Factsheet for Os07t0225300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

nucleus: 15276429

msms PMID: 15276429 doi

MM Khan, S Komatsu

Department of Molecular Genetics, National Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba 305-8602, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G094170.1	Barley	nucleus	32.61	70.87
TraesCS6B01G075200.1	Wheat	nucleus	72.46	70.18
EER96087	Sorghum	nucleus	72.46	68.97
Zm00001d019207_P001	Maize	nucleus	74.28	68.33
TraesCS6A01G057400.1	Wheat	nucleus	71.74	68.28
Zm00001d005208_P001	Maize	nucleus	72.1	65.68
HORVU2Hr1G004130.1	Barley	cytosol, nucleus	61.96	61.07
Os03t0815100-01	Rice	nucleus	67.03	58.54
HORVU4Hr1G089660.1	Barley	cytosol, nucleus	47.46	57.71
TraesCS6D01G059300.1	Wheat	nucleus, plastid	72.46	56.66
Os11t0126900-01	Rice	nucleus	34.06	54.97
GSMUA_Achr4P02390_001	Banana	nucleus	52.17	54.55
GSMUA_Achr5P07590_001	Banana	nucleus	55.07	52.41
GSMUA_Achr7P21780_001	Banana	nucleus	55.8	51.68
GSMUA_Achr4P10310_001	Banana	nucleus	53.99	50.85
VIT_06s0004g00020.t01	Wine grape	nucleus	53.99	50.17
Os01t0816100-01	Rice	nucleus	55.43	48.11
GSMUA_Achr6P32330_001	Banana	cytosol	46.01	47.04
GSMUA_Achr10P...	Banana	cytosol	51.09	46.38
Os01t0884300-01	Rice	nucleus	45.29	41.25
Os02t0745250-00	Rice	nucleus	26.45	39.04
Os11t0184900-02	Rice	nucleus	44.57	37.39
Os01t0104200-00	Rice	nucleus	40.94	33.33
Os05t0415400-01	Rice	extracellular, nucleus, plastid	33.33	29.68
Os12t0123700-01	Rice	nucleus	41.3	29.01
Os03t0327800-01	Rice	nucleus	40.22	28.32
Os07t0566500-01	Rice	nucleus	43.12	28.0
Os06t0726300-01	Rice	nucleus	28.26	26.71
Os03t0133000-01	Rice	nucleus	29.71	25.95
Os11t0127600-01	Rice	nucleus	31.88	24.51
Os03t0777000-01	Rice	nucleus	30.8	23.48
Os08t0436700-01	Rice	nucleus	27.9	20.0
Os01t0888300-01	Rice	nucleus	30.43	18.58
Os05t0418800-00	Rice	plastid	31.88	18.11
Os02t0745300-00	Rice	plastid	0.72	1.21

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:4342753	EMBL:AB028182	EMBL:AK073667	ProteinID:BAC10231.1
ProteinID:BAD31538.1	ProteinID:BAF21127.1	ProteinID:BAT00678.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlantsGene:Os07g0225300	EnsemblPlants:Os07t0225300-01
PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31719	PANTHER:PTHR31719:SF80	UniProt:Q7EZT1	SUPFAM:SSF101941
UniParc:UPI00000AC315	RefSeq:XP_015645028.1	SEG:seg	:	:	:

Description

NAC DOMAIN-CONTAINING PROTEIN 3OsNAC3 protein. (Os07t0225300-01)

Coordinates

chr7:+:6968003..6969254

Molecular Weight (calculated)

30862.5 Da

IEP (calculated)

6.411

GRAVY (calculated)

-0.591

Length

276 amino acids

Sequence
(BLAST)

001: MAAAKRRVRD AEADLNLPPG FRFHPTDEEL VAHYLCPRAA GRAAPVPIIA ELDLYRHDPW DLPHRALFGR REWYFFTPRD RKYPNGSRPN RAAASGYWKA
101: TGADKPVLHN GRTAGIKKAL VFYHGKPPRG VKTEWIMHEY RLAKKGGAAA AAGAGALRLD DWVLCRLYNK KNEWEKMQSR KEEEEAMAAA QSWGETRTPE
201: SEVVDSDAFP EMDYSLPAAS FDDALLPKEE ARDDDWLMGM SLDDLQGLGS LLQADDLSML APPPAAKTEP LGAPFF

Best Arabidopsis Sequence Match ( AT5G63790.2 )
(BLAST)

001: MNLPFVYKSS MDFALFSSIS IFEINHKDPP IRRFIKTQNR ILSTRKQQGT FPKMKAELNL PAGFRFHPTD EELVKFYLCR RCASEPINVP VIAEIDLYKF
101: NPWELPEMAL YGEKEWYFFS HRDRKYPNGS RPNRAAGTGY WKATGADKPI GKPKTLGIKK ALVFYAGKAP KGIKTNWIMH EYRLANVDRS ASTNKKNNLR
201: LDDWVLCRIY NKKGTMEKYL PAAAEKPTEK MSTSDSRCSS HVISPDVTCS DNWEVESEPK WINLEDALEA FNDDTSMFSS IGLLQNDAFV PQFQYQSSDF
301: VDSFQDPFEQ KPFLNWNFAP QG

Arabidopsis Description

ANAC102NAC domain containing protein 102 [Source:TAIR;Acc:AT5G63790]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.