Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G101900.1 | Wheat | nucleus | 84.59 | 86.78 |
| HORVU1Hr1G021800.3 | Barley | cytosol, nucleus | 43.7 | 84.78 |
| HORVU2Hr1G017470.1 | Barley | nucleus | 81.23 | 75.32 |
| GSMUA_Achr7P21770_001 | Banana | nucleus | 35.01 | 62.5 |
| TraesCS4A01G131000.1 | Wheat | nucleus | 55.46 | 55.93 |
| EER92326 | Sorghum | nucleus | 56.58 | 53.16 |
| Zm00001d028999_P001 | Maize | nucleus | 54.62 | 52.28 |
| KRH50570 | Soybean | nucleus | 33.33 | 51.07 |
| VIT_01s0026g02710.t01 | Wine grape | nucleus | 37.53 | 47.52 |
| GSMUA_Achr10P... | Banana | nucleus | 39.5 | 46.69 |
| CDY07348 | Canola | nucleus | 35.29 | 46.49 |
| GSMUA_Achr6P32320_001 | Banana | nucleus | 44.82 | 46.38 |
| CDY51500 | Canola | nucleus | 35.29 | 46.32 |
| Bra004385.1-P | Field mustard | cytosol | 35.01 | 46.3 |
| CDX95931 | Canola | cytosol | 35.01 | 46.3 |
| CDY40930 | Canola | cytosol | 35.01 | 46.3 |
| AT1G69490.1 | Thale cress | nucleus | 34.73 | 46.27 |
| GSMUA_Achr4P02380_001 | Banana | nucleus | 42.86 | 45.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.46 | 45.26 |
| KRH74907 | Soybean | nucleus | 35.01 | 44.8 |
| Solyc04g005610.2.1 | Tomato | nucleus | 34.45 | 44.73 |
| PGSC0003DMT400007341 | Potato | mitochondrion | 35.29 | 44.52 |
| KRH70773 | Soybean | cytosol | 34.73 | 44.44 |
| PGSC0003DMT400047440 | Potato | nucleus | 35.01 | 44.33 |
| Solyc05g007770.2.1 | Tomato | nucleus | 34.45 | 43.62 |
| Bra003998.1-P | Field mustard | nucleus | 29.13 | 43.51 |
| KRG89575 | Soybean | nucleus | 33.89 | 43.21 |
| GSMUA_Achr3P18010_001 | Banana | nucleus | 44.26 | 42.93 |
| TraesCS3A01G078400.1 | Wheat | nucleus | 41.74 | 42.21 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 33.33 | 40.61 |
| TraesCS3A01G162900.1 | Wheat | cytosol | 34.45 | 39.94 |
| TraesCS6A01G057400.1 | Wheat | nucleus | 31.93 | 39.31 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 32.77 | 39.13 |
| TraesCS3A01G339600.1 | Wheat | nucleus | 33.89 | 38.53 |
| TraesCS5A01G468300.1 | Wheat | nucleus | 33.33 | 36.39 |
| TraesCS5A01G143200.1 | Wheat | nucleus | 36.13 | 35.93 |
| GSMUA_Achr9P04960_001 | Banana | nucleus | 39.22 | 35.26 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 31.37 | 33.43 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 37.25 | 32.68 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 36.41 | 31.25 |
| TraesCS7A01G549000.1 | Wheat | cytosol, nucleus, plastid | 22.41 | 26.94 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 25.21 | 26.24 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 25.21 | 25.57 |
| TraesCS6A01G307200.1 | Wheat | nucleus | 26.89 | 24.68 |
| TraesCS5A01G500500.1 | Wheat | nucleus | 22.97 | 24.26 |
| TraesCS2A01G063300.1 | Wheat | nucleus | 25.77 | 24.15 |
| TraesCS5A01G500700.1 | Wheat | nucleus | 23.81 | 23.88 |
| TraesCS5A01G500400.1 | Wheat | nucleus | 23.25 | 23.85 |
| TraesCS2A01G063200.1 | Wheat | nucleus | 25.77 | 23.77 |
| TraesCS5A01G339600.1 | Wheat | nucleus | 25.21 | 23.62 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 24.65 | 23.34 |
| TraesCS5A01G500600.1 | Wheat | nucleus | 23.81 | 23.04 |
| TraesCS5A01G228000.1 | Wheat | nucleus | 25.21 | 22.84 |
| TraesCS2A01G063400.1 | Wheat | nucleus | 17.93 | 22.78 |
| TraesCS1A01G261800.1 | Wheat | nucleus | 23.53 | 21.43 |
| TraesCS7A01G318500.1 | Wheat | nucleus | 22.97 | 21.13 |
| TraesCS3A01G403300.1 | Wheat | nucleus | 23.53 | 20.39 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G102000.1 | EnsemblPlantsGene:TraesCS2A01G102000 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR45430 |
| PFAM:PF02365 | PFscan:PS51005 | SEG:seg | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr2A:-:54953849..54955519
Molecular Weight (calculated)
38399.0 Da
IEP (calculated)
7.032
GRAVY (calculated)
-0.418
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAQGQGQG AATSLPPGFR FHPTDEELIL HYLRNRAAAA PCPVSIIADV DIYKFDPWDL PSQAVYGDCE WYFFSPRDRK YPNGIRPNRA AGSGYWKATG
101: TDKPIHDPAT GQGVGVKKAL VFYKGRPPKG TKTAWIMHEY RLAADPLTTA VNTYKPIKFR NVSMRLDDWV LCRIYKKTGL ASPMVPPLSD YDHMADHDDL
201: SGGGGTFDDA ACSFYAHSSS SSSASRTMIT QQPPHAGGLP TIPSFSELFD DYSLAQILDA EAEHGATHHL AVHPSLNMLL PVGDNAHGVQ PSYYAPSSSS
301: PDASGGSAGK RKAASPEESS AKRLNGSCFD APPQSANSWQ GAASVLGGLG HQMLPQF
101: TDKPIHDPAT GQGVGVKKAL VFYKGRPPKG TKTAWIMHEY RLAADPLTTA VNTYKPIKFR NVSMRLDDWV LCRIYKKTGL ASPMVPPLSD YDHMADHDDL
201: SGGGGTFDDA ACSFYAHSSS SSSASRTMIT QQPPHAGGLP TIPSFSELFD DYSLAQILDA EAEHGATHHL AVHPSLNMLL PVGDNAHGVQ PSYYAPSSSS
301: PDASGGSAGK RKAASPEESS AKRLNGSCFD APPQSANSWQ GAASVLGGLG HQMLPQF
001: MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS
Arabidopsis Description
NAC025NAC transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY42]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.