Factsheet for Os11t0127600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

nucleus: 19135985

gfp PMID: 19135985 doi

X Zheng, B Chen, G Lu, B Han

National Center for Gene Research & Shanghai Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 500 Caobao Road, Shanghai 200233, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0126900-01	Rice	nucleus	20.89	43.86
Os02t0745250-00	Rice	nucleus	21.45	41.18
Os01t0884300-01	Rice	nucleus	30.64	36.3
Os07t0225300-01	Rice	nucleus	24.51	31.88
Os11t0184900-02	Rice	nucleus	28.69	31.31
Os01t0816100-01	Rice	nucleus	25.91	29.25
Os03t0815100-01	Rice	nucleus	25.63	29.11
Os01t0104200-00	Rice	nucleus	26.46	28.02
Os06t0726300-01	Rice	nucleus	21.73	26.71
Os03t0327800-01	Rice	nucleus	28.41	26.02
Os03t0133000-01	Rice	nucleus	22.01	25.0
Os08t0436700-01	Rice	nucleus	25.91	24.16
Os03t0777000-01	Rice	nucleus	24.23	24.03
Os05t0415400-01	Rice	extracellular, nucleus, plastid	20.61	23.87
Os07t0566500-01	Rice	nucleus	28.13	23.76
Os12t0123700-01	Rice	nucleus	25.35	23.16
Os01t0888300-01	Rice	nucleus	24.51	19.47
Os05t0418800-00	Rice	plastid	23.12	17.08
Os02t0745300-00	Rice	plastid	3.06	6.67

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:4349650	UniProt:A0A2H4CLX6	ProteinID:ABA91280.1	EMBL:AK067922
ProteinID:BAF27474.1	ProteinID:BAT12487.1	ProteinID:EAZ17268.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009414	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0045893	InterPro:IPR003441
InterPro:IPR036093	EMBL:KP033191	EMBL:KT957809	InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlantsGene:Os11g0127600
EnsemblPlants:Os11t0127600-01	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF23	UniProt:Q2RB33
SUPFAM:SSF101941	UniParc:UPI0000682560	RefSeq:XP_015615868.1	SEG:seg	:	:

Description

NAC DOMAIN-CONTAINING PROTEIN 45No apical meristem (NAM) protein domain containing protein. (Os11t0127600-01)

Coordinates

chr11:+:1269314..1271179

Molecular Weight (calculated)

39690.6 Da

IEP (calculated)

7.250

GRAVY (calculated)

-0.556

Length

359 amino acids

Sequence
(BLAST)

001: MVETSTSLVK LEQDGSLFLP PGFRFHPTDA EVILSYLLQK FLNPSFTSLP IGEVDLNKCE PWDLPSKAKM GEKEWYFFSH KDMKYPTGMR TNRATKEGYW
101: KATGKDREIF NLQPTSYGGS SNNKNNKQLV GMKKTLVFYM GRAPKGTKTN WVMHEFRLHA NLHNDNPNLR LNLKDEWVVC KVFHKKGDDR EAINKQQAQA
201: AAVDQYSAGT PNNGSSVEAG DDDDDLFQLD SIIDPSIYFS NSSAANILSA PPNMSNSVVA ANYGASTTTT GTASAGSFQQ QPNYCSLINK SISSSNVSSW
301: NNMPPPPPVA EGGVHGIGSS YSLQHQAAMV KALRDVIRLP NPLGMPQYKL DDAYLWDSS

Best Arabidopsis Sequence Match ( AT5G07680.1 )
(BLAST)

001: METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG EVDLNKAEPW ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY

Arabidopsis Description

NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.