Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G263800.1 | Wheat | nucleus | 97.67 | 98.0 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 95.02 | 97.61 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 93.69 | 96.25 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 75.08 | 75.84 |
| Zm00001d038221_P001 | Maize | plastid | 82.72 | 73.45 |
| KXG22031 | Sorghum | nucleus | 81.73 | 72.14 |
| KRH17977 | Soybean | nucleus | 56.15 | 63.06 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 57.14 | 62.77 |
| KRH16387 | Soybean | nucleus | 57.14 | 61.43 |
| VIT_18s0001g02300.t01 | Wine grape | nucleus | 60.8 | 61.2 |
| Solyc06g060230.2.1 | Tomato | nucleus | 59.14 | 60.14 |
| Bra038663.1-P | Field mustard | nucleus | 49.83 | 60.0 |
| CDY41537 | Canola | nucleus | 49.83 | 60.0 |
| Bra033239.1-P | Field mustard | nucleus | 56.48 | 59.65 |
| CDX90054 | Canola | nucleus | 56.48 | 59.65 |
| CDX84443 | Canola | nucleus | 49.83 | 59.52 |
| AT1G01720.1 | Thale cress | nucleus | 57.14 | 59.52 |
| PGSC0003DMT400045294 | Potato | nucleus | 58.47 | 59.46 |
| PGSC0003DMT400023917 | Potato | nucleus | 57.48 | 59.45 |
| CDY15158 | Canola | nucleus | 56.15 | 59.09 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 50.5 | 58.91 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 57.48 | 58.84 |
| Solyc11g017470.1.1 | Tomato | nucleus | 56.81 | 58.76 |
| KRH63977 | Soybean | nucleus | 56.48 | 58.42 |
| KRH64668 | Soybean | nucleus | 57.81 | 58.0 |
| KRH53959 | Soybean | nucleus | 56.81 | 57.97 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 50.17 | 57.63 |
| KRH53247 | Soybean | nucleus | 57.14 | 57.53 |
| Bra029201.1-P | Field mustard | cytosol | 50.5 | 57.36 |
| AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 48.17 | 57.31 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 49.83 | 57.25 |
| KRH59618 | Soybean | nucleus | 56.48 | 57.05 |
| CDY31350 | Canola | nucleus | 50.17 | 56.98 |
| Solyc04g009440.2.1 | Tomato | nucleus | 56.48 | 56.48 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 54.15 | 56.21 |
| CDY40894 | Canola | nucleus | 48.51 | 56.15 |
| Bra028645.1-P | Field mustard | nucleus | 51.83 | 56.12 |
| CDY21567 | Canola | nucleus | 51.83 | 56.12 |
| CDX81120 | Canola | nucleus | 44.85 | 56.02 |
| PGSC0003DMT400082472 | Potato | nucleus | 56.15 | 55.78 |
| Bra008309.1-P | Field mustard | cytosol, nucleus, plastid | 48.17 | 55.77 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 48.17 | 55.77 |
| CDX69919 | Canola | nucleus | 51.49 | 55.76 |
| Bra009370.1-P | Field mustard | nucleus | 51.49 | 55.76 |
| Bra006015.1-P | Field mustard | cytosol, nucleus, plastid | 51.49 | 55.36 |
| AT5G08790.1 | Thale cress | nucleus | 51.83 | 55.12 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 56.81 | 51.2 |
| CDY39846 | Canola | mitochondrion | 49.83 | 51.02 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 55.48 | 50.15 |
| CDX84050 | Canola | nucleus | 30.9 | 48.19 |
