Factsheet for Solyc02g087920.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003343	Potato	nucleus	92.95	89.9
VIT_14s0108g00860.t01	Wine grape	nucleus	56.4	61.19
KRG93526	Soybean	nucleus	53.0	55.31
KRH18479	Soybean	nucleus	52.48	52.89
Solyc05g007550.1.1	Tomato	nucleus	51.44	50.51
TraesCS5D01G239600.1	Wheat	nucleus	48.56	47.21
CDY11662	Canola	nucleus	41.25	47.16
TraesCS5A01G228000.1	Wheat	nucleus	48.04	46.7
TraesCS5B01G226800.1	Wheat	nucleus	47.78	46.45
Bra028441.1-P	Field mustard	nucleus	40.47	46.27
CDX67438	Canola	nucleus	40.21	45.97
AT5G39820.1	Thale cress	nucleus	39.95	45.4
Solyc02g069960.2.1	Tomato	nucleus	31.59	39.03
Solyc05g021090.2.1	Tomato	nucleus	27.68	37.99
Solyc02g061780.2.1	Tomato	nucleus	23.24	36.48
Solyc07g045030.2.1	Tomato	nucleus	30.81	35.65
Solyc04g005610.2.1	Tomato	nucleus	24.28	33.82
Solyc10g055760.1.1	Tomato	cytosol	24.02	32.51
Solyc05g007770.2.1	Tomato	nucleus	23.24	31.56
Solyc06g060230.2.1	Tomato	nucleus	24.28	31.42
Solyc11g017470.1.1	Tomato	nucleus	23.76	31.27
Solyc04g009440.2.1	Tomato	nucleus	23.24	29.57
Solyc07g063420.2.1	Tomato	nucleus	25.07	29.18
Solyc12g013620.1.1	Tomato	nucleus	24.02	26.36
Solyc11g065540.1.1	Tomato	nucleus	21.15	26.21
Solyc10g083450.1.1	Tomato	cytosol	19.58	25.95
Solyc07g063410.2.1	Tomato	nucleus	23.5	25.28
Solyc10g006880.2.1	Tomato	nucleus	23.24	25.07
Solyc01g102740.2.1	Tomato	nucleus	26.63	24.7
Solyc07g006840.1.1	Tomato	nucleus	21.93	17.39

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:K4BBU8	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR44574	PANTHER:PTHR44574:SF1	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc02g087920.2	EnsemblPlants:Solyc02g087920.2.1	UniParc:UPI00027682ED

Description

No Description!

Coordinates

chr2:+:50172301..50173754

Molecular Weight (calculated)

43371.6 Da

IEP (calculated)

6.908

GRAVY (calculated)

-0.663

Length

383 amino acids

Sequence
(BLAST)

001: MDDKSDVEKL DEVMLPGFRF HPTDEELVGF YLKRKIQQRS LPIELIKQVD IYKYDPWDLP KLASTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT
101: DRPIYSSDST KCIGLKKSLV FYRGRAARGI KTDWMMHEFR LPTTNNESGP PKKFLEKNFP PNDSWAICRI FKKTNSMANR ALSYAWGNPL SEVASPELFN
201: QSANAHFVSE NVSSITETGT ALHLSNNNDL LQGASNVPSY KSLNAMASRP SYLSSPSTDI SYNFMFSSPE VSGQNNRCLL DANSMFFNTS PALITDISKT
301: SESIDFDGSN QQLKMQTSIS MENDEAGLKS NRTSINDNTE WENMRSVGFP FSLAEEWKPS LSWDSPPCPS EISTSFSTNK CYN

Best Arabidopsis Sequence Match ( AT1G26870.1 )
(BLAST)

001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT

Arabidopsis Description

FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.