Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G08790.1 | KRH14106 | AT5G35750.1 | 18642946 |
| AT5G08790.1 | KRH74010 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63977 | Soybean | nucleus | 93.22 | 94.5 |
| KRH59618 | Soybean | nucleus | 75.93 | 75.17 |
| KRH17977 | Soybean | nucleus | 59.66 | 65.67 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 56.61 | 64.73 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 64.41 | 64.63 |
| KRH16387 | Soybean | nucleus | 61.02 | 64.29 |
| GSMUA_Achr10P... | Banana | nucleus | 55.25 | 63.92 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 56.61 | 63.74 |
| Bra038663.1-P | Field mustard | nucleus | 53.9 | 63.6 |
| CDY41537 | Canola | nucleus | 53.9 | 63.6 |
| CDY21567 | Canola | nucleus | 59.66 | 63.31 |
| KRH53247 | Soybean | nucleus | 64.07 | 63.21 |
| Solyc04g009440.2.1 | Tomato | nucleus | 64.41 | 63.12 |
| CDX84443 | Canola | nucleus | 53.9 | 63.1 |
| CDY31350 | Canola | nucleus | 56.27 | 62.64 |
| CDX69919 | Canola | nucleus | 58.98 | 62.59 |
| Bra009370.1-P | Field mustard | nucleus | 58.98 | 62.59 |
| AT5G08790.1 | Thale cress | nucleus | 60.0 | 62.54 |
| PGSC0003DMT400082472 | Potato | nucleus | 64.07 | 62.38 |
| KRH64668 | Soybean | nucleus | 63.39 | 62.33 |
| Bra029201.1-P | Field mustard | cytosol | 55.93 | 62.26 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 55.25 | 62.21 |
| Bra006015.1-P | Field mustard | cytosol, nucleus, plastid | 58.98 | 62.14 |
| Bra028645.1-P | Field mustard | nucleus | 57.97 | 61.51 |
| CDX81120 | Canola | nucleus | 50.17 | 61.41 |
| KXG33829 | Sorghum | nucleus | 60.0 | 60.82 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 55.93 | 60.22 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 60.0 | 60.0 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 54.92 | 59.12 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 59.66 | 59.06 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 53.22 | 58.58 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 59.32 | 58.53 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 59.32 | 58.53 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 57.97 | 58.36 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 57.63 | 58.02 |
| Os01t0884300-01 | Rice | nucleus | 59.32 | 57.76 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 58.31 | 57.33 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 57.97 | 56.81 |
| KRH32805 | Soybean | nucleus | 26.1 | 56.62 |
| KRH32801 | Soybean | nucleus | 24.07 | 55.47 |
| CDY39846 | Canola | mitochondrion | 55.25 | 55.44 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 53.9 | 54.83 |
| AT5G63790.2 | Thale cress | cytosol | 56.95 | 52.17 |
| Zm00001d038221_P001 | Maize | plastid | 57.97 | 50.44 |
| Os11t0184900-02 | Rice | nucleus | 55.59 | 49.85 |
| KXG22031 | Sorghum | nucleus | 56.95 | 49.27 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 55.25 | 48.8 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 54.92 | 48.8 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 55.25 | 48.66 |
| TraesCS4D01G094400.1 | Wheat | nucleus | 55.25 | 48.66 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 54.92 | 48.65 |
| KRH57817 | Soybean | nucleus | 28.47 | 47.46 |
| KRH50570 | Soybean | nucleus | 37.29 | 47.21 |
| Zm00001d000112_P001 | Maize | nucleus | 56.27 | 46.24 |
