Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr1P22740_001 | |
| GSMUA_Achr4P17470_001 | |
| GSMUA_AchrUn_... |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G08790.1 | GSMUA_Achr1P22740_001 | AT5G35750.1 | 18642946 |
| AT5G08790.1 | GSMUA_Achr4P17470_001 | AT5G35750.1 | 18642946 |
| AT5G08790.1 | GSMUA_AchrUn_... | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 61.31 | 65.88 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 62.77 | 62.77 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 59.85 | 61.19 |
| KXG33829 | Sorghum | nucleus | 63.5 | 59.79 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 63.5 | 59.39 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 63.5 | 59.39 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 62.04 | 58.62 |
| KRH17977 | Soybean | nucleus | 57.3 | 58.58 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 62.77 | 58.31 |
| PGSC0003DMT400023917 | Potato | nucleus | 61.31 | 57.73 |
| Solyc11g017470.1.1 | Tomato | nucleus | 61.31 | 57.73 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 63.14 | 57.67 |
| Bra038663.1-P | Field mustard | nucleus | 52.19 | 57.2 |
| CDY41537 | Canola | nucleus | 52.19 | 57.2 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 62.77 | 57.14 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 61.31 | 57.14 |
| PGSC0003DMT400045294 | Potato | nucleus | 61.68 | 57.09 |
| Solyc06g060230.2.1 | Tomato | nucleus | 61.68 | 57.09 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 53.65 | 56.98 |
| VIT_18s0001g02300.t01 | Wine grape | nucleus | 62.04 | 56.86 |
| CDX84443 | Canola | nucleus | 52.19 | 56.75 |
| AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 52.19 | 56.52 |
| Bra033239.1-P | Field mustard | nucleus | 58.76 | 56.49 |
| CDX90054 | Canola | nucleus | 58.76 | 56.49 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 54.01 | 56.49 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 54.01 | 56.49 |
| Os01t0884300-01 | Rice | nucleus | 62.41 | 56.44 |
| KRH16387 | Soybean | nucleus | 57.66 | 56.43 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 61.31 | 56.38 |
| KRH63977 | Soybean | nucleus | 59.85 | 56.36 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 61.31 | 56.19 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 61.31 | 56.19 |
| CDY40894 | Canola | nucleus | 53.28 | 56.15 |
| CDY15158 | Canola | nucleus | 58.39 | 55.94 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 52.92 | 55.77 |
| Bra008309.1-P | Field mustard | cytosol, nucleus, plastid | 52.92 | 55.77 |
| AT1G01720.1 | Thale cress | nucleus | 58.39 | 55.36 |
| Bra029201.1-P | Field mustard | cytosol | 53.28 | 55.09 |
| Bra028645.1-P | Field mustard | nucleus | 55.84 | 55.04 |
| KRH59618 | Soybean | nucleus | 59.85 | 55.03 |
| KRH53959 | Soybean | nucleus | 59.12 | 54.92 |
| CDY31350 | Canola | nucleus | 52.92 | 54.72 |
| KRH64668 | Soybean | nucleus | 59.85 | 54.67 |
| KRH53247 | Soybean | nucleus | 59.49 | 54.52 |
| CDX81120 | Canola | nucleus | 47.81 | 54.36 |
| CDY21567 | Canola | nucleus | 55.11 | 54.32 |
| Bra006015.1-P | Field mustard | cytosol, nucleus, plastid | 55.47 | 54.29 |
| Bra009370.1-P | Field mustard | nucleus | 54.74 | 53.96 |
| CDX69919 | Canola | nucleus | 54.74 | 53.96 |
| AT5G08790.1 | Thale cress | nucleus | 55.11 | 53.36 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 63.14 | 51.95 |
| Solyc04g009440.2.1 | Tomato | nucleus | 56.93 | 51.83 |
| PGSC0003DMT400082472 | Potato | nucleus | 56.57 | 51.16 |
| Zm00001d038221_P001 | Maize | plastid | 62.77 | 50.74 |
| GSMUA_Achr7P21770_001 | Banana | nucleus | 36.5 | 50.0 |
| KXG22031 | Sorghum | nucleus | 62.04 | 49.85 |
| CDX84050 | Canola | nucleus | 34.67 | 49.22 |
| CDY39846 | Canola | mitochondrion | 52.55 | 48.98 |
