Factsheet for GSMUA_Achr4P02390_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P21780_001	Banana	nucleus	84.47	74.83
GSMUA_Achr4P10310_001	Banana	nucleus	76.52	68.94
HORVU3Hr1G094170.1	Barley	nucleus	31.06	64.57
GSMUA_Achr10P...	Banana	cytosol	70.45	61.18
GSMUA_Achr5P07590_001	Banana	nucleus	66.29	60.34
VIT_06s0004g00020.t01	Wine grape	nucleus	62.88	55.89
Zm00001d012527_P001	Maize	cytosol, mitochondrion, nucleus	62.12	53.25
TraesCS3B01G371200.1	Wheat	nucleus	62.12	52.56
Os01t0816100-01	Rice	nucleus	63.26	52.52
TraesCS6B01G075200.1	Wheat	nucleus	56.44	52.28
TraesCS3A01G339600.1	Wheat	nucleus	62.12	52.23
Os07t0225300-01	Rice	nucleus	54.55	52.17
EES03797	Sorghum	nucleus	62.12	51.9
TraesCS3D01G333100.1	Wheat	nucleus	61.74	51.58
GSMUA_Achr7P21770_001	Banana	nucleus	39.02	51.5
Zm00001d034601_P001	Maize	nucleus	60.23	50.96
TraesCS6A01G057400.1	Wheat	nucleus	55.68	50.69
EER96087	Sorghum	nucleus	55.68	50.69
HORVU4Hr1G089660.1	Barley	cytosol, nucleus	43.56	50.66
GSMUA_Achr6P32330_001	Banana	cytosol	51.14	50.0
Os03t0815100-01	Rice	nucleus	59.85	50.0
Zm00001d019207_P001	Maize	nucleus	56.06	49.33
EER93215	Sorghum	nucleus	59.47	49.22
Zm00001d005208_P001	Maize	nucleus	56.44	49.17
TraesCS5B01G480900.2	Wheat	nucleus	60.61	48.93
TraesCS5D01G481200.1	Wheat	nucleus	60.23	48.92
TraesCS5A01G468300.1	Wheat	nucleus	60.23	48.62
HORVU5Hr1G111590.2	Barley	nucleus	60.23	48.18
GSMUA_Achr10P...	Banana	nucleus	45.45	47.06
GSMUA_Achr6P25380_001	Banana	nucleus	46.97	45.26
HORVU2Hr1G004130.1	Barley	cytosol, nucleus	47.73	45.0
GSMUA_Achr6P18720_001	Banana	nucleus	46.59	44.89
GSMUA_Achr7P23250_001	Banana	nucleus	45.08	44.4
GSMUA_Achr6P17720_001	Banana	nucleus	47.73	43.45
Zm00001d013003_P001	Maize	nucleus, plastid	59.47	42.78
TraesCS6D01G059300.1	Wheat	nucleus, plastid	56.44	42.21
GSMUA_Achr3P18990_001	Banana	plastid	47.73	37.84
GSMUA_Achr9P19520_001	Banana	nucleus	44.7	36.2
GSMUA_Achr10P...	Banana	nucleus	41.29	36.09
GSMUA_Achr4P02380_001	Banana	nucleus	45.08	35.63
GSMUA_AchrUn_...	Banana	nucleus	43.18	34.86
GSMUA_Achr6P32320_001	Banana	nucleus	43.56	33.33
GSMUA_Achr1P08860_001	Banana	nucleus	44.32	32.59
GSMUA_Achr3P18010_001	Banana	nucleus	44.32	31.79
GSMUA_Achr7P00860_001	Banana	nucleus	31.44	31.68
GSMUA_Achr5P19060_001	Banana	nucleus	28.79	31.15
GSMUA_Achr10P...	Banana	cytosol	30.68	30.34
GSMUA_Achr11P...	Banana	nucleus	29.55	29.77
GSMUA_Achr4P23030_001	Banana	nucleus	28.03	29.6
GSMUA_Achr4P32010_001	Banana	nucleus	31.82	29.27
GSMUA_AchrUn_...	Banana	nucleus	28.79	29.12
GSMUA_Achr1P02710_001	Banana	nucleus	29.55	28.68
GSMUA_Achr5P17060_001	Banana	nucleus	30.3	28.37
GSMUA_Achr7P04030_001	Banana	nucleus	30.3	28.07
GSMUA_Achr9P10040_001	Banana	nucleus	32.2	27.96
GSMUA_Achr9P04960_001	Banana	nucleus	42.05	27.96
GSMUA_Achr11P...	Banana	nucleus	33.33	27.67
GSMUA_Achr3P00560_001	Banana	nucleus	29.17	27.6
GSMUA_Achr10P...	Banana	nucleus	34.09	27.52
GSMUA_Achr1P18110_001	Banana	cytosol, nucleus, plastid	22.35	27.19
GSMUA_Achr5P02170_001	Banana	nucleus	31.06	26.71
GSMUA_Achr3P14720_001	Banana	nucleus	29.17	26.64
GSMUA_Achr11P...	Banana	nucleus	32.2	25.37
GSMUA_Achr3P21690_001	Banana	nucleus	33.71	25.0
GSMUA_Achr10P...	Banana	nucleus	31.82	24.78
GSMUA_Achr7P23650_001	Banana	nucleus	32.58	24.71
GSMUA_Achr6P02680_001	Banana	nucleus	33.71	23.12
GSMUA_Achr10P...	Banana	cytosol	31.82	19.91

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr4G02390_001
EnsemblPlants:GSMUA_Achr4P02390_001	EnsemblPlants:GSMUA_Achr4T02390_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0SKF6	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31719	PANTHER:PTHR31719:SF80	SUPFAM:SSF101941
UniParc:UPI0002949385	:	:	:	:	:

Description

NAC protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G02390_001]

Coordinates

chr4:+:2120662..2122036

Molecular Weight (calculated)

30283.5 Da

IEP (calculated)

8.276

GRAVY (calculated)

-0.788

Length

264 amino acids

Sequence
(BLAST)

001: MGRTRDAEAE LNLPPGFRFH PTDEELVVHY LCRKTACQCQ PVPIIAEIDL YKYEPWELPD KALFGNREWY FFTPRDRKYP NGSRPNRAAG KGYWKATGAD
101: KPISPKGSNR TVGIKKALVF YSGKAPKGVK TDWIMHEYRL ADVNRSANKG SLRLDNWVLC RLYNKKNTWE KTKMQKQEET SFGETMQSVD DALSDSFRTP
201: ESDVENEVVL PDFDDLGYLS QASTGSSYTN FGSTPISDAT NQDYYFQSFV SPLLRPNHTN MRQF

Best Arabidopsis Sequence Match ( AT1G01720.1 )
(BLAST)

001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY

Arabidopsis Description

NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.