Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G173600.1 | Wheat | nucleus | 95.2 | 97.4 |
| TraesCS4D01G175700.1 | Wheat | nucleus | 94.07 | 93.28 |
| HORVU4Hr1G051290.1 | Barley | nucleus | 91.53 | 91.27 |
| Os03t0327800-01 | Rice | nucleus | 73.45 | 66.33 |
| GSMUA_Achr7P21770_001 | Banana | nucleus | 35.03 | 62.0 |
| TraesCS2A01G102000.1 | Wheat | nucleus | 55.93 | 55.46 |
| TraesCS2A01G101900.1 | Wheat | nucleus | 53.95 | 54.89 |
| KRH50570 | Soybean | nucleus | 34.75 | 52.79 |
| GSMUA_Achr10P... | Banana | nucleus | 40.96 | 48.01 |
| VIT_01s0026g02710.t01 | Wine grape | nucleus | 37.85 | 47.52 |
| CDY51500 | Canola | nucleus | 36.44 | 47.43 |
| CDY07348 | Canola | nucleus | 36.16 | 47.23 |
| Bra004385.1-P | Field mustard | cytosol | 35.88 | 47.04 |
| CDX95931 | Canola | cytosol | 35.88 | 47.04 |
| CDY40930 | Canola | cytosol | 35.88 | 47.04 |
| AT1G69490.1 | Thale cress | nucleus | 35.31 | 46.64 |
| GSMUA_Achr6P32320_001 | Banana | nucleus | 45.2 | 46.38 |
| KRH70773 | Soybean | cytosol | 36.44 | 46.24 |
| KRH74907 | Soybean | nucleus | 36.44 | 46.24 |
| Solyc04g005610.2.1 | Tomato | nucleus | 35.88 | 46.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.66 | 46.18 |
| GSMUA_Achr4P02380_001 | Banana | nucleus | 43.22 | 45.81 |
| PGSC0003DMT400007341 | Potato | mitochondrion | 36.44 | 45.58 |
| KRG89575 | Soybean | nucleus | 35.88 | 45.36 |
| PGSC0003DMT400047440 | Potato | nucleus | 35.88 | 45.04 |
| Bra003998.1-P | Field mustard | nucleus | 30.23 | 44.77 |
| Solyc05g007770.2.1 | Tomato | nucleus | 35.59 | 44.68 |
| GSMUA_Achr3P18010_001 | Banana | nucleus | 44.63 | 42.93 |
| TraesCS3A01G078400.1 | Wheat | nucleus | 41.24 | 41.36 |
| TraesCS6A01G057400.1 | Wheat | nucleus | 32.2 | 39.31 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 32.49 | 39.25 |
| TraesCS3A01G162900.1 | Wheat | cytosol | 33.9 | 38.96 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 31.92 | 37.79 |
| TraesCS5A01G468300.1 | Wheat | nucleus | 34.75 | 37.61 |
| TraesCS3A01G339600.1 | Wheat | nucleus | 33.33 | 37.58 |
| TraesCS5A01G143200.1 | Wheat | nucleus | 36.72 | 36.21 |
| GSMUA_Achr9P04960_001 | Banana | nucleus | 39.55 | 35.26 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 38.7 | 33.66 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 38.42 | 32.69 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 30.23 | 31.94 |
| TraesCS7A01G549000.1 | Wheat | cytosol, nucleus, plastid | 23.45 | 27.95 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 26.27 | 27.11 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 26.84 | 26.99 |
| TraesCS2A01G063300.1 | Wheat | nucleus | 28.25 | 26.25 |
| TraesCS6A01G307200.1 | Wheat | nucleus | 28.81 | 26.22 |
| TraesCS5A01G339600.1 | Wheat | nucleus | 27.4 | 25.46 |
| TraesCS5A01G228000.1 | Wheat | nucleus | 28.25 | 25.38 |
| TraesCS2A01G063200.1 | Wheat | nucleus | 27.68 | 25.32 |
| TraesCS5A01G500500.1 | Wheat | nucleus | 23.45 | 24.56 |
| TraesCS2A01G063400.1 | Wheat | nucleus | 19.49 | 24.56 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 25.99 | 24.4 |
| TraesCS5A01G500400.1 | Wheat | nucleus | 23.73 | 24.14 |
| TraesCS5A01G500700.1 | Wheat | nucleus | 23.73 | 23.6 |
| TraesCS5A01G500600.1 | Wheat | nucleus | 23.73 | 22.76 |
| TraesCS1A01G261800.1 | Wheat | nucleus | 24.58 | 22.19 |
| TraesCS7A01G318500.1 | Wheat | nucleus | 23.73 | 21.65 |
| TraesCS3A01G403300.1 | Wheat | nucleus | 24.29 | 20.87 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G131000.1 | EnsemblPlantsGene:TraesCS4A01G131000 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR45430 |
| PFAM:PF02365 | PFscan:PS51005 | SUPFAM:SSF101941 | MapMan:15.5.17 | : | : |
Description
No Description!
