Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040152.1-P | Field mustard | nucleus | 96.06 | 95.52 |
| CDY42902 | Canola | nucleus | 67.04 | 85.0 |
| CDY50880 | Canola | nucleus | 77.75 | 84.92 |
| AT3G04070.1 | Thale cress | nucleus | 84.23 | 83.29 |
| CDY26031 | Canola | cytosol | 28.17 | 66.23 |
| CDY26032 | Canola | cytosol | 28.17 | 62.11 |
| CDY22671 | Canola | nucleus | 32.96 | 58.79 |
| CDX82430 | Canola | nucleus | 32.96 | 58.79 |
| CDY40930 | Canola | cytosol | 35.49 | 46.67 |
| CDX95931 | Canola | cytosol | 35.21 | 46.3 |
| CDY51500 | Canola | nucleus | 35.21 | 45.96 |
| CDY07348 | Canola | nucleus | 34.93 | 45.76 |
| KRG94779 | Soybean | nucleus | 43.1 | 45.54 |
| CDX82432 | Canola | nucleus | 31.55 | 45.34 |
| KRH06741 | Soybean | nucleus | 44.23 | 44.48 |
| KRH70122 | Soybean | nucleus | 43.66 | 43.79 |
| KRH08465 | Soybean | nucleus | 43.38 | 42.42 |
| CDY40894 | Canola | nucleus | 30.99 | 42.31 |
| VIT_08s0007g07670.t01 | Wine grape | nucleus | 39.72 | 42.09 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 30.7 | 41.92 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 30.7 | 41.6 |
| CDY41537 | Canola | nucleus | 29.3 | 41.6 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 29.86 | 41.09 |
| CDY69545 | Canola | nucleus | 36.06 | 41.03 |
| CDY29303 | Canola | nucleus | 34.65 | 41.0 |
| CDX84443 | Canola | nucleus | 29.01 | 40.87 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 30.14 | 40.84 |
| CDX90054 | Canola | nucleus | 32.68 | 40.7 |
| CDX92828 | Canola | nucleus | 34.37 | 40.67 |
| CDY29836 | Canola | nucleus | 34.37 | 40.67 |
| CDY53806 | Canola | nucleus | 36.34 | 40.57 |
| CDY56427 | Canola | nucleus | 37.18 | 40.37 |
| CDX89253 | Canola | nucleus | 34.08 | 40.33 |
| CDY21567 | Canola | nucleus | 31.55 | 40.29 |
| CDY15158 | Canola | nucleus | 32.39 | 40.21 |
| CDY31350 | Canola | nucleus | 29.86 | 40.0 |
| CDX69919 | Canola | nucleus | 30.99 | 39.57 |
| CDX81120 | Canola | nucleus | 26.76 | 39.42 |
| CDY20131 | Canola | nucleus | 38.31 | 38.86 |
| CDX97675 | Canola | nucleus | 37.46 | 38.78 |
| CDY12886 | Canola | nucleus | 34.93 | 38.63 |
| CDY40970 | Canola | nucleus | 34.93 | 38.51 |
| CDX75833 | Canola | nucleus | 32.11 | 38.38 |
| CDX98562 | Canola | nucleus | 37.75 | 37.33 |
| CDX98560 | Canola | nucleus | 33.24 | 36.88 |
| CDX97674 | Canola | nucleus | 33.24 | 36.76 |
| CDY21844 | Canola | nucleus | 32.68 | 36.59 |
| CDY20109 | Canola | nucleus | 32.68 | 36.59 |
| CDY39846 | Canola | mitochondrion | 29.58 | 35.71 |
| CDX84050 | Canola | nucleus | 19.15 | 35.23 |
| CDY30373 | Canola | nucleus | 25.07 | 32.13 |
| CDY14865 | Canola | nucleus | 24.51 | 31.41 |
| CDY53654 | Canola | nucleus | 24.51 | 31.18 |
| CDY55499 | Canola | nucleus | 24.23 | 30.82 |
| CDY64562 | Canola | nucleus | 23.38 | 28.23 |
| CDY43391 | Canola | nucleus | 23.38 | 28.14 |
| CDY26794 | Canola | nucleus | 21.69 | 27.6 |
| CDY47486 | Canola | nucleus | 21.69 | 27.6 |
| CDY47485 | Canola | nucleus | 21.69 | 27.6 |
| CDY24238 | Canola | nucleus | 23.66 | 27.36 |
| CDX67438 | Canola | nucleus | 25.63 | 27.16 |
| CDY39487 | Canola | nucleus | 21.41 | 27.05 |
| CDY02222 | Canola | nucleus | 21.41 | 27.05 |
