Factsheet for Solyc10g055760.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028190	Potato	nucleus	91.87	89.97
VIT_03s0038g03410.t01	Wine grape	nucleus	61.13	62.01
CDY02222	Canola	nucleus	56.54	56.94
AT2G17040.1	Thale cress	nucleus	55.48	56.88
Bra013034.1-P	Field mustard	nucleus	56.18	56.58
CDY39487	Canola	nucleus	56.18	56.58
Bra037283.1-P	Field mustard	nucleus	55.48	56.27
CDY26794	Canola	nucleus	55.48	56.27
CDY47485	Canola	nucleus	55.12	55.91
CDY47486	Canola	nucleus	55.12	55.91
KRH24118	Soybean	cytosol	57.95	55.22
KRH29090	Soybean	nucleus	57.6	53.97
GSMUA_Achr11P...	Banana	nucleus	48.76	52.67
GSMUA_Achr1P02710_001	Banana	nucleus	50.18	52.21
GSMUA_AchrUn_...	Banana	nucleus	48.06	52.11
CDX71329	Canola	endoplasmic reticulum, extracellular	53.36	49.19
Solyc02g061780.2.1	Tomato	nucleus	41.7	48.36
GSMUA_Achr5P19060_001	Banana	nucleus	41.7	48.36
GSMUA_Achr7P04030_001	Banana	nucleus	48.06	47.72
Bra002018.1-P	Field mustard	cytosol	53.0	47.02
CDY31385	Canola	cytosol	52.65	46.71
Os03t0133000-01	Rice	nucleus	51.94	46.52
Zm00001d014843_P001	Maize	nucleus	43.82	46.27
GSMUA_Achr3P14720_001	Banana	nucleus	46.29	45.33
Os06t0726300-01	Rice	nucleus	46.29	44.86
TraesCS7A01G549000.1	Wheat	cytosol, nucleus, plastid	46.64	44.44
TraesCS7D01G535300.1	Wheat	cytosol, nucleus, plastid	46.29	43.96
EER92917	Sorghum	nucleus	50.18	43.43
GSMUA_Achr3P00560_001	Banana	nucleus	42.76	43.37
Zm00001d048347_P001	Maize	nucleus	48.41	43.22
Zm00001d027530_P001	Maize	nucleus	49.47	43.08
TraesCS7B01G472600.1	Wheat	cytosol, nucleus, plastid	45.58	43.0
TraesCS7B01G472200.1	Wheat	cytosol, nucleus, plastid	44.88	42.76
TraesCS5A01G500500.1	Wheat	nucleus	50.18	42.01
TraesCS5A01G500400.1	Wheat	nucleus	50.88	41.38
TraesCS4B01G328800.1	Wheat	nucleus	50.18	40.92
TraesCS4D01G325700.1	Wheat	nucleus	50.18	40.92
Zm00001d036364_P001	Maize	nucleus	46.29	40.18
TraesCS4B01G328600.1	Wheat	nucleus	49.82	40.17
TraesCS4D01G325800.1	Wheat	nucleus	50.18	40.11
TraesCS4B01G329100.1	Wheat	nucleus	49.47	39.77
HORVU4Hr1G081450.1	Barley	nucleus	49.82	39.61
TraesCS4B01G328900.1	Wheat	nucleus	49.12	39.49
TraesCS4B01G328700.1	Wheat	nucleus	48.76	39.09
TraesCS5A01G500700.1	Wheat	nucleus	49.12	39.04
HORVU4Hr1G081430.1	Barley	cytosol, nucleus	50.18	38.38
TraesCS5A01G500600.1	Wheat	nucleus	49.12	37.67
HORVU4Hr1G081440.3	Barley	nucleus	49.47	36.84
GSMUA_Achr1P18110_001	Banana	cytosol, nucleus, plastid	27.56	35.94
KXG20943	Sorghum	nucleus, plastid	48.41	35.49
Solyc04g005610.2.1	Tomato	nucleus	28.62	29.45
Solyc05g021090.2.1	Tomato	nucleus	27.56	27.96
Solyc06g060230.2.1	Tomato	nucleus	28.98	27.7
Solyc11g017470.1.1	Tomato	nucleus	28.27	27.49
Solyc05g007770.2.1	Tomato	nucleus	27.21	27.3
Solyc02g069960.2.1	Tomato	nucleus	28.62	26.13
Solyc07g045030.2.1	Tomato	nucleus	30.39	25.98
Solyc04g009440.2.1	Tomato	nucleus	27.56	25.91
Solyc02g087920.2.1	Tomato	nucleus	32.51	24.02
Solyc12g013620.1.1	Tomato	nucleus	29.33	23.78
Solyc05g007550.1.1	Tomato	nucleus	32.51	23.59
Solyc01g102740.2.1	Tomato	nucleus	34.28	23.49
Solyc07g063420.2.1	Tomato	nucleus	27.21	23.4
Solyc07g063410.2.1	Tomato	nucleus	29.33	23.31
Solyc11g065540.1.1	Tomato	nucleus	25.44	23.3
Solyc10g083450.1.1	Tomato	cytosol	23.67	23.18
Solyc10g006880.2.1	Tomato	nucleus	27.92	22.25
Solyc07g006840.1.1	Tomato	nucleus	26.5	15.53

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009653	GO:GO:0009719	GO:GO:0009791	GO:GO:0009965	GO:GO:0009987	GO:GO:0010200
GO:GO:0016043	GO:GO:0045792	GO:GO:0048281	InterPro:IPR003441	InterPro:IPR036093	UniProt:K4D1G6
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF2
SUPFAM:SSF101941	EnsemblPlantsGene:Solyc10g055760.1	EnsemblPlants:Solyc10g055760.1.1	UniParc:UPI00027695F6	:	:

Description

No Description!

Coordinates

chr10:+:57396733..57397744

Molecular Weight (calculated)

32559.7 Da

IEP (calculated)

7.237

GRAVY (calculated)

-0.583

Length

283 amino acids

Sequence
(BLAST)

001: MEDLPGFRFH PTEEELLEFY LKNKILGRTS RCDVIGLLNI YRHDPWDLPG LSTIGEREWY FFVARDRKHG NGGRPNRTTE KGFWKATGSD KKIIGLSNPK
101: NIIGLKKTLV FYTGRAPRGS KTDWVMNEFR LPDTVSWPQD IVLCKIYRKA TSLKVLEQRA AIEEEMKHVH SSPCSTTLQT MDAMSFGNEH HELTDKSPDL
201: FTSISKDEVD DDRLSVAENK VSAETKEKSN CFRPKLLNGQ DSLAELQVPK FSMDFSQDPV WMQLRSPWLD NFILTPSAFV HNF

Best Arabidopsis Sequence Match ( AT2G17040.1 )
(BLAST)

001: MGKDIELPGF RFHPTEEELL DFYLKNMVYG KRSSVEVIGF LNIYRHDPWD LPGLSRIGER EWYFFVPRER KHGNGGRPSR TTEKGYWKAT GSDRKIISLS
101: EPKRVIGLKK TLVFYRGRAP GGSKTDWVMN EFRMPDNCSL PKDVVLCKIY RKATSLKVLE QRAEMEAKMN QTCPNSPLSS SETISFVGKE ENMMTSFRAP
201: QVIAMEEANK IQMHQENAKT EEKQREAETK EPSSSLKLPF GSLPELQLPK PGVEWDQLLS ISPWLQNLTP IVNIYW

Arabidopsis Description

anac036NAC domain containing protein 36 [Source:UniProtKB/TrEMBL;Acc:F4IME8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.