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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d034601_P001 Maize nucleus 91.85 93.91
Os03t0815100-01 Rice nucleus 84.64 85.44
TraesCS5D01G481200.1 Wheat nucleus 77.43 76.0
TraesCS5B01G480900.2 Wheat nucleus 77.43 75.54
TraesCS5A01G468300.1 Wheat nucleus 77.43 75.54
HORVU5Hr1G111590.2 Barley nucleus 77.43 74.85
Zm00001d013003_P001 Maize nucleus, plastid 82.13 71.39
EER96087 Sorghum nucleus 60.19 66.21
GSMUA_Achr5P07590_001 Banana nucleus 55.17 60.69
GSMUA_Achr4P02390_001 Banana nucleus 49.22 59.47
GSMUA_Achr7P21780_001 Banana nucleus 52.98 56.71
GSMUA_Achr4P10310_001 Banana nucleus 51.1 55.63
VIT_06s0004g00020.t01 Wine grape nucleus 50.78 54.55
EES03797 Sorghum nucleus 53.92 54.43
GSMUA_Achr10P... Banana cytosol 50.47 52.96
GSMUA_Achr6P32330_001 Banana cytosol 43.26 51.11
KXG33829 Sorghum nucleus 41.07 45.02
KXG22031 Sorghum nucleus 40.75 38.12
OQU83033 Sorghum nucleus 40.44 33.59
EER99985 Sorghum nucleus 34.17 30.79
KXG32136 Sorghum plastid 36.05 30.26
EER92326 Sorghum nucleus 35.74 30.0
EER99924 Sorghum cytosol, nucleus, plastid 35.42 29.12
OQU90111 Sorghum nucleus 37.93 28.95
EES07907 Sorghum plastid 35.74 28.36
EES17466 Sorghum nucleus 26.02 27.3
EES16571 Sorghum nucleus 35.74 26.57
EER92917 Sorghum nucleus 26.96 26.3
EER95852 Sorghum nucleus 27.27 25.36
EES13251 Sorghum mitochondrion, nucleus 26.96 22.99
EER93360 Sorghum nucleus 26.65 22.97
EES07261 Sorghum nucleus 27.59 22.68
KXG20943 Sorghum nucleus, plastid 26.33 21.76
OQU89481 Sorghum nucleus 27.27 21.59
EES13897 Sorghum nucleus 25.71 21.35
EES19541 Sorghum nucleus 27.59 21.0
EES01882 Sorghum nucleus 27.27 19.68
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150EntrezGene:8057074ProteinID:AQY17415.1UniProt:C5WVY8EnsemblPlants:EER93215
ProteinID:EER93215ProteinID:EER93215.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009628GO:GO:0009987GO:GO:0042803GO:GO:0043565GO:GO:1901002GO:GO:1902584
InterPro:IPR003441InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sfPFAM:PF02365PFscan:PS51005
PANTHER:PTHR31719PANTHER:PTHR31719:SF80EnsemblPlantsGene:SORBI_3001G040200SUPFAM:SSF101941unigene:Sbi.15189UniParc:UPI0001A829F5
RefSeq:XP_002466217.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:-:2987435..2989263
Molecular Weight (calculated)
35424.7 Da
IEP (calculated)
6.522
GRAVY (calculated)
-0.604
Length
319 amino acids
Sequence
(BLAST)
001: MGLPVMRRER DAEAELNLPP GFRFHPTDDE LVEHYLCRKA AGQRLPVPII AEVDLYKFDP WDLPERALFG VREWYFFTPR DRKYPNGSRP NRAAGNGYWK
101: ATGADKPVAP RGRTLGIKKA LVFYAGKAPR GVKTDWIMHE YRLADAGRAA ASKKGSLRLD DWVLCRLYNK KNEWEKMQLG KESAAGVGTA KEEAMDMTTS
201: HSHSHSQSHS HSWGETRTPE SEIVDNDPFP ELDSFPAFQD PAAAMMMVPK KEQVDDGSAA ANAAKSSDLF VDLSYDDIQG MYSGLDMLPP PGEDFFSSLF
301: ASPRVKGNQP AGAAGLGPF
Best Arabidopsis Sequence Match ( AT5G63790.2 )
(BLAST)
001: MNLPFVYKSS MDFALFSSIS IFEINHKDPP IRRFIKTQNR ILSTRKQQGT FPKMKAELNL PAGFRFHPTD EELVKFYLCR RCASEPINVP VIAEIDLYKF
101: NPWELPEMAL YGEKEWYFFS HRDRKYPNGS RPNRAAGTGY WKATGADKPI GKPKTLGIKK ALVFYAGKAP KGIKTNWIMH EYRLANVDRS ASTNKKNNLR
201: LDDWVLCRIY NKKGTMEKYL PAAAEKPTEK MSTSDSRCSS HVISPDVTCS DNWEVESEPK WINLEDALEA FNDDTSMFSS IGLLQNDAFV PQFQYQSSDF
301: VDSFQDPFEQ KPFLNWNFAP QG
Arabidopsis Description
ANAC102NAC domain containing protein 102 [Source:TAIR;Acc:AT5G63790]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.