Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40894 | Canola | nucleus | 97.41 | 72.31 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 96.89 | 71.92 |
| AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 78.24 | 59.68 |
| KRH17977 | Soybean | nucleus | 57.51 | 41.42 |
| KRH16387 | Soybean | nucleus | 59.59 | 41.07 |
| CDX81120 | Canola | nucleus | 50.26 | 40.25 |
| VIT_18s0001g02300.t01 | Wine grape | nucleus | 61.66 | 39.8 |
| CDY15158 | Canola | nucleus | 58.55 | 39.51 |
| CDX90054 | Canola | nucleus | 58.03 | 39.3 |
| KRH64668 | Soybean | nucleus | 60.62 | 39.0 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 51.81 | 38.76 |
| PGSC0003DMT400023917 | Potato | nucleus | 58.03 | 38.49 |
| KRH53247 | Soybean | nucleus | 59.59 | 38.46 |
| GSMUA_Achr10P... | Banana | nucleus | 50.78 | 38.43 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 51.81 | 38.17 |
| Solyc11g017470.1.1 | Tomato | nucleus | 57.51 | 38.14 |
| PGSC0003DMT400045294 | Potato | nucleus | 58.03 | 37.84 |
| Solyc06g060230.2.1 | Tomato | nucleus | 58.03 | 37.84 |
| CDX84443 | Canola | nucleus | 49.22 | 37.7 |
| CDY41537 | Canola | nucleus | 48.7 | 37.6 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 50.78 | 37.4 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 51.3 | 36.94 |
| CDX69919 | Canola | nucleus | 52.85 | 36.69 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 51.81 | 36.5 |
| CDY21567 | Canola | nucleus | 52.33 | 36.33 |
| CDY31350 | Canola | nucleus | 49.74 | 36.23 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 53.89 | 35.86 |
| KXG33829 | Sorghum | nucleus | 52.33 | 34.71 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 49.22 | 34.67 |
| CDY26031 | Canola | cytosol | 26.94 | 34.44 |
| Os01t0884300-01 | Rice | nucleus | 53.89 | 34.32 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 52.33 | 34.24 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 52.85 | 34.11 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 52.85 | 34.11 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 52.33 | 33.89 |
| CDX82430 | Canola | nucleus | 33.68 | 32.66 |
| CDY39846 | Canola | mitochondrion | 49.74 | 32.65 |
| CDY22671 | Canola | nucleus | 33.16 | 32.16 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 48.7 | 32.08 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 48.7 | 32.08 |
| CDY26032 | Canola | cytosol | 26.42 | 31.68 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 48.7 | 31.33 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 53.89 | 31.23 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 48.19 | 30.9 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 50.26 | 29.22 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 50.26 | 29.04 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 50.26 | 28.96 |
| TraesCS4D01G094400.1 | Wheat | nucleus | 50.26 | 28.96 |
| Os11t0184900-02 | Rice | nucleus | 48.7 | 28.57 |
| Zm00001d038221_P001 | Maize | plastid | 49.74 | 28.32 |
| KXG22031 | Sorghum | nucleus | 48.7 | 27.57 |
| Zm00001d000112_P001 | Maize | nucleus | 50.26 | 27.02 |
| CDX82432 | Canola | nucleus | 34.2 | 26.72 |
| CDY07348 | Canola | nucleus | 35.23 | 25.09 |
| CDY51500 | Canola | nucleus | 35.23 | 25.0 |
| CDY40930 | Canola | cytosol | 34.72 | 24.81 |
| OQU83033 | Sorghum | nucleus | 49.22 | 24.74 |
| CDX95931 | Canola | cytosol | 34.2 | 24.44 |
| CDY69545 | Canola | nucleus | 37.82 | 23.4 |
| CDY12886 | Canola | nucleus | 38.34 | 23.05 |
