Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038663.1-P | Field mustard | nucleus | 99.6 | 99.6 |
| CDX84443 | Canola | nucleus | 95.6 | 94.84 |
| CDY31350 | Canola | nucleus | 86.8 | 81.89 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 77.6 | 75.19 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 78.0 | 74.43 |
| CDY39846 | Canola | mitochondrion | 86.4 | 73.47 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 76.4 | 72.9 |
| CDX69919 | Canola | nucleus | 80.4 | 72.3 |
| CDY21567 | Canola | nucleus | 79.2 | 71.22 |
| CDX81120 | Canola | nucleus | 68.0 | 70.54 |
| AT5G63790.2 | Thale cress | cytosol | 84.4 | 65.53 |
| CDY26031 | Canola | cytosol | 38.8 | 64.24 |
| CDY26032 | Canola | cytosol | 38.4 | 59.63 |
| CDX82430 | Canola | nucleus | 45.2 | 56.78 |
| GSMUA_Achr10P... | Banana | nucleus | 57.6 | 56.47 |
| KRH63977 | Soybean | nucleus | 64.4 | 55.33 |
| KRH59618 | Soybean | nucleus | 65.6 | 55.03 |
| CDY40894 | Canola | nucleus | 57.2 | 55.0 |
| CDY22671 | Canola | nucleus | 43.6 | 54.77 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 56.4 | 54.23 |
| KRH53959 | Soybean | nucleus | 63.6 | 53.9 |
| Solyc04g009440.2.1 | Tomato | nucleus | 64.0 | 53.16 |
| CDY15158 | Canola | nucleus | 60.4 | 52.8 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 62.0 | 52.72 |
| CDX90054 | Canola | nucleus | 60.0 | 52.63 |
| PGSC0003DMT400082472 | Potato | nucleus | 63.6 | 52.48 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 57.2 | 52.19 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 56.8 | 51.82 |
| KXG33829 | Sorghum | nucleus | 60.0 | 51.55 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 60.0 | 51.19 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 54.8 | 51.12 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 59.6 | 50.85 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 60.0 | 50.85 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 60.4 | 50.67 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 60.4 | 50.5 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 60.4 | 50.5 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 60.0 | 50.0 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 60.0 | 49.83 |
| Os01t0884300-01 | Rice | nucleus | 60.0 | 49.51 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 56.8 | 48.97 |
| CDX84050 | Canola | nucleus | 37.6 | 48.7 |
| CDX82432 | Canola | nucleus | 43.6 | 44.13 |
| Os11t0184900-02 | Rice | nucleus | 58.0 | 44.07 |
| Zm00001d038221_P001 | Maize | plastid | 58.8 | 43.36 |
| KXG22031 | Sorghum | nucleus | 58.8 | 43.11 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 57.6 | 42.99 |
| TraesCS4D01G094400.1 | Wheat | nucleus | 57.6 | 42.99 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 57.2 | 42.81 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 56.8 | 42.77 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 56.4 | 42.34 |
| Zm00001d000112_P001 | Maize | nucleus | 56.4 | 39.28 |
| CDY40930 | Canola | cytosol | 41.2 | 38.15 |
| CDX95931 | Canola | cytosol | 40.8 | 37.78 |
| CDY07348 | Canola | nucleus | 40.4 | 37.27 |
| CDY51500 | Canola | nucleus | 40.4 | 37.13 |
| CDX75833 | Canola | nucleus | 44.0 | 37.04 |
| OQU83033 | Sorghum | nucleus | 56.8 | 36.98 |
| CDX89253 | Canola | nucleus | 44.0 | 36.67 |
| CDX92828 | Canola | nucleus | 44.0 | 36.67 |
| CDY29303 | Canola | nucleus | 44.0 | 36.67 |
| CDY29836 | Canola | nucleus | 44.0 | 36.67 |