| AT5G63790.2 | Thale cress | cytosol | 51.16 | 47.83 |
| TraesCS6B01G075200.1 | Wheat | nucleus | 40.2 | 42.46 |
| TraesCS3B01G371200.1 | Wheat | nucleus | 41.53 | 40.06 |
| TraesCS5B01G480900.2 | Wheat | nucleus | 42.86 | 39.45 |
| TraesCS4B01G173600.1 | Wheat | nucleus | 38.21 | 33.24 |
| TraesCS3B01G093300.1 | Wheat | nucleus | 38.87 | 33.14 |
| TraesCS2B01G119100.1 | Wheat | nucleus | 38.87 | 32.87 |
| TraesCS2B01G119000.1 | Wheat | nucleus | 38.21 | 32.86 |
| TraesCS3B01G194000.1 | Wheat | nucleus | 33.22 | 32.47 |
| TraesCS5B01G142100.1 | Wheat | nucleus | 37.21 | 31.64 |
| TraesCS2B01G228900.1 | Wheat | nucleus | 38.87 | 28.82 |
| TraesCS7B01G472200.1 | Wheat | cytosol, nucleus, plastid | 27.91 | 28.28 |
| TraesCS7B01G472600.1 | Wheat | cytosol, nucleus, plastid | 27.24 | 27.33 |
| TraesCS2B01G076000.1 | Wheat | nucleus | 27.57 | 24.7 |
| TraesCS4B01G328600.1 | Wheat | nucleus | 27.91 | 23.93 |
| TraesCS4B01G329100.1 | Wheat | nucleus | 27.91 | 23.86 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 26.91 | 23.82 |
| TraesCS4B01G328800.1 | Wheat | nucleus | 27.24 | 23.63 |
| TraesCS4B01G328900.1 | Wheat | nucleus | 27.57 | 23.58 |
| TraesCS4B01G328700.1 | Wheat | nucleus | 27.57 | 23.51 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 27.24 | 23.43 |
| TraesCS2B01G076100.1 | Wheat | nucleus | 27.24 | 23.3 |
| TraesCS7B01G219400.1 | Wheat | nucleus | 29.9 | 23.14 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 26.58 | 22.79 |
| TraesCS1B01G272600.1 | Wheat | nucleus | 28.9 | 22.48 |
| TraesCS5B01G226800.1 | Wheat | nucleus | 28.57 | 21.83 |
| TraesCS3B01G436900.1 | Wheat | nucleus | 29.57 | 21.6 |
| TraesCS6B01G335700.1 | Wheat | nucleus | 27.91 | 21.59 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 26.91 | 21.49 |
| TraesCS2B01G075900.1 | Wheat | nucleus | 27.24 | 21.19 |
| TraesCS5B01G338700.1 | Wheat | nucleus | 26.58 | 21.0 |
| TraesCS5B01G338400.1 | Wheat | nucleus | 26.58 | 21.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31719 | PANTHER:PTHR31719:SF43 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS1B01G274300 | EnsemblPlants:TraesCS1B01G274300.1 | SEG:seg |
Description
No Description!
Coordinates
chr1B:-:481540913..481542400
Molecular Weight (calculated)
33093.3 Da
IEP (calculated)
9.049
GRAVY (calculated)
-0.545
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGGGGGSA ATQGQQDLQL PPGFRFHPTD EELVMHYLCR RCAGLPISVP IIAEVDLYKF DPWQLPRMAL YGEKEWYFFS PRDRKYPNGS RPNRSAGTGY
101: WKATGADKPV GTPKPLAIKK ALVFYAGKAP KGDKTNWIMH EYRLADVDRS ARKKNSLRLD DWVLCRIYNK KGASERPSAG DRTASASPGH AAVGSPPEQK
201: LALLRPYAPQ PFSDLAAYYE VRPSDSMPRA HADSSCSEHV LTASCERPEV QSQPKISEWE RTFATATPGV NPAGLMLDPA AGLPAGDPLL QDILMYWGKP
301: F
101: WKATGADKPV GTPKPLAIKK ALVFYAGKAP KGDKTNWIMH EYRLADVDRS ARKKNSLRLD DWVLCRIYNK KGASERPSAG DRTASASPGH AAVGSPPEQK
201: LALLRPYAPQ PFSDLAAYYE VRPSDSMPRA HADSSCSEHV LTASCERPEV QSQPKISEWE RTFATATPGV NPAGLMLDPA AGLPAGDPLL QDILMYWGKP
301: F
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.