Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60122 | Canola | nucleus | 84.27 | 96.64 |
| CDY24238 | Canola | nucleus | 70.13 | 85.67 |
| CDY43391 | Canola | nucleus | 66.13 | 84.07 |
| CDX82569 | Canola | nucleus | 66.67 | 82.78 |
| CDY64562 | Canola | nucleus | 63.47 | 80.95 |
| AT3G12910.1 | Thale cress | nucleus | 62.4 | 77.23 |
| CDY26031 | Canola | cytosol | 19.73 | 49.01 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 33.33 | 47.71 |
| CDY30373 | Canola | nucleus | 35.2 | 47.65 |
| GSMUA_Achr10P... | Banana | cytosol | 33.87 | 47.57 |
| Zm00001d007850_P001 | Maize | nucleus | 31.73 | 47.41 |
| CDY14865 | Canola | nucleus | 34.93 | 47.29 |
| KRH46012 | Soybean | nucleus | 37.87 | 46.71 |
| KRG98971 | Soybean | nucleus | 37.6 | 46.38 |
| CDY53654 | Canola | nucleus | 34.13 | 45.88 |
| CDY55499 | Canola | nucleus | 34.13 | 45.88 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 34.93 | 45.64 |
| CDY26032 | Canola | cytosol | 19.47 | 45.34 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 36.27 | 44.74 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 29.33 | 44.0 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 35.47 | 43.32 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 37.07 | 41.25 |
| CDX82430 | Canola | nucleus | 21.87 | 41.21 |
| CDY22671 | Canola | nucleus | 21.87 | 41.21 |
| Zm00001d031164_P001 | Maize | nucleus | 32.8 | 40.2 |
| Zm00001d013151_P001 | Maize | cytosol | 36.0 | 40.18 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 37.6 | 40.17 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 36.27 | 39.88 |
| EES17466 | Sorghum | nucleus | 32.0 | 39.47 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 36.27 | 39.31 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 36.53 | 39.14 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 30.13 | 39.1 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 35.73 | 39.07 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 35.2 | 38.82 |
| EER95852 | Sorghum | nucleus | 35.47 | 38.78 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 36.27 | 38.64 |
| Os03t0777000-01 | Rice | nucleus | 36.53 | 37.85 |
| Zm00001d018773_P001 | Maize | nucleus | 36.0 | 37.71 |
| EER93360 | Sorghum | nucleus | 37.07 | 37.57 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 35.73 | 36.81 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 37.07 | 36.2 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 35.2 | 35.87 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 35.73 | 35.54 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 35.73 | 35.54 |
| CDX82432 | Canola | nucleus | 21.33 | 32.39 |
| CDY41537 | Canola | nucleus | 21.33 | 32.0 |
| CDX67438 | Canola | nucleus | 28.53 | 31.94 |
| CDY11662 | Canola | nucleus | 28.53 | 31.94 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 21.87 | 31.78 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 21.87 | 31.3 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 21.87 | 31.3 |
| CDX84443 | Canola | nucleus | 20.8 | 30.95 |
| CDY26794 | Canola | nucleus | 22.93 | 30.82 |
| CDY47486 | Canola | nucleus | 22.93 | 30.82 |
| CDY40894 | Canola | nucleus | 21.33 | 30.77 |
| CDX90054 | Canola | nucleus | 23.2 | 30.53 |
| CDY47485 | Canola | nucleus | 22.67 | 30.47 |
| CDY31350 | Canola | nucleus | 21.33 | 30.19 |
| CDY15158 | Canola | nucleus | 22.93 | 30.07 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 20.8 | 30.0 |
| CDX69919 | Canola | nucleus | 22.13 | 29.86 |
| CDY21567 | Canola | nucleus | 22.13 | 29.86 |
| CDY39487 | Canola | nucleus | 22.13 | 29.54 |