| KRH26008 | Soybean | nucleus | 28.14 | 46.11 |
| OQU83033 | Sorghum | nucleus | 55.59 | 42.71 |
| KRH70773 | Soybean | cytosol | 38.98 | 41.22 |
| KRH74907 | Soybean | nucleus | 38.64 | 40.86 |
| KRH55355 | Soybean | nucleus | 44.41 | 38.87 |
| KRH26056 | Soybean | nucleus | 44.75 | 38.82 |
| KRG89575 | Soybean | nucleus | 36.27 | 38.21 |
| KRH22137 | Soybean | nucleus | 44.41 | 38.19 |
| KRH27201 | Soybean | nucleus | 44.07 | 37.68 |
| KRG94779 | Soybean | nucleus | 41.02 | 36.01 |
| KRH49988 | Soybean | nucleus | 43.73 | 35.64 |
| KRH10810 | Soybean | nucleus | 42.71 | 35.59 |
| KRH06741 | Soybean | nucleus | 42.37 | 35.41 |
| KRH55357 | Soybean | nucleus | 43.73 | 35.05 |
| KRH26054 | Soybean | nucleus | 42.71 | 35.0 |
| KRH70122 | Soybean | nucleus | 41.69 | 34.75 |
| KRH08465 | Soybean | nucleus | 42.37 | 34.44 |
| KRH21510 | Soybean | nucleus | 42.03 | 34.16 |
| KRH22138 | Soybean | nucleus | 43.39 | 34.13 |
| KRH27199 | Soybean | nucleus | 43.39 | 34.13 |
| KRH67671 | Soybean | cytosol | 32.88 | 33.8 |
| KRG95963 | Soybean | nucleus | 36.27 | 31.75 |
| KRG98971 | Soybean | nucleus | 31.53 | 30.59 |
| KRH46012 | Soybean | nucleus | 31.53 | 30.59 |
| KRH22920 | Soybean | nucleus | 34.92 | 29.51 |
| KRH26398 | Soybean | nucleus | 34.58 | 29.23 |
| KRH73618 | Soybean | cytosol | 31.19 | 28.75 |
| KRH14512 | Soybean | nucleus | 31.19 | 28.22 |
| KRH13702 | Soybean | nucleus | 30.17 | 27.99 |
| KRH29090 | Soybean | nucleus | 27.46 | 26.82 |
| KRH24118 | Soybean | cytosol | 26.78 | 26.6 |
| KRG93526 | Soybean | nucleus | 30.51 | 24.52 |
| KRH01889 | Soybean | nucleus | 32.2 | 23.57 |
| KRH51263 | Soybean | nucleus | 31.86 | 23.5 |
| KRH18479 | Soybean | nucleus | 29.83 | 23.16 |
| KRG99080 | Soybean | nucleus | 29.15 | 21.45 |
| KRH45921 | Soybean | nucleus | 29.15 | 20.82 |
| KRH70719 | Soybean | nucleus | 31.19 | 20.81 |
| KRH74854 | Soybean | nucleus | 30.85 | 20.78 |
Protein Annotations
| EntrezGene:100779770 | MapMan:15.5.17 | Gene3D:3.30.310.150 | EMBL:ACUP02003491 | EnsemblPlantsGene:GLYMA_06G157400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | EMBL:JX569046 | EnsemblPlants:KRH53959 |
| ProteinID:KRH53959 | ProteinID:KRH53959.1 | EMBL:KT031212 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31719 | PANTHER:PTHR31719:SF16 | SUPFAM:SSF101941 | UniProt:U3LZE5 | UniParc:UPI000189D251 |
Description
hypothetical protein
Coordinates
chr6:+:12936973..12938815
Molecular Weight (calculated)
34175.3 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.810
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGELELPPG FRFHPTDEEL VNHYLCRKCA GQPIAVPIIK EVDLYKFDPW QLPEIGYYGE KEWYFFSPRD RKYPNGSRPN RAAGSGYWKA TGADKAIGKP
101: KALGIKKALV FYAGKAPKGV KTNWIMHEYR LANVDRSASK KNNNNLRLDD WVLCRIYNKK GKIEKYNTTA PKMNLEMIHS FEHENETKPE IHKLGNEQLL
201: YTETSDSVPR LHTDSSSSEH VVSPDVRCER EVQSDPKWNN DDYDLGLQLE NAFDFQFNYL DDNNLSVDDD PFGTVQYQMG QLSPLQDMFM YLQKM
101: KALGIKKALV FYAGKAPKGV KTNWIMHEYR LANVDRSASK KNNNNLRLDD WVLCRIYNKK GKIEKYNTTA PKMNLEMIHS FEHENETKPE IHKLGNEQLL
201: YTETSDSVPR LHTDSSSSEH VVSPDVRCER EVQSDPKWNN DDYDLGLQLE NAFDFQFNYL DDNNLSVDDD PFGTVQYQMG QLSPLQDMFM YLQKM
001: MKSELNLPAG FRFHPTDEEL VKFYLCRKCA SEQISAPVIA EIDLYKFNPW ELPEMSLYGE KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
Arabidopsis Description
NAC081Protein ATAF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.