Coordinates
chr4A:-:174155753..174157495
Molecular Weight (calculated)
38391.6 Da
IEP (calculated)
9.500
GRAVY (calculated)
-0.500
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMSDPAMLP PGFRFHPTDE ELILHYLRNR AAESPCPVSI IADVDIYKFD PWALPSKASY GDREWYFFTP RDRKYPNGVR PNRAAGSGYW KATGTDKPIR
101: CSATGESVGV KKALVFYKGR PPKGIKTNWI MHEYRLAAAD AHAANTYRPM KFRNASMRLD DWVLCRIYKK TSQASPMAVP PLSDHELDEP SGAAGYPMSS
201: AGMIMQGGAG GYPLQAAAGG TQRMPKIPSI SELLNEYSLA QLFEDSGHAL MARHDQHAAL LGHPIMSQFH VNGMPQLGQM DSSASTSVGG EGAAGKRKRP
301: SEDGDRNGST SQPAAAVTGK KPNTSCLGAT TFQTGNNTLQ GSSLGQGHQT LLRF
101: CSATGESVGV KKALVFYKGR PPKGIKTNWI MHEYRLAAAD AHAANTYRPM KFRNASMRLD DWVLCRIYKK TSQASPMAVP PLSDHELDEP SGAAGYPMSS
201: AGMIMQGGAG GYPLQAAAGG TQRMPKIPSI SELLNEYSLA QLFEDSGHAL MARHDQHAAL LGHPIMSQFH VNGMPQLGQM DSSASTSVGG EGAAGKRKRP
301: SEDGDRNGST SQPAAAVTGK KPNTSCLGAT TFQTGNNTLQ GSSLGQGHQT LLRF
001: MEVTSQSTLP PGFRFHPTDE ELIVYYLRNQ TMSKPCPVSI IPEVDIYKFD PWQLPEKTEF GENEWYFFSP RERKYPNGVR PNRAAVSGYW KATGTDKAIH
101: SGSSNVGVKK ALVFYKGRPP KGIKTDWIMH EYRLHDSRKA STKRNGSMRL DEWVLCRIYK KRGASKLLNE QEGFMDEVLM EDETKVVVNE AERRTEEEIM
201: MMTSMKLPRT CSLAHLLEMD YMGPVSHIDN FSQFDHLHQP DSESSWFGDL QFNQDEILNH HRQAMFKF
101: SGSSNVGVKK ALVFYKGRPP KGIKTDWIMH EYRLHDSRKA STKRNGSMRL DEWVLCRIYK KRGASKLLNE QEGFMDEVLM EDETKVVVNE AERRTEEEIM
201: MMTSMKLPRT CSLAHLLEMD YMGPVSHIDN FSQFDHLHQP DSESSWFGDL QFNQDEILNH HRQAMFKF
Arabidopsis Description
NAC029NAP [Source:UniProtKB/TrEMBL;Acc:A0A178W8K0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.