| CDY07348 | Canola | nucleus | 21.33 | 29.52 |
| CDY51500 | Canola | nucleus | 21.33 | 29.41 |
| CDX95931 | Canola | cytosol | 21.07 | 29.26 |
| CDY40930 | Canola | cytosol | 21.07 | 29.26 |
| CDY02222 | Canola | nucleus | 21.87 | 29.18 |
| CDY12886 | Canola | nucleus | 24.8 | 28.97 |
| CDY40970 | Canola | nucleus | 24.8 | 28.88 |
| CDX89253 | Canola | nucleus | 22.93 | 28.67 |
| CDX81120 | Canola | nucleus | 18.4 | 28.63 |
| CDX92828 | Canola | nucleus | 22.67 | 28.33 |
| CDY29303 | Canola | nucleus | 22.67 | 28.33 |
| CDY29836 | Canola | nucleus | 22.67 | 28.33 |
| CDY42902 | Canola | nucleus | 20.8 | 27.86 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 22.67 | 27.69 |
| CDY21844 | Canola | nucleus | 23.2 | 27.44 |
| CDX75833 | Canola | nucleus | 21.6 | 27.27 |
| CDY20109 | Canola | nucleus | 22.93 | 27.13 |
| CDY65270 | Canola | nucleus | 28.53 | 27.09 |
| CDY69545 | Canola | nucleus | 22.4 | 26.92 |
| CDX98560 | Canola | nucleus | 22.93 | 26.88 |
| CDY39846 | Canola | mitochondrion | 21.07 | 26.87 |
| CDX97674 | Canola | nucleus | 22.93 | 26.79 |
| CDY53806 | Canola | nucleus | 22.67 | 26.73 |
| CDY31385 | Canola | cytosol | 22.67 | 26.65 |
| CDX83510 | Canola | nucleus | 35.47 | 26.08 |
| CDY56427 | Canola | nucleus | 22.67 | 25.99 |
| CDY42810 | Canola | nucleus | 35.2 | 25.88 |
| CDY46433 | Canola | nucleus | 27.73 | 25.24 |
| CDY20131 | Canola | nucleus | 23.2 | 24.86 |
| CDY01755 | Canola | nucleus | 26.13 | 24.69 |
| CDY50880 | Canola | nucleus | 21.33 | 24.62 |
| CDX97675 | Canola | nucleus | 22.13 | 24.2 |
| CDX84050 | Canola | nucleus | 12.27 | 23.83 |
| CDX95910 | Canola | nucleus | 25.87 | 23.72 |
| CDX98562 | Canola | nucleus | 22.13 | 23.12 |
| CDY29983 | Canola | nucleus | 21.87 | 23.1 |
| CDY09368 | Canola | nucleus | 24.0 | 22.17 |
| CDY17437 | Canola | nucleus | 23.73 | 21.92 |
| CDY15835 | Canola | nucleus | 23.73 | 21.87 |
| CDY04129 | Canola | nucleus | 23.73 | 21.81 |
| CDY03050 | Canola | nucleus | 23.47 | 21.26 |
| CDY17595 | Canola | nucleus | 23.47 | 21.1 |
| CDY16201 | Canola | plastid | 5.07 | 7.22 |
| CDY54324 | Canola | extracellular | 4.53 | 6.14 |
| CDX82429 | Canola | plastid | 1.07 | 3.74 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078GDY5 | UniProt:A0A078GDY5 | EnsemblPlants:CDY23551 | ProteinID:CDY23551 |
| ProteinID:CDY23551.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00023738001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 |
| PANTHER:PTHR44543:SF1 | SUPFAM:SSF101941 | UniParc:UPI0004EC73AB | SEG:seg | : | : |
Description
BnaC05g40430DBnaC05g40430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDY5]
Coordinates
chrLK032145:+:9793..14771
Molecular Weight (calculated)
42715.9 Da
IEP (calculated)
6.359
GRAVY (calculated)
-0.766
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEMMGSWDK RREEQEEEEE QVLKLPGFRF HPTDKELVGF YLSKKVLLKK SSKIDEIISQ IDIYKFDPWD LPRSSDRGGE VASAMFNLGC TDRGGELASD
101: ELNLIEHSCC GTNILRGNPA ITDVAYVTYG LATDQRCVWF EGSTHTEKES YFFCKRGRKY RNSIRPNRVT GSGFWKATGI DKPIYSDGPS KAVIGLKKTL
201: VYYIGSAGKG SKTDWMMHEF RLPTANDTIP GGSTHRSPTP SSLLHAEVWT LCRIFKRNAS SRKYTPDSKE LASWERVKPQ QSNNREAAYI SFGDNESSTN
301: KINVMESKEN NERNVFQLHQ TPHPHQPIPM EYTSSTQVDN TVPHISNDNN MDDVNYENWD ELRSVVEFAF GPSSY
101: ELNLIEHSCC GTNILRGNPA ITDVAYVTYG LATDQRCVWF EGSTHTEKES YFFCKRGRKY RNSIRPNRVT GSGFWKATGI DKPIYSDGPS KAVIGLKKTL
201: VYYIGSAGKG SKTDWMMHEF RLPTANDTIP GGSTHRSPTP SSLLHAEVWT LCRIFKRNAS SRKYTPDSKE LASWERVKPQ QSNNREAAYI SFGDNESSTN
301: KINVMESKEN NERNVFQLHQ TPHPHQPIPM EYTSSTQVDN TVPHISNDNN MDDVNYENWD ELRSVVEFAF GPSSY
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.