Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0436700-01 | Rice | nucleus | 14.55 | 6.23 |
| CDX82429 | Canola | plastid | 3.64 | 5.61 |
| Os01t0888300-01 | Rice | nucleus | 12.12 | 4.42 |
| Os05t0418800-00 | Rice | plastid | 10.91 | 3.7 |
| Os03t0133000-01 | Rice | nucleus | 6.67 | 3.48 |
| Os11t0127600-01 | Rice | nucleus | 6.67 | 3.06 |
| Os06t0726300-01 | Rice | nucleus | 4.85 | 2.74 |
| Os02t0745250-00 | Rice | nucleus | 3.03 | 2.67 |
| Os03t0777000-01 | Rice | nucleus | 5.45 | 2.49 |
| Os01t0884300-01 | Rice | nucleus | 4.24 | 2.31 |
| Os03t0327800-01 | Rice | nucleus | 5.45 | 2.3 |
| Solyc07g006840.1.1 | Tomato | nucleus | 6.67 | 2.28 |
| PGSC0003DMT400048237 | Potato | nucleus | 6.67 | 2.25 |
| Os07t0566500-01 | Rice | nucleus | 4.85 | 1.88 |
| Os11t0184900-02 | Rice | nucleus | 3.64 | 1.82 |
| Os01t0816100-01 | Rice | nucleus | 3.03 | 1.57 |
| Os12t0123700-01 | Rice | nucleus | 3.64 | 1.53 |
| Os01t0104200-00 | Rice | nucleus | 3.03 | 1.47 |
| Os03t0815100-01 | Rice | nucleus | 2.42 | 1.27 |
| PGSC0003DMT400093822 | Potato | nucleus | 1.82 | 1.01 |
| Solyc11g065540.1.1 | Tomato | nucleus | 1.82 | 0.97 |
| Os07t0225300-01 | Rice | nucleus | 1.21 | 0.72 |
| Solyc10g083450.1.1 | Tomato | cytosol | 1.21 | 0.69 |
| Os05t0415400-01 | Rice | extracellular, nucleus, plastid | 1.21 | 0.65 |
| Os11t0126900-01 | Rice | nucleus | 0.0 | 0.0 |
| VIT_06s0004g02340.t01 | Wine grape | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os02t0745300-00 | EnsemblPlantsGene:Os02g0745300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | PANTHER:PTHR44574 |
| PANTHER:PTHR44574:SF1 | ProteinID:BAS80901.1 | UniParc:UPI0003939F48 | UniProt:A0A0P0VPI4 | MapMan:35.2 | : |
Description
Conserved hypothetical protein. (Os02t0745300-00)
Coordinates
chr2:+:31282670..31283167
Molecular Weight (calculated)
17834.0 Da
IEP (calculated)
4.239
GRAVY (calculated)
-0.175
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDAISSTIQ FTGSSYLPST VPSCHNPLSM IDSNSRPDAS VPLPSPVAEH QTMGILSAIP LDITAGIDIA SMVFNASSFT LPNMDRMTAN IEFGQPQKCN
101: SSSSMTNRCV VDMPDVANNI NSGPRSINFN LQGTLSDDWR MTLPWESLPC TTEVSTNFQS TKCYT
101: SSSSMTNRCV VDMPDVANNI NSGPRSINFN LQGTLSDDWR MTLPWESLPC TTEVSTNFQS TKCYT
001: MTFQTEVPDD GSRQASSSPY SGKGKIVPEC GLVGDMYDPF VDSFEPASVK LDCVQEHEPD NDLCIVPKAS ISSNRPLSME ENNQAVDKEP LCESEMTARV
101: SVSSNKPADV EENTAGIEIG EVVSGEDDEF GKNVDDGREC NSHETLTPNS DNENPKVENN VHEGDNTRKK SREKSKERDS SRSMKLFKVV LTKFVKDLLK
201: PSWRQGNMSK EAFKTIVKRV VDKVSNSMEG RRIPKSRAKI DKYIDSSQQK LTKLVMGYVD KYVKA
101: SVSSNKPADV EENTAGIEIG EVVSGEDDEF GKNVDDGREC NSHETLTPNS DNENPKVENN VHEGDNTRKK SREKSKERDS SRSMKLFKVV LTKFVKDLLK
201: PSWRQGNMSK EAFKTIVKRV VDKVSNSMEG RRIPKSRAKI DKYIDSSQQK LTKLVMGYVD KYVKA
Arabidopsis Description
At3g26850 [Source:UniProtKB/TrEMBL;Acc:Q9LW25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.