| CDY29303 | Canola | nucleus | 35.75 | 23.0 |
| CDY40970 | Canola | nucleus | 38.34 | 22.98 |
| CDX75833 | Canola | nucleus | 35.23 | 22.9 |
| CDX89253 | Canola | nucleus | 35.23 | 22.67 |
| CDX92828 | Canola | nucleus | 35.23 | 22.67 |
| CDY29836 | Canola | nucleus | 35.23 | 22.67 |
| CDY53806 | Canola | nucleus | 37.31 | 22.64 |
| CDY42902 | Canola | nucleus | 32.12 | 22.14 |
| CDY20109 | Canola | nucleus | 36.27 | 22.08 |
| CDY21844 | Canola | nucleus | 36.27 | 22.08 |
| CDX97674 | Canola | nucleus | 36.27 | 21.81 |
| CDX98560 | Canola | nucleus | 35.75 | 21.56 |
| CDY56427 | Canola | nucleus | 35.23 | 20.8 |
| CDX97675 | Canola | nucleus | 36.79 | 20.7 |
| CDY50880 | Canola | nucleus | 34.72 | 20.62 |
| CDY20131 | Canola | nucleus | 36.27 | 20.0 |
| CDX98562 | Canola | nucleus | 35.75 | 19.22 |
| CDY29983 | Canola | nucleus | 35.23 | 19.15 |
| CDY26794 | Canola | nucleus | 25.91 | 17.92 |
| CDY47485 | Canola | nucleus | 25.91 | 17.92 |
| CDY47486 | Canola | nucleus | 25.91 | 17.92 |
| CDY39487 | Canola | nucleus | 24.87 | 17.08 |
| CDY14865 | Canola | nucleus | 24.35 | 16.97 |
| CDY02222 | Canola | nucleus | 24.35 | 16.73 |
| CDY30373 | Canola | nucleus | 23.83 | 16.61 |
| CDY53654 | Canola | nucleus | 23.32 | 16.13 |
| CDY55499 | Canola | nucleus | 23.32 | 16.13 |
| CDY64562 | Canola | nucleus | 23.32 | 15.31 |
| CDY43391 | Canola | nucleus | 22.8 | 14.92 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 23.32 | 14.66 |
| CDY24238 | Canola | nucleus | 23.32 | 14.66 |
| CDX82569 | Canola | nucleus | 22.8 | 14.57 |
| CDY31385 | Canola | cytosol | 23.32 | 14.11 |
| CDY60122 | Canola | nucleus | 23.83 | 14.07 |
| CDX67438 | Canola | nucleus | 22.28 | 12.84 |
| CDY11662 | Canola | nucleus | 22.28 | 12.84 |
| CDY23551 | Canola | nucleus | 23.83 | 12.27 |
| CDY65270 | Canola | nucleus | 24.87 | 12.15 |
| CDY03050 | Canola | nucleus | 25.39 | 11.84 |
| CDY17437 | Canola | nucleus | 24.87 | 11.82 |
| CDY15835 | Canola | nucleus | 24.87 | 11.79 |
| CDY04129 | Canola | nucleus | 24.87 | 11.76 |
| CDY17595 | Canola | nucleus | 24.87 | 11.51 |
| CDY46433 | Canola | nucleus | 24.35 | 11.41 |
| CDY09368 | Canola | nucleus | 23.83 | 11.33 |
| CDY01755 | Canola | nucleus | 22.28 | 10.83 |
| CDX95910 | Canola | nucleus | 22.28 | 10.51 |
| CDX83510 | Canola | nucleus | 23.32 | 8.82 |
| CDY42810 | Canola | nucleus | 23.32 | 8.82 |
| CDY16201 | Canola | plastid | 5.7 | 4.18 |
| CDX82429 | Canola | plastid | 2.07 | 3.74 |
| CDY54324 | Canola | extracellular | 5.18 | 3.61 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078D4J1 | EnsemblPlants:CDX84050 | ProteinID:CDX84050 | ProteinID:CDX84050.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00139904001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 |
| PANTHER:PTHR31719:SF16 | SUPFAM:SSF101941 | UniParc:UPI0004EED874 | : | : | : |
Description
BnaC08g07270D
Coordinates
chrLK031835:-:252817..253681
Molecular Weight (calculated)
21597.0 Da
IEP (calculated)
10.184
GRAVY (calculated)
-0.566
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLAREEKYP NGSRPNRAAG TGYWKATGAD KPIGRPKPVG IKKALVFYSG KPPRGEKTNW IMHEYRLADV DRSVRKGNSL RLDDWVLCRI YNKKGVIEKR
101: RSEVANGHVM APVMLNFDKP ELIGGGSSCS DQRVVSPEFR CGAKTEPSRC SNALEVPFNY VDAIADNEIV SRLLGGNQMW STLDPLVVRQ RTF
101: RSEVANGHVM APVMLNFDKP ELIGGGSSCS DQRVVSPEFR CGAKTEPSRC SNALEVPFNY VDAIADNEIV SRLLGGNQMW STLDPLVVRQ RTF
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.