| CDY69545 | Canola | nucleus | 45.2 | 36.22 |
| CDY12886 | Canola | nucleus | 46.4 | 36.14 |
| CDY42902 | Canola | nucleus | 40.4 | 36.07 |
| CDY40970 | Canola | nucleus | 46.4 | 36.02 |
| CDY53806 | Canola | nucleus | 44.8 | 35.22 |
| CDY20109 | Canola | nucleus | 44.4 | 35.02 |
| CDY21844 | Canola | nucleus | 44.4 | 35.02 |
| CDX98560 | Canola | nucleus | 44.8 | 35.0 |
| CDX97674 | Canola | nucleus | 44.8 | 34.89 |
| CDY56427 | Canola | nucleus | 45.6 | 34.86 |
| CDX97675 | Canola | nucleus | 45.6 | 33.24 |
| CDY20131 | Canola | nucleus | 45.6 | 32.57 |
| CDY50880 | Canola | nucleus | 40.8 | 31.38 |
| CDX98562 | Canola | nucleus | 44.4 | 30.92 |
| CDY29983 | Canola | nucleus | 41.6 | 29.3 |
| CDY30373 | Canola | nucleus | 32.4 | 29.24 |
| CDY14865 | Canola | nucleus | 31.6 | 28.52 |
| CDY26794 | Canola | nucleus | 31.6 | 28.32 |
| CDY47485 | Canola | nucleus | 31.6 | 28.32 |
| CDY47486 | Canola | nucleus | 31.6 | 28.32 |
| CDY53654 | Canola | nucleus | 30.8 | 27.6 |
| CDY55499 | Canola | nucleus | 30.8 | 27.6 |
| CDY64562 | Canola | nucleus | 32.0 | 27.21 |
| CDY39487 | Canola | nucleus | 30.0 | 26.69 |
| CDY43391 | Canola | nucleus | 31.2 | 26.44 |
| CDY02222 | Canola | nucleus | 29.6 | 26.33 |
| CDX82569 | Canola | nucleus | 31.6 | 26.16 |
| CDY24238 | Canola | nucleus | 31.6 | 25.73 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 30.8 | 25.08 |
| CDY60122 | Canola | nucleus | 32.4 | 24.77 |
| CDX67438 | Canola | nucleus | 32.8 | 24.48 |
| CDY11662 | Canola | nucleus | 32.8 | 24.48 |
| CDY31385 | Canola | cytosol | 30.8 | 24.14 |
| CDY04129 | Canola | nucleus | 35.6 | 21.81 |
| CDY17437 | Canola | nucleus | 35.2 | 21.67 |
| CDY15835 | Canola | nucleus | 34.8 | 21.38 |
| CDY23551 | Canola | nucleus | 32.0 | 21.33 |
| CDY65270 | Canola | nucleus | 33.6 | 21.27 |
| CDY03050 | Canola | nucleus | 35.2 | 21.26 |
| CDY09368 | Canola | nucleus | 34.4 | 21.18 |
| CDY17595 | Canola | nucleus | 35.2 | 21.1 |
| CDY01755 | Canola | nucleus | 33.2 | 20.91 |
| CDY46433 | Canola | nucleus | 33.6 | 20.39 |
| CDX95910 | Canola | nucleus | 33.2 | 20.29 |
| CDX83510 | Canola | nucleus | 32.8 | 16.08 |
| CDY42810 | Canola | nucleus | 32.8 | 16.08 |
| CDX82429 | Canola | plastid | 2.0 | 4.67 |
| CDY54324 | Canola | extracellular | 3.6 | 3.25 |
| CDY16201 | Canola | plastid | 2.8 | 2.66 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078HUQ6 | UniProt:A0A078HUQ6 | EnsemblPlants:CDY41537 | ProteinID:CDY41537 |
| ProteinID:CDY41537.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00073164001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 |
| PANTHER:PTHR31719:SF16 | SUPFAM:SSF101941 | UniParc:UPI0004EF0F0F | SEG:seg | : | : |
Description
BnaA06g22900DBnaA06g22900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUQ6]
Coordinates
chrLK032499:-:284197..285120
Molecular Weight (calculated)
28713.9 Da
IEP (calculated)
6.903
GRAVY (calculated)
-0.598
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAELNLPEG FRFHPTDEEL VKFYLCRRCA SEPISVLVIA EIDLYKFNPW ELPEMALYGE KEWYFFSPRD RKYPNGSRPN RSAGTGYWKA TGADKPIGKP
101: KTLGIKKALV FYAGKAPRGV KTNWIMHEYR LANVDRSASS NKKNSLRLDD WVLCRIYNKK GTMEKCYPAV VTTISTSDSS SHVISPDVGT CSDNCESKWV
201: DDLEDEFMFD STLQNDPFVP QFLYQSEFAT PFEDPPEQKP FLKWSFGHQG
101: KTLGIKKALV FYAGKAPRGV KTNWIMHEYR LANVDRSASS NKKNSLRLDD WVLCRIYNKK GTMEKCYPAV VTTISTSDSS SHVISPDVGT CSDNCESKWV
201: DDLEDEFMFD STLQNDPFVP QFLYQSEFAT PFEDPPEQKP FLKWSFGHQG
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.