Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G148800.1 | Wheat | nucleus | 96.94 | 98.31 |
| TraesCS5B01G142100.1 | Wheat | nucleus | 96.1 | 97.46 |
| HORVU5Hr1G045650.7 | Barley | plastid | 94.71 | 83.13 |
| Os11t0126900-01 | Rice | nucleus | 37.05 | 77.78 |
| Os12t0123700-01 | Rice | nucleus | 64.07 | 58.52 |
| EES07907 | Sorghum | plastid | 57.94 | 51.74 |
| EES16571 | Sorghum | nucleus | 57.66 | 48.25 |
| Zm00001d023294_P001 | Maize | nucleus | 55.15 | 41.68 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 31.48 | 38.57 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 31.2 | 37.46 |
| TraesCS3A01G162900.1 | Wheat | cytosol | 31.75 | 37.01 |
| TraesCS6A01G057400.1 | Wheat | nucleus | 29.8 | 36.9 |
| TraesCS3A01G078400.1 | Wheat | nucleus | 36.21 | 36.83 |
| TraesCS4A01G131000.1 | Wheat | nucleus | 36.21 | 36.72 |
| TraesCS2A01G101900.1 | Wheat | nucleus | 35.38 | 36.49 |
| TraesCS3A01G339600.1 | Wheat | nucleus | 31.75 | 36.31 |
| TraesCS2A01G102000.1 | Wheat | nucleus | 35.93 | 36.13 |
| TraesCS5A01G468300.1 | Wheat | nucleus | 31.75 | 34.86 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 39.0 | 34.4 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 38.72 | 33.41 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 30.36 | 32.54 |
| TraesCS7A01G549000.1 | Wheat | cytosol, nucleus, plastid | 21.45 | 25.93 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 23.68 | 24.78 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 24.23 | 24.72 |
| TraesCS5A01G500400.1 | Wheat | nucleus | 23.4 | 24.14 |
| TraesCS5A01G500500.1 | Wheat | nucleus | 22.56 | 23.96 |
| TraesCS5A01G500700.1 | Wheat | nucleus | 23.12 | 23.31 |
| TraesCS6A01G307200.1 | Wheat | nucleus | 25.07 | 23.14 |
| TraesCS5A01G228000.1 | Wheat | nucleus | 25.35 | 23.1 |
| TraesCS5A01G500600.1 | Wheat | nucleus | 23.12 | 22.49 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 23.4 | 22.28 |
| TraesCS1A01G261800.1 | Wheat | nucleus | 24.23 | 22.19 |
| TraesCS5A01G339600.1 | Wheat | nucleus | 23.4 | 22.05 |
| TraesCS2A01G063200.1 | Wheat | nucleus | 23.68 | 21.96 |
| TraesCS2A01G063300.1 | Wheat | nucleus | 23.12 | 21.78 |
| TraesCS2A01G063400.1 | Wheat | nucleus | 16.71 | 21.35 |
| TraesCS7A01G318500.1 | Wheat | nucleus | 22.56 | 20.88 |
| TraesCS3A01G403300.1 | Wheat | nucleus | 22.84 | 19.9 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G143200.1 | EnsemblPlantsGene:TraesCS5A01G143200 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR45430 |
| PFAM:PF02365 | PFscan:PS51005 | SEG:seg | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr5A:-:317246647..317248407
Molecular Weight (calculated)
40028.8 Da
IEP (calculated)
6.646
GRAVY (calculated)
-0.675
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMGSSSAAM PALPPGFRFH PTDEELIVHY LGRQAASMPS PVPIIAEVNI YKCNPWDLPG KALFGENEWY FFSPRDRKYP NGARPNRAAG SGYWKATGTD
101: KAILSTPANE SIGVKKALVF YRGKPPKGVK TDWIMHEYRL TAADNRTTKR RGSSMRLDDW VLCRIHKKCN NLHNFSSSDQ EQEHEQESST TVEDSHNNHT
201: VSSPKSEAFD GDGDDQLQLQ QFRPMAIAKS CSLTDLLNTV DYAALSHLLL DGAGAGASSS DAGADYQLPP ENPLIYSQPP WQQTLHYNNN NNGYVNIDTI
301: DVPQIPEARV DDYGMNGDRY NGMKRKRSSG SLYCSQLQLP ADQYSGMLIH PFLSQQLHM
101: KAILSTPANE SIGVKKALVF YRGKPPKGVK TDWIMHEYRL TAADNRTTKR RGSSMRLDDW VLCRIHKKCN NLHNFSSSDQ EQEHEQESST TVEDSHNNHT
201: VSSPKSEAFD GDGDDQLQLQ QFRPMAIAKS CSLTDLLNTV DYAALSHLLL DGAGAGASSS DAGADYQLPP ENPLIYSQPP WQQTLHYNNN NNGYVNIDTI
301: DVPQIPEARV DDYGMNGDRY NGMKRKRSSG SLYCSQLQLP ADQYSGMLIH PFLSQQLHM
001: MISKDPRSSL PPGFRFHPTD EELILHYLRK KVSSSPVPLS IIADVDIYKS DPWDLPAKAP FGEKEWYFFS PRDRKYPNGA RPNRAAASGY WKATGTDKLI
101: AVPNGEGFHE NIGIKKALVF YRGKPPKGVK TNWIMHEYRL ADSLSPKRIN SSRSGGSELD DWVLCRIYKK SHASLSSPDV ALVTSNQEHE ENDNEPFVDR
201: GTFLPNLQND QPLKRQKSSC SFSNLLDATD LTFLANFLNE TPENRSESDF SFMIGNFSNP DIYGNHYLDQ KLPQLSSPTS ETSGIGSKRE RVDFAEETIN
301: ASKKMMNTYS YNNSIDQMDH SMMQQPSFLN QELMMSSHLQ YQG
101: AVPNGEGFHE NIGIKKALVF YRGKPPKGVK TNWIMHEYRL ADSLSPKRIN SSRSGGSELD DWVLCRIYKK SHASLSSPDV ALVTSNQEHE ENDNEPFVDR
201: GTFLPNLQND QPLKRQKSSC SFSNLLDATD LTFLANFLNE TPENRSESDF SFMIGNFSNP DIYGNHYLDQ KLPQLSSPTS ETSGIGSKRE RVDFAEETIN
301: ASKKMMNTYS YNNSIDQMDH SMMQQPSFLN QELMMSSHLQ YQG
Arabidopsis Description
NAC047NAC transcription factor 47 [Source:UniProtKB/Swiss-Prot;Acc:Q84TD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.