Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G075200.1 | Wheat | nucleus | 91.72 | 93.33 |
| HORVU3Hr1G094170.1 | Barley | nucleus | 37.59 | 85.83 |
| HORVU2Hr1G004130.1 | Barley | cytosol, nucleus | 77.59 | 80.36 |
| TraesCS6D01G059300.1 | Wheat | nucleus, plastid | 92.07 | 75.64 |
| HORVU4Hr1G089660.1 | Barley | cytosol, nucleus | 56.21 | 71.81 |
| Os07t0225300-01 | Rice | nucleus | 68.28 | 71.74 |
| EER96087 | Sorghum | nucleus | 69.66 | 69.66 |
| Zm00001d019207_P001 | Maize | nucleus | 69.66 | 67.33 |
| Zm00001d005208_P001 | Maize | nucleus | 69.66 | 66.67 |
| GSMUA_Achr4P02390_001 | Banana | nucleus | 50.69 | 55.68 |
| TraesCS5A01G468300.1 | Wheat | nucleus | 60.34 | 53.52 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 53.1 | 53.1 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 53.45 | 52.01 |
| VIT_06s0004g00020.t01 | Wine grape | nucleus | 53.1 | 51.85 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 51.38 | 50.85 |
| TraesCS3A01G339600.1 | Wheat | nucleus | 54.83 | 50.64 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 42.76 | 45.93 |
| GSMUA_Achr10P... | Banana | cytosol | 47.93 | 45.72 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 41.72 | 41.3 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 41.72 | 40.47 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 40.34 | 34.93 |
| TraesCS3A01G162900.1 | Wheat | cytosol | 35.52 | 33.44 |
| TraesCS4A01G131000.1 | Wheat | nucleus | 39.31 | 32.2 |
| TraesCS2A01G101900.1 | Wheat | nucleus | 38.62 | 32.18 |
| TraesCS2A01G102000.1 | Wheat | nucleus | 39.31 | 31.93 |
| TraesCS3A01G078400.1 | Wheat | nucleus | 37.93 | 31.16 |
| TraesCS5A01G143200.1 | Wheat | nucleus | 36.9 | 29.8 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 41.03 | 29.24 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 41.03 | 28.61 |
| TraesCS7A01G549000.1 | Wheat | cytosol, nucleus, plastid | 28.62 | 27.95 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 28.62 | 24.2 |
| TraesCS5A01G500500.1 | Wheat | nucleus | 27.93 | 23.96 |
| TraesCS6A01G307200.1 | Wheat | nucleus | 31.72 | 23.65 |
| TraesCS5A01G500400.1 | Wheat | nucleus | 28.28 | 23.56 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 28.28 | 23.3 |
| TraesCS1A01G261800.1 | Wheat | nucleus | 30.69 | 22.7 |
| TraesCS2A01G063300.1 | Wheat | nucleus | 29.66 | 22.57 |
| TraesCS5A01G500700.1 | Wheat | nucleus | 27.59 | 22.47 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 28.62 | 22.02 |
| TraesCS2A01G063200.1 | Wheat | nucleus | 28.97 | 21.71 |
| TraesCS5A01G500600.1 | Wheat | nucleus | 27.59 | 21.68 |
| TraesCS5A01G228000.1 | Wheat | nucleus | 29.31 | 21.57 |
| TraesCS5A01G339600.1 | Wheat | nucleus | 27.93 | 21.26 |
| TraesCS7A01G318500.1 | Wheat | nucleus | 28.28 | 21.13 |
| TraesCS3A01G403300.1 | Wheat | nucleus | 28.97 | 20.39 |
| TraesCS2A01G063400.1 | Wheat | nucleus | 19.31 | 19.93 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31719 | PANTHER:PTHR31719:SF80 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS6A01G057400 | EnsemblPlants:TraesCS6A01G057400.1 | SEG:seg |
Description
No Description!
Coordinates
chr6A:-:30190137..30191252
Molecular Weight (calculated)
32436.2 Da
IEP (calculated)
4.903
GRAVY (calculated)
-0.539
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMAAEGRRG DAEAELNLPP GFRFHPTDEE LVADYLCARA AGRAPPVPII AELDLYRFDP WELPERALFG AREWYFFTPR DRKYPNGSRP SRAAGGGYWK
101: ATGADRPVAR AGRTLGIKKA LVFYHGRPAA GVKTDWIMHE YRLAGAAAKR DGASLRLDDW VLCRLYNKKN QWEKMQRQRQ EEEEAAAKAA ASQSTSWGET
201: RTPESDVDNG PFPELDSLPE FQGMGTTNAA ILPKEEVREL GNDDWLMGIS LDDLQGPGSL MLPWDDSYAA SFLSPVAVMK MEQDVSPFFF
101: ATGADRPVAR AGRTLGIKKA LVFYHGRPAA GVKTDWIMHE YRLAGAAAKR DGASLRLDDW VLCRLYNKKN QWEKMQRQRQ EEEEAAAKAA ASQSTSWGET
201: RTPESDVDNG PFPELDSLPE FQGMGTTNAA ILPKEEVREL GNDDWLMGIS LDDLQGPGSL MLPWDDSYAA SFLSPVAVMK MEQDVSPFFF
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.