Factsheet for Os05t0415400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0126900-01	Rice	nucleus	27.42	49.71
Os02t0745250-00	Rice	nucleus	21.29	35.29
Os01t0104200-00	Rice	nucleus	36.45	33.33
Os07t0225300-01	Rice	nucleus	29.68	33.33
Os01t0884300-01	Rice	nucleus	30.65	31.35
VIT_06s0004g02340.t01	Wine grape	nucleus	17.74	30.56
Os01t0816100-01	Rice	nucleus	30.32	29.56
Os03t0815100-01	Rice	nucleus	28.71	28.16
Os11t0184900-02	Rice	nucleus	29.35	27.66
Solyc10g083450.1.1	Tomato	cytosol	24.52	26.3
Os03t0327800-01	Rice	nucleus	33.23	26.28
PGSC0003DMT400093822	Potato	nucleus	25.16	26.26
Solyc11g065540.1.1	Tomato	nucleus	26.13	26.21
Os12t0123700-01	Rice	nucleus	32.26	25.45
Os06t0726300-01	Rice	nucleus	22.58	23.97
Os03t0133000-01	Rice	nucleus	24.19	23.73
Os07t0566500-01	Rice	nucleus	32.26	23.53
Os08t0436700-01	Rice	nucleus	26.13	21.04
Os03t0777000-01	Rice	nucleus	24.52	20.99
Os11t0127600-01	Rice	nucleus	23.87	20.61
Solyc07g006840.1.1	Tomato	nucleus	23.87	15.32
PGSC0003DMT400048237	Potato	nucleus	23.23	14.72
Os01t0888300-01	Rice	nucleus	21.29	14.6
Os05t0418800-00	Rice	plastid	22.58	14.4
CDX82429	Canola	plastid	0.97	2.8
Os02t0745300-00	Rice	plastid	0.65	1.21

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:4338800	ProteinID:AAT77373.1	ProteinID:AAV32133.1	ProteinID:BAF17469.1
ProteinID:BAS94034.1	ProteinID:EEE63736.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlantsGene:Os05g0415400	EnsemblPlants:Os05t0415400-01	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR45430	UniProt:Q6AT85	SUPFAM:SSF101941	UniParc:UPI00003FE6EE	RefSeq:XP_015638459.1
SEG:seg	:	:	:	:	:

Description

NAC DOMAIN-CONTAINING PROTEIN 24Similar to OsNAC6 protein. (Os05t0415400-01)

Coordinates

chr5:-:20308486..20310242

Molecular Weight (calculated)

33891.0 Da

IEP (calculated)

4.604

GRAVY (calculated)

-0.367

Length

310 amino acids

Sequence
(BLAST)

001: MAMQLSLPVL PTGFRFHPTD EELVINYLQR RATGLSCPIP IIADVEIYNF NPWELPSMAL FGEHEWYFFT LRDHRYPNSV RPSRSAASGF WKATGTDKPV
101: QVANMQSTPV AMKKALVFYV GRPPMETKTT WIMHEYRLTN TGGSTASHPS LSSSTAHPSV KLDEWVLCKI FNKSPEPDNT APPSNVVSRL QCSPPLPPPA
201: APPGNYPPLP VGATNDGGVF AGAGDMLFTI QEHQEGTPSM LPPIPNLEPP AATIGNSSLN GTAAAAAAAD GHGRLEEEDT SAYTFTDQEM EQMLMDLMDQ
301: DFFGNDQPQE

Best Arabidopsis Sequence Match ( AT1G01720.1 )
(BLAST)

001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY

Arabidopsis Description

NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.