| CDY11662 | Canola | nucleus | 25.35 | 26.87 |
| CDX82569 | Canola | nucleus | 22.82 | 26.82 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 21.69 | 25.08 |
| CDY65270 | Canola | nucleus | 27.89 | 25.06 |
| CDY60122 | Canola | nucleus | 22.82 | 24.77 |
| CDY01755 | Canola | nucleus | 27.04 | 24.18 |
| CDY31385 | Canola | cytosol | 21.69 | 24.14 |
| CDY46433 | Canola | nucleus | 27.89 | 24.03 |
| CDX95910 | Canola | nucleus | 27.04 | 23.47 |
| CDY09368 | Canola | nucleus | 25.35 | 22.17 |
| CDY17437 | Canola | nucleus | 25.35 | 22.17 |
| CDY15835 | Canola | nucleus | 25.07 | 21.87 |
| CDY23551 | Canola | nucleus | 23.1 | 21.87 |
| CDY17595 | Canola | nucleus | 25.63 | 21.82 |
| CDY04129 | Canola | nucleus | 25.07 | 21.81 |
| CDY03050 | Canola | nucleus | 25.07 | 21.5 |
| CDY42810 | Canola | nucleus | 24.79 | 17.25 |
| CDX83510 | Canola | nucleus | 24.23 | 16.86 |
| CDX82429 | Canola | plastid | 3.66 | 12.15 |
| CDY16201 | Canola | plastid | 5.35 | 7.22 |
| CDY54324 | Canola | extracellular | 5.35 | 6.86 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078GZE8 | UniProt:A0A078GZE8 | EnsemblPlants:CDY29983 | ProteinID:CDY29983 |
| ProteinID:CDY29983.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00044505001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR45430 |
| SUPFAM:SSF101941 | UniParc:UPI0004EBFA67 | : | : | : | : |
Description
BnaC01g40250DBnaC01g40250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZE8]
Coordinates
chrLK032247:-:249943..251683
Molecular Weight (calculated)
40581.5 Da
IEP (calculated)
7.035
GRAVY (calculated)
-0.723
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MISKDPRSSL PPGFRFHPTD EELILYYLRK KVSSLPVPLS IIADVDIYKS DPWDLPAKAP FGEKEWYFFS PRDRKYPNGA RPNRAAASGY WKATGTDKLI
101: AVPNREGFNE NIGIKKALVF YTGKPPKGVK TNWIMHEYRL AESLSPKRVT PARNGSQVNN LGDRTLKSTE YSMRLDDWVL CRIYKKSHAS LSSPDVASAT
201: SDGQEHEENN NEPFVVSETL LPNLANDQTL KRQQSSFSNL LDATDLTFLT NFLNETPENR NESEFSFMFG DFSNPDIYGN HYLGHKLPQL SSPTSETRVI
301: GNKRERVDYA EEMMNNSKKI NNFSYNIDHW DHSLIQQSSF LNQELLISPH LQYQG
101: AVPNREGFNE NIGIKKALVF YTGKPPKGVK TNWIMHEYRL AESLSPKRVT PARNGSQVNN LGDRTLKSTE YSMRLDDWVL CRIYKKSHAS LSSPDVASAT
201: SDGQEHEENN NEPFVVSETL LPNLANDQTL KRQQSSFSNL LDATDLTFLT NFLNETPENR NESEFSFMFG DFSNPDIYGN HYLGHKLPQL SSPTSETRVI
301: GNKRERVDYA EEMMNNSKKI NNFSYNIDHW DHSLIQQSSF LNQELLISPH LQYQG
001: MISKDPRSSL PPGFRFHPTD EELILHYLRK KVSSSPVPLS IIADVDIYKS DPWDLPAKAP FGEKEWYFFS PRDRKYPNGA RPNRAAASGY WKATGTDKLI
101: AVPNGEGFHE NIGIKKALVF YRGKPPKGVK TNWIMHEYRL ADSLSPKRIN SSRSGGSEVN NNFGDRNSKE YSMRLDDWVL CRIYKKSHAS LSSPDVALVT
201: SNQEHEENDN EPFVDRGTFL PNLQNDQPLK RQKSSCSFSN LLDATDLTFL ANFLNETPEN RSESDFSFMI GNFSNPDIYG NHYLDQKLPQ LSSPTSETSG
301: IGSKRERVDF AEETINASKK MMNTYSYNNS IDQMDHSMMQ QPSFLNQELM MSSHLQYQG
101: AVPNGEGFHE NIGIKKALVF YRGKPPKGVK TNWIMHEYRL ADSLSPKRIN SSRSGGSEVN NNFGDRNSKE YSMRLDDWVL CRIYKKSHAS LSSPDVALVT
201: SNQEHEENDN EPFVDRGTFL PNLQNDQPLK RQKSSCSFSN LLDATDLTFL ANFLNETPEN RSESDFSFMI GNFSNPDIYG NHYLDQKLPQ LSSPTSETSG
301: IGSKRERVDF AEETINASKK MMNTYSYNNS IDQMDHSMMQ QPSFLNQELM MSSHLQYQG
Arabidopsis Description
NAC047NAC transcription factor 47 [Source:UniProtKB/Swiss-Prot;Acc:Q84TD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.