56 58.95
CDX90054 Canola nucleus 49.56 58.95
CDY40732 Canola cytosol, nucleus, plastid 44.84 58.91
CDY41537 Canola nucleus 43.36 58.8
Bra038663.1-P Field mustard nucleus 43.36 58.8
Solyc06g060230.2.1 Tomato nucleus 51.33 58.78
VIT_07s0031g02610.t01 Wine grape nucleus 50.74 58.5
PGSC0003DMT400045294 Potato nucleus 51.03 58.45
KRH63977 Soybean nucleus 50.15 58.42
PGSC0003DMT400023917 Potato nucleus 50.15 58.42
CDY15158 Canola nucleus 49.26 58.39
CDX84443 Canola nucleus 43.36 58.33
KRH64668 Soybean nucleus 51.62 58.33
KRH53247 Soybean nucleus 51.33 58.19
AT1G77450.1 Thale cress cytosol, nucleus, plastid 43.36 58.1
KRH53959 Soybean nucleus 50.44 57.97
Solyc04g009440.2.1 Tomato nucleus 51.33 57.81
KRH59618 Soybean nucleus 50.74 57.72
PGSC0003DMT400082472 Potato nucleus 51.33 57.43
Solyc11g017470.1.1 Tomato nucleus 49.26 57.39
Bra029201.1-P Field mustard cytosol 44.84 57.36
CDY44788 Canola cytosol, nucleus, plastid 44.25 57.25
CDX78352 Canola cytosol, nucleus, plastid 44.25 57.25
CDY31350 Canola nucleus 44.54 56.98
CDY40894 Canola nucleus 43.66 56.92
CDY21567 Canola nucleus 46.31 56.47
GSMUA_Achr6P17720_001 Banana nucleus 48.08 56.21
CDX69919 Canola nucleus 46.02 56.12
Bra028645.1-P Field mustard nucleus 46.02 56.12
Bra009370.1-P Field mustard nucleus 46.02 56.12
AT5G08790.1 Thale cress nucleus 46.61 55.83
CDY38346 Canola cytosol, nucleus, plastid 42.77 55.77
Bra008309.1-P Field mustard cytosol, nucleus, plastid 42.77 55.77
CDX81120 Canola nucleus 39.53 55.6
Bra006015.1-P Field mustard cytosol, nucleus, plastid 45.43 55.0
CDY39846 Canola mitochondrion 44.25 51.02
GSMUA_Achr3P18990_001 Banana plastid 48.97 49.85
CDX84050 Canola nucleus 28.32 49.74
Zm00001d000112_P001 Maize nucleus 50.74 47.91
AT5G63790.2 Thale cress cytosol 45.43 47.83
Zm00001d019207_P001 Maize nucleus 37.76 42.67
Zm00001d005208_P001 Maize nucleus 38.05 42.57
Zm00001d034601_P001 Maize nucleus 38.64 41.99
Zm00001d012527_P001 Maize cytosol, mitochondrion, nucleus 36.87 40.58
Zm00001d013003_P001 Maize nucleus, plastid 38.05 35.15
Zm00001d007850_P001 Maize nucleus 24.48 33.07
Zm00001d028999_P001 Maize nucleus 34.81 31.64
Zm00001d021818_P002 Maize nucleus 37.76 30.55
Zm00001d014843_P001 Maize nucleus 23.89 30.22
Zm00001d008399_P001 Maize nucleus 34.81 29.65
Zm00001d027530_P001 Maize nucleus 25.96 27.08
Zm00001d048347_P001 Maize nucleus 24.78 26.5
Zm00001d013151_P001 Maize cytosol 26.25 26.49
Zm00001d031164_P001 Maize nucleus 23.6 26.14
Zm00001d022424_P001 Maize nucleus 24.78 25.45
Zm00001d036364_P001 Maize nucleus 24.19 25.15
Zm00001d034277_P001 Maize cytosol, mitochondrion, nucleus 26.55 24.46
Zm00001d023294_P001 Maize nucleus 33.33 23.79
Zm00001d018773_P001 Maize nucleus 25.07 23.74
Zm00001d050410_P001 Maize nucleus 26.55 23.62
Zm00001d049687_P001 Maize nucleus 24.78 22.83
Zm00001d032182_P001 Maize nucleus 26.25 22.7
Zm00001d035076_P001 Maize mitochondrion, nucleus 23.89 22.63
Zm00001d020446_P001 Maize nucleus 25.96 22.34
Zm00001d038207_P001 Maize nucleus 26.84 21.67
Zm00001d010239_P001 Maize nucleus 25.07 20.43
Zm00001d042580_P001 Maize nucleus 26.84 20.36
Zm00001d018038_P001 Maize nucleus 25.66 17.65
Protein Annotations
EntrezGene:100216773MapMan:15.5.17Gene3D:3.30.310.150ProteinID:AQK86068.1UniProt:B4FJN5EMBL:BT037323
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR003441InterPro:IPR036093EMBL:KJ727956
EMBL:KM987612InterPro:NAC-domInterPro:NAC_dom_sfPFAM:PF02365PFscan:PS51005PANTHER:PTHR31719
PANTHER:PTHR31719:SF43SUPFAM:SSF101941UniParc:UPI00017B7200EnsemblPlantsGene:Zm00001d038221EnsemblPlants:Zm00001d038221_P001EnsemblPlants:Zm00001d038221_T001
SEG:seg:::::
Description
NAC-transcription factor 20NAC domain containing protein 32
Coordinates
chr6:+:151942943..151944950
Molecular Weight (calculated)
35807.5 Da
IEP (calculated)
9.350
GRAVY (calculated)
-0.401
Length
339 amino acids
Sequence
(BLAST)
001: MSSGGGGRVP AAAAAQSQEL QLPPGFRFHP TDEELVVHYL CRRCAGLPIS VPIIAEVDLY KHDPWQLPRM ALYGEKEWYF FSPRDRKYPN GSRPNRAAGA
101: GYWKATGADK PVGTPKPVAI KKALVFYAGK APKGDKTNWI MHEYRLADVD RTARKKNNSL RLDDWVLCRI YNKKGALEKP TGAGGRAEAS SQGALGSMSM
201: GSPPEQKPSV LPSATATATA AAGTGYAPLP FSELAAYYEV RPSDSMPRAH GADSSCSGHA LAATSSCGGG GGERPEVQSQ PKIAEWERTF AAGAGPGINP
301: AGSMLGLGGH QLGSAAVGVG LPAGDPLLQD ILTYWGKPY
Best Arabidopsis Sequence Match ( AT1G01720.1 )
(BLAST)
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.