Factsheet for Os08t0436700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

nucleus: 19225807

gfp PMID: 19225807 doi

N Yokotani, T Ichikawa, Y Kondou, M Matsui, H Hirochika, M Iwabuchi, K Oda

Research Institute for Biological Sciences, Okayama, 7549-1 Yoshikawa, Kibichuo-cho, Okayama 716-1241, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0745250-00	Rice	nucleus	35.84	73.8
EES13897	Sorghum	nucleus	73.25	73.44
TraesCS5D01G344100.1	Wheat	nucleus	72.47	73.23
TraesCS5A01G339600.1	Wheat	nucleus	72.21	72.97
TraesCS5B01G338400.1	Wheat	nucleus	71.69	72.44
TraesCS5B01G338700.1	Wheat	nucleus	71.43	72.18
TraesCS2B01G076000.1	Wheat	nucleus	62.86	72.02
TraesCS5D01G472600.1	Wheat	nucleus	71.17	71.92
Zm00001d050410_P001	Maize	nucleus	70.65	71.39
TraesCS2A01G063200.1	Wheat	nucleus	70.39	70.03
TraesCS2B01G075900.1	Wheat	nucleus	70.39	70.03
HORVU2Hr1G011370.1	Barley	nucleus	69.87	69.51
TraesCS2A01G063300.1	Wheat	nucleus	68.31	69.03
TraesCS2D01G061500.1	Wheat	nucleus	69.35	68.99
Zm00001d032182_P001	Maize	nucleus	69.87	68.62
TraesCS2D01G061600.1	Wheat	nucleus	64.16	68.61
TraesCS2B01G076100.1	Wheat	nucleus	62.6	68.47
HORVU2Hr1G011390.1	Barley	nucleus	62.86	66.85
HORVU2Hr1G011360.1	Barley	nucleus	62.86	66.85
TraesCS2A01G063400.1	Wheat	nucleus	47.27	64.77
Os11t0126900-01	Rice	nucleus	19.22	43.27
CDY65270	Canola	nucleus	41.56	40.51
Bra016294.1-P	Field mustard	nucleus	42.86	40.05
GSMUA_Achr10P...	Banana	cytosol	43.64	39.81
CDY46433	Canola	nucleus	42.6	39.81
AT1G26870.1	Thale cress	nucleus	43.12	39.71
Bra024677.1-P	Field mustard	nucleus	42.86	39.66
CDY01755	Canola	nucleus	37.66	36.52
Bra004403.1-P	Field mustard	nucleus	36.36	34.57
CDX95910	Canola	nucleus	36.62	34.47
Os03t0133000-01	Rice	nucleus	26.23	31.96
Os03t0777000-01	Rice	nucleus	29.61	31.49
Os06t0726300-01	Rice	nucleus	23.12	30.48
Os01t0884300-01	Rice	nucleus	22.86	29.04
Os07t0225300-01	Rice	nucleus	20.0	27.9
Os01t0816100-01	Rice	nucleus	22.6	27.36
Os03t0815100-01	Rice	nucleus	21.56	26.27
Os01t0104200-00	Rice	nucleus	23.12	26.25
Os11t0184900-02	Rice	nucleus	22.34	26.14
Os05t0415400-01	Rice	extracellular, nucleus, plastid	21.04	26.13
Os11t0127600-01	Rice	nucleus	24.16	25.91
Os03t0327800-01	Rice	nucleus	25.19	24.74
Os07t0566500-01	Rice	nucleus	25.45	23.06
Os01t0888300-01	Rice	nucleus	26.49	22.57
Os12t0123700-01	Rice	nucleus	22.6	22.14
Os05t0418800-00	Rice	plastid	25.19	19.96
Os02t0745300-00	Rice	plastid	6.23	14.55

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:4345668	ProteinID:BAD10145.1	ProteinID:BAF23803.1	ProteinID:BAT05599.1
ProteinID:EAZ42858.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlantsGene:Os08g0436700	EnsemblPlants:Os08t0436700-01	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR44574	PANTHER:PTHR44574:SF3	UniProt:Q6Z538	SUPFAM:SSF101941	UniParc:UPI000023B015	RefSeq:XP_015649454.1
SEG:seg	:	:	:	:	:

Description

NAC DOMAIN-CONTAINING PROTEIN 63Similar to NAC transcription factor. (Os08t0436700-01)

Coordinates

chr8:+:21218225..21220249

Molecular Weight (calculated)

43338.9 Da

IEP (calculated)

8.270

GRAVY (calculated)

-0.617

Length

385 amino acids

Sequence
(BLAST)

001: MEERNDVNMD KSDEILLPGF RFHPTDEELV SFYLKRKIQQ KPISIELIRQ LDIYKFDPWD LPKLASTGEK EWYFYCPRDR KYRNSVRPNR VTTAGFWKAT
101: GTDRPIYSTE GTKCIGLKKS LVFYKGRAAR GIKTDWMMHE FRLPTLTDPS LPKKPIDKNI PLNDSWTICR IFKKTSSMAQ RALCQTWGAQ LPGTIDPDIF
201: STLQSVQASQ FALESSSCSL QAAATAAHQI TSKYALQGNN NNQQQQQQHK PSNPLDGSSC KVINFNCSQS AEVQNSQIIL PFEAHTSQKT ATPLLFDTQF
301: GQPDQISRFV VDSSVNANGG GISNKSQDPS ARKPGSGFSM NSDWDGVARI NFPFDLGADS SEDWRSSIPW ESFLSPTTVH AEMPN

Best Arabidopsis Sequence Match ( AT1G26870.1 )
(BLAST)

001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT

Arabidopsis Description

FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.