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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028441.1-P Field mustard nucleus 96.42 96.42
CDX67438 Canola nucleus 96.42 96.42
AT5G39820.1 Thale cress nucleus 82.69 82.2
CDY26031 Canola cytosol 23.88 52.98
CDY26032 Canola cytosol 23.88 49.69
VIT_14s0108g00860.t01 Wine grape nucleus 50.75 48.16
CDX82430 Canola nucleus 26.87 45.23
CDY22671 Canola nucleus 26.27 44.22
KRG93526 Soybean nucleus 46.27 42.23
Solyc02g087920.2.1 Tomato nucleus 47.16 41.25
KRH18479 Soybean nucleus 45.67 40.26
PGSC0003DMT400003343 Potato nucleus 47.46 40.15
TraesCS5D01G239600.1 Wheat nucleus 44.48 37.82
TraesCS5A01G228000.1 Wheat nucleus 44.48 37.82
TraesCS5B01G226800.1 Wheat nucleus 44.18 37.56
CDY30373 Canola nucleus 31.04 37.55
CDY43391 Canola nucleus 32.84 37.29
CDY65270 Canola nucleus 43.58 36.96
CDY55499 Canola nucleus 30.75 36.92
CDY53654 Canola nucleus 30.75 36.92
CDY14865 Canola nucleus 30.45 36.82
CDY01755 Canola nucleus 42.99 36.27
CDY64562 Canola nucleus 31.64 36.05
CDY24238 Canola nucleus 32.54 35.5
CDX82569 Canola nucleus 31.64 35.1
CDY46433 Canola nucleus 42.99 34.95
CDX82432 Canola nucleus 25.37 34.41
CDX95910 Canola nucleus 41.79 34.23
CDX95931 Canola cytosol 27.46 34.07
CDY40930 Canola cytosol 27.46 34.07
CDY60122 Canola nucleus 32.84 33.64
CDY41537 Canola nucleus 24.48 32.8
CDY42902 Canola nucleus 26.87 32.14
CDX84443 Canola nucleus 24.18 32.14
CDY07348 Canola nucleus 25.67 31.73
CDY51500 Canola nucleus 25.67 31.62
CDY40894 Canola nucleus 24.48 31.54
CDY40732 Canola cytosol, nucleus, plastid 24.18 31.4
CDY29836 Canola nucleus 28.06 31.33
CDX92828 Canola nucleus 28.06 31.33
CDX89253 Canola nucleus 28.06 31.33
CDY44788 Canola cytosol, nucleus, plastid 24.48 31.3
CDX78352 Canola cytosol, nucleus, plastid 24.48 31.3
CDY69545 Canola nucleus 28.96 31.09
CDY29303 Canola nucleus 27.76 31.0
CDY31350 Canola nucleus 24.18 30.57
CDY53806 Canola nucleus 28.96 30.5
CDY38346 Canola cytosol, nucleus, plastid 23.58 30.38
CDY21567 Canola nucleus 24.78 29.86
CDX69919 Canola nucleus 24.78 29.86
CDX90054 Canola nucleus 25.37 29.82
CDY47485 Canola nucleus 24.78 29.75
CDY47486 Canola nucleus 24.78 29.75
CDY26794 Canola nucleus 24.78 29.75
CDY21844 Canola nucleus 28.06 29.65
CDY15158 Canola nucleus 25.07 29.37
CDY20109 Canola nucleus 27.76 29.34
CDY12886 Canola nucleus 27.76 28.97
CDX75833 Canola nucleus 25.67 28.96
CDY40970 Canola nucleus 27.76 28.88
CDY39487 Canola nucleus 24.18 28.83
CDY02222 Canola nucleus 24.18 28.83
CDX97674 Canola nucleus 27.46 28.66
CDX81120 Canola nucleus 20.6 28.63
CDY50880 Canola nucleus 27.76 28.62
CDY23551 Canola nucleus 31.94 28.53
CDY56427 Canola nucleus 27.76 28.44
CDX98560 Canola nucleus 27.16 28.44
CDX97675 Canola nucleus 28.06 27.41
CDX71329 Canola endoplasmic reticulum, extracellular 25.07 27.36
CDY39846 Canola mitochondrion 23.88 27.21
CDY20131 Canola nucleus 27.76 26.57
CDY31385 Canola cytosol 25.07 26.33
CDX98562 Canola nucleus 27.76 25.91
CDY29983 Canola nucleus 26.87 25.35
CDY09368 Canola nucleus 30.15 24.88
CDY04129 Canola nucleus 30.15 24.75
CDY17437 Canola nucleus 29.85 24.63
CDY15835 Canola nucleus 29.85 24.57
CDY03050 Canola nucleus 29.25 23.67
CDY17595 Canola nucleus 29.25 23.5
CDX84050 Canola nucleus 12.84 22.28
CDY42810 Canola nucleus 31.34 20.59
CDX83510 Canola nucleus 30.75 20.2
CDY54324 Canola extracellular 10.45 12.64
CDY16201 Canola plastid 9.55 12.17
CDX82429 Canola plastid 0.9 2.8
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150GO:A0A078FF98UniProt:A0A078FF98EnsemblPlants:CDY11662ProteinID:CDY11662
ProteinID:CDY11662.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00049808001InterPro:IPR003441
InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sfPFAM:PF02365PFscan:PS51005PANTHER:PTHR44574
PANTHER:PTHR44574:SF4SUPFAM:SSF101941UniParc:UPI0004EC30B0SEG:seg::
Description
BnaC06g12700DBnaC06g12700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FF98]
Coordinates
chrLK032013:-:26379..27590
Molecular Weight (calculated)
38180.5 Da
IEP (calculated)
8.066
GRAVY (calculated)
-0.659
Length
335 amino acids
Sequence
(BLAST)
001: MDNEESNNVE RFDDVVLPGF RFHPTDEELV SFYLKRKVLH RSLPFELIKK VDIYKYDPWD LPKLAAMGEK EWYFYCPRDR KYRNSTRPNR VTGGGFWKAT
101: GTDRPIYSLD STQCIGLKKS LVFYRGRAAK GIKTDWMMHE FRLPSLSDSH RSSSYPSYNN KKQHHNINNK EIPSSDAWAI CRIFKKTNSV SSQRAVPQSW
201: LYPAIPETSQ YNLVSQTTTL FASTDAFSNI PTRQNLISSP VDEPASFTES AAAYFASQML GVPYNLARNN GTGDAMFLRN SETENALFPS NNEDNYFHNL
301: AGGLTHELPN VRSMVETGFE TTASEMSATS YSPNT
Best Arabidopsis Sequence Match ( AT5G39820.1 )
(BLAST)
001: MVLVMDDEES NNVERYDDVV LPGFRFHPTD EELVSFYLKR KVLHKSLPFD LIKKVDIYKY DPWDLPKLAA MGEKEWYFYC PRDRKYRNST RPNRVTGGGF
101: WKATGTDRPI YSLDSTRCIG LKKSLVFYRG RAAKGVKTDW MMHEFRLPSL SDSHHSSYPN YNNKKQHLNN NNNSKELPSN DAWAICRIFK KTNAVSSQRS
201: IPQSWVYPTI PDNNQQSHNN TATLLASSDV LSHISTRQNF IPSPVNEPAS FTESAASYFA SQMLGVTYNT ARNNGTGDAL FLRNNGTGDA LVLSNNENNY
301: FNNLTGGLTH EVPNVRSMVM EETTGSEMSA TSYSTNN
Arabidopsis Description
ANAC094Putative NAC domain-containing protein 94 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIW5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.