| GSMUA_Achr4P02390_001 | Banana | nucleus | 45.26 | 46.97 |
| AT5G63790.2 | Thale cress | cytosol | 55.11 | 46.89 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 45.62 | 43.1 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 42.34 | 42.96 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 45.62 | 41.95 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 42.7 | 39.93 |
| GSMUA_Achr10P... | Banana | cytosol | 43.07 | 38.82 |
| GSMUA_Achr10P... | Banana | nucleus | 40.51 | 36.76 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.97 | 35.17 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 41.61 | 34.97 |
| GSMUA_Achr4P02380_001 | Banana | nucleus | 41.24 | 33.83 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 43.43 | 33.15 |
| GSMUA_Achr6P32320_001 | Banana | nucleus | 40.51 | 32.17 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 29.93 | 31.3 |
| GSMUA_Achr3P18010_001 | Banana | nucleus | 41.97 | 31.25 |
| GSMUA_Achr5P17060_001 | Banana | nucleus | 32.12 | 31.21 |
| GSMUA_Achr5P19060_001 | Banana | nucleus | 27.74 | 31.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.2 | 30.65 |
| GSMUA_Achr11P... | Banana | nucleus | 29.2 | 30.53 |
| GSMUA_Achr1P02710_001 | Banana | nucleus | 30.29 | 30.51 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 27.74 | 30.4 |
| GSMUA_Achr10P... | Banana | cytosol | 29.2 | 29.96 |
| GSMUA_Achr11P... | Banana | nucleus | 34.67 | 29.87 |
| GSMUA_Achr9P04960_001 | Banana | nucleus | 42.7 | 29.47 |
| GSMUA_Achr10P... | Banana | nucleus | 34.31 | 28.75 |
| GSMUA_Achr7P04030_001 | Banana | nucleus | 28.47 | 27.37 |
| GSMUA_Achr1P18110_001 | Banana | cytosol, nucleus, plastid | 21.53 | 27.19 |
| GSMUA_Achr3P14720_001 | Banana | nucleus | 28.47 | 26.99 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 28.1 | 26.83 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 29.93 | 26.71 |
| GSMUA_Achr11P... | Banana | nucleus | 32.48 | 26.57 |
| GSMUA_Achr10P... | Banana | nucleus | 32.85 | 26.55 |
| GSMUA_Achr3P00560_001 | Banana | nucleus | 27.01 | 26.52 |
| GSMUA_Achr7P23650_001 | Banana | nucleus | 33.58 | 26.44 |
| GSMUA_Achr3P21690_001 | Banana | nucleus | 34.31 | 26.4 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 28.83 | 25.99 |
| GSMUA_Achr6P02680_001 | Banana | nucleus | 33.94 | 24.16 |
| GSMUA_Achr10P... | Banana | cytosol | 31.39 | 20.38 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G25380_001 |
| EnsemblPlants:GSMUA_Achr6P25380_001 | EnsemblPlants:GSMUA_Achr6T25380_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0TA34 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 | PANTHER:PTHR31719:SF16 | SUPFAM:SSF101941 |
| UniParc:UPI000296CEAC | : | : | : | : | : |
Description
NAC domain-containing protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G25380_001]
Coordinates
chr6:+:26468034..26469379
Molecular Weight (calculated)
30969.7 Da
IEP (calculated)
8.345
GRAVY (calculated)
-0.603
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGGDLALPA GFRFHPTDEE LVTHYLCRKC AAMPISVPVV AEVDLYKYDP WQLPGMASYG EKEWYFFSPR DRKYPNGSRP NRAAGSGYWK ATGADKPIGT
101: PRTVAIKKAL VFYSGKAPKG TKTNWIMHEY RLAHPDRSAT KKTNNSLRLD DWVLCRIYHK KGEIDPGRRS IESKARPWVE PKREATWQVT AAAPPPMTDL
201: LYLDAPESLP VLVGASSCSE HADLTCEREV QSLPRWGEDW ESGRWFGINN EHVPLSPSCG DPLQDIFTYL QKPF
101: PRTVAIKKAL VFYSGKAPKG TKTNWIMHEY RLAHPDRSAT KKTNNSLRLD DWVLCRIYHK KGEIDPGRRS IESKARPWVE PKREATWQVT AAAPPPMTDL
201: LYLDAPESLP VLVGASSCSE HADLTCEREV QSLPRWGEDW ESGRWFGINN EHVPLSPSCG DPLQDIFTYL QKPF
001: MKSELNLPAG FRFHPTDEEL VKFYLCRKCA SEQISAPVIA EIDLYKFNPW ELPEMSLYGE KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
Arabidopsis Description
NAC081Protein ATAF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.