CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0126900-01	Rice	nucleus	31.24	78.36
Os12t0123700-01	Rice	nucleus	57.34	62.6
EES07907	Sorghum	plastid	55.94	59.7
TraesCS5A01G143200.1	Wheat	nucleus	48.25	57.66
TraesCS5D01G148800.1	Wheat	nucleus	47.55	57.63
TraesCS5B01G142100.1	Wheat	nucleus	47.32	57.34
Zm00001d023294_P001	Maize	nucleus	62.0	56.0
HORVU5Hr1G045650.7	Barley	plastid	47.32	49.63
EER96087	Sorghum	nucleus	27.04	40.0
KXG33829	Sorghum	nucleus	26.34	38.83
KXG32136	Sorghum	plastid	33.33	37.63
EER93215	Sorghum	nucleus	26.57	35.74
EER99924	Sorghum	cytosol, nucleus, plastid	31.93	35.31
EES03797	Sorghum	nucleus	25.64	34.81
EER92326	Sorghum	nucleus	30.54	34.47
KXG22031	Sorghum	nucleus	25.87	32.55
OQU90111	Sorghum	nucleus	31.7	32.54
EER99985	Sorghum	nucleus	26.11	31.64
OQU83033	Sorghum	nucleus	25.41	28.39
EER92917	Sorghum	nucleus	19.81	25.99
EES17466	Sorghum	nucleus	17.95	25.33
EER95852	Sorghum	nucleus	19.11	23.91
EER93360	Sorghum	nucleus	20.28	23.51
EES07261	Sorghum	nucleus	20.51	22.68
OQU89481	Sorghum	nucleus	20.75	22.08
EES13897	Sorghum	nucleus	19.35	21.61
EES13251	Sorghum	mitochondrion, nucleus	18.18	20.86
KXG20943	Sorghum	nucleus, plastid	18.41	20.47
EES19541	Sorghum	nucleus	19.11	19.57
EES01882	Sorghum	nucleus	19.58	19.0

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8067141	UniProt:C5YR27	EnsemblPlants:EES16571	ProteinID:EES16571
ProteinID:EES16571.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR45430	EnsemblPlantsGene:SORBI_3008G021800
SUPFAM:SSF101941	unigene:Sbi.19026	UniParc:UPI0001A88448	RefSeq:XP_002442733.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:1907267..1909519

Molecular Weight (calculated)

46663.3 Da

IEP (calculated)

6.130

GRAVY (calculated)

-0.527

Length

429 amino acids

Sequence
(BLAST)

001: MASGGGSSSR VPGGGGNLNL PAGFRFHPTD EELIVHYLMN QAASIPCPVP IIAEVNIYQC NPWDLPAKAL FGENEWYFFS PRDRKYPNGV RPNRAAGSGY
101: WKATGTDKAI LSTPTSQNIG VKKALVFYGG RPPKGVKTDW IMHEYRLTGG TTAAAADDKN SSIKRRSGSS MRLDDWVLCR IHKKSNDFQL SDQEQEKEGS
201: TVEELDTLAN TTNTDNSMND STETTTLGHH DQLRHETAAM TTMSKSCSLT DLLNSIDYAS LSQMFLDIPA EAEEPAQQQS TPLIYPPATQ TTHQAALTSN
301: NNYDNNVMNN SNLPIAAVDA VIAGSDNSGV KKRNKRVMAV DGAAAESCFD DGSSDSFSSK KLKLPSDSRI AGHFGTTASS YYYCNNQLQL VDSAMSSGFH
401: QYSSLLLSSS NPFLSQQQQL LLNSHIGMQ

Best Arabidopsis Sequence Match ( AT1G61110.1 )
(BLAST)

001: MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS

Arabidopsis Description

NAC025NAC transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY42]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.