Factsheet for Solyc07g006840.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400048237	Potato	nucleus	78.05	77.1
VIT_06s0004g02340.t01	Wine grape	nucleus	13.66	36.67
Solyc11g017470.1.1	Tomato	nucleus	20.08	33.33
Solyc05g007770.2.1	Tomato	nucleus	19.25	32.98
Solyc06g060230.2.1	Tomato	nucleus	19.88	32.43
Solyc04g005610.2.1	Tomato	nucleus	18.43	32.36
Solyc07g063420.2.1	Tomato	nucleus	21.74	31.91
Solyc02g061780.2.1	Tomato	nucleus	15.53	30.74
Solyc10g083450.1.1	Tomato	cytosol	18.01	30.1
Solyc10g006880.2.1	Tomato	nucleus	21.95	29.86
Solyc04g009440.2.1	Tomato	nucleus	18.43	29.57
Solyc07g063410.2.1	Tomato	nucleus	21.53	29.21
Solyc11g065540.1.1	Tomato	nucleus	18.43	28.8
Solyc12g013620.1.1	Tomato	nucleus	20.5	28.37
Solyc02g069960.2.1	Tomato	nucleus	18.01	28.06
Solyc05g021090.2.1	Tomato	nucleus	15.94	27.6
Solyc10g055760.1.1	Tomato	cytosol	15.53	26.5
Solyc07g045030.2.1	Tomato	nucleus	17.81	25.98
Os05t0415400-01	Rice	extracellular, nucleus, plastid	15.32	23.87
Solyc05g007550.1.1	Tomato	nucleus	18.22	22.56
Solyc02g087920.2.1	Tomato	nucleus	17.39	21.93
Solyc01g102740.2.1	Tomato	nucleus	18.22	21.31
Os02t0745300-00	Rice	plastid	2.28	6.67

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	InterPro:EF_Hand_1_Ca_BS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	UniProt:K4CBF5	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
ScanProsite:PS00018	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF101	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc07g006840.1
EnsemblPlants:Solyc07g006840.1.1	UniParc:UPI000276C9B9	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:+:1707455..1710527

Molecular Weight (calculated)

55516.3 Da

IEP (calculated)

4.777

GRAVY (calculated)

-0.975

Length

483 amino acids

Sequence
(BLAST)

001: MENHNTSLTN NESKDNLISA NHINELPISA VFSNKDSNGD QIMSPEDVEA LMNKFPPGFR FHPTDYELIK HYLERKLANL PLHPNKIYEL NIYKYEPDTI
101: AAQLKPTTTE NIWYVFTPRD RKYPNGERPD RCTWNGYWKA TGIDKIIVDD DNISKIGSRR ALVYYIGKPP NGKKTDWIMH EYMIPKITIP NSSTPRNPKL
201: DEWVLCKFYN RNDVITSGST RRKRKRGDHD PIIDEVHQDS VRNSFTNFNN NDNHAVMLSE GTSLGNDPTS YFNYNYNHAM MFFQGTDQDS MRKDHTNYDN
301: NYNHAMTLHP QVHMEVPTLP QCPNMPFLSN YQNYVSDHFN DYSIVDPPLP LRIEPTPTNN SIEHDYTMNN VGVGGDYGEY SEVHDQYYVS DQYIVDNYES
401: QYDTNNFVNG ETTTSNNFVN GETTTSNNFV NGETTTTSNN FVNGETTNSN NFANGETTNS DNYETNTSNN FVNGETSTSK EDS

Best Arabidopsis Sequence Match ( AT1G61110.1 )
(BLAST)

001: MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS

Arabidopsis Description

NAC025NAC transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY42]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.