Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004403.1-P | Field mustard | nucleus | 88.67 | 86.91 |
| CDX95910 | Canola | nucleus | 88.92 | 86.31 |
| Os02t0745250-00 | Rice | nucleus | 30.23 | 64.17 |
| AT1G26870.1 | Thale cress | nucleus | 65.74 | 62.44 |
| CDY46433 | Canola | nucleus | 63.22 | 60.92 |
| CDY65270 | Canola | nucleus | 59.45 | 59.75 |
| HORVU6Hr1G075830.1 | Barley | nucleus | 36.02 | 54.79 |
| CDY26031 | Canola | cytosol | 19.65 | 51.66 |
| CDY26032 | Canola | cytosol | 19.65 | 48.45 |
| CDX82430 | Canola | nucleus | 21.91 | 43.72 |
| TraesCS6D01G286300.1 | Wheat | nucleus | 42.57 | 43.33 |
| EES07261 | Sorghum | nucleus | 42.32 | 43.3 |
| TraesCS6A01G307200.1 | Wheat | nucleus | 42.32 | 43.19 |
| TraesCS6B01G335700.1 | Wheat | nucleus | 42.32 | 43.19 |
| CDX67438 | Canola | nucleus | 36.27 | 42.99 |
| CDY11662 | Canola | nucleus | 36.27 | 42.99 |
| CDY22671 | Canola | nucleus | 21.41 | 42.71 |
| TraesCS2B01G076000.1 | Wheat | nucleus | 34.01 | 40.18 |
| HORVU2Hr1G011360.1 | Barley | nucleus | 36.02 | 39.5 |
| HORVU2Hr1G011390.1 | Barley | nucleus | 36.02 | 39.5 |
| TraesCS2B01G076100.1 | Wheat | nucleus | 35.01 | 39.49 |
| TraesCS2D01G061600.1 | Wheat | nucleus | 35.26 | 38.89 |
| CDY55499 | Canola | nucleus | 27.2 | 38.71 |
| CDY53654 | Canola | nucleus | 26.95 | 38.35 |
| Zm00001d050410_P001 | Maize | nucleus | 36.52 | 38.06 |
| HORVU2Hr1G011370.1 | Barley | nucleus | 37.03 | 37.98 |
| TraesCS2D01G061500.1 | Wheat | nucleus | 37.03 | 37.98 |
| CDY30373 | Canola | nucleus | 26.45 | 37.91 |
| TraesCS2A01G063300.1 | Wheat | nucleus | 36.27 | 37.8 |
| EES13897 | Sorghum | nucleus | 36.52 | 37.76 |
| Os08t0436700-01 | Rice | nucleus | 36.52 | 37.66 |
| TraesCS2A01G063200.1 | Wheat | nucleus | 36.52 | 37.47 |
| TraesCS5B01G338400.1 | Wheat | nucleus | 35.77 | 37.27 |
| TraesCS5B01G338700.1 | Wheat | nucleus | 35.77 | 37.27 |
| TraesCS5D01G344100.1 | Wheat | nucleus | 35.77 | 37.27 |
| TraesCS2B01G075900.1 | Wheat | nucleus | 36.27 | 37.21 |
| CDY14865 | Canola | nucleus | 25.94 | 37.18 |
| Zm00001d020446_P001 | Maize | nucleus | 36.78 | 37.06 |
| TraesCS5A01G339600.1 | Wheat | nucleus | 35.52 | 37.01 |
| Zm00001d032182_P001 | Maize | nucleus | 36.52 | 36.99 |
| TraesCS5D01G472600.1 | Wheat | nucleus | 35.01 | 36.48 |
| TraesCS2A01G063400.1 | Wheat | nucleus | 25.69 | 36.3 |
| OQU89481 | Sorghum | nucleus | 36.78 | 36.23 |
| CDY16201 | Canola | plastid | 23.68 | 35.74 |
| CDY54324 | Canola | extracellular | 24.94 | 35.74 |
| GSMUA_Achr10P... | Banana | cytosol | 37.53 | 35.31 |
| CDY42902 | Canola | nucleus | 23.93 | 33.93 |
| Zm00001d018038_P001 | Maize | nucleus | 42.07 | 33.87 |
| CDX82432 | Canola | nucleus | 20.91 | 33.6 |
| CDX92828 | Canola | nucleus | 25.19 | 33.33 |
| CDY43391 | Canola | nucleus | 24.69 | 33.22 |
| CDY41537 | Canola | nucleus | 20.91 | 33.2 |
| CDY29836 | Canola | nucleus | 24.94 | 33.0 |
| CDY64562 | Canola | nucleus | 24.43 | 32.99 |
| CDX95931 | Canola | cytosol | 22.17 | 32.59 |
| CDY40930 | Canola | cytosol | 22.17 | 32.59 |
| CDX84443 | Canola | nucleus | 20.65 | 32.54 |
| CDX89253 | Canola | nucleus | 24.43 | 32.33 |
| CDY40894 | Canola | nucleus | 21.16 | 32.31 |
| CDY24238 | Canola | nucleus | 24.94 | 32.25 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 20.91 | 32.17 |
| CDX82569 | Canola | nucleus | 24.43 | 32.12 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 20.91 | 31.92 |
| CDY29303 | Canola | nucleus | 23.93 | 31.67 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 20.65 | 31.3 |
| CDY07348 | Canola | nucleus | 21.16 | 31.0 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 20.4 | 30.92 |
| CDY51500 | Canola | nucleus | 21.16 | 30.88 |
| CDX90054 | Canola | nucleus | 22.17 | 30.88 |
| CDY60122 | Canola | nucleus | 25.19 | 30.58 |
| CDY21567 | Canola | nucleus | 21.41 | 30.58 |
| CDY31350 | Canola | nucleus | 20.4 | 30.57 |
| CDY26794 | Canola | nucleus | 21.41 | 30.47 |
| CDY47485 | Canola | nucleus | 21.41 | 30.47 |
| CDY47486 | Canola | nucleus | 21.41 | 30.47 |
| CDY15158 | Canola | nucleus | 21.91 | 30.42 |
| CDY02222 | Canola | nucleus | 21.41 | 30.25 |
| CDY39487 | Canola | nucleus | 21.41 | 30.25 |
| CDX69919 | Canola | nucleus | 20.91 | 29.86 |
| CDY50880 | Canola | nucleus | 24.18 | 29.54 |
| CDX75833 | Canola | nucleus | 21.91 | 29.29 |
| CDY69545 | Canola | nucleus | 22.92 | 29.17 |
| CDX81120 | Canola | nucleus | 17.63 | 29.05 |
| CDY21844 | Canola | nucleus | 23.17 | 29.02 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 22.42 | 28.99 |
| CDY53806 | Canola | nucleus | 23.17 | 28.93 |
| CDY20109 | Canola | nucleus | 22.92 | 28.71 |
| CDY31385 | Canola | cytosol | 22.67 | 28.21 |
| CDX98560 | Canola | nucleus | 22.67 | 28.12 |
| CDX97674 | Canola | nucleus | 22.67 | 28.04 |
| CDY39846 | Canola | mitochondrion | 20.4 | 27.55 |
| CDY56427 | Canola | nucleus | 22.67 | 27.52 |
| CDY12886 | Canola | nucleus | 22.17 | 27.41 |
| CDY40970 | Canola | nucleus | 22.17 | 27.33 |
| CDY29983 | Canola | nucleus | 24.18 | 27.04 |
| CDY20131 | Canola | nucleus | 23.43 | 26.57 |
| CDX97675 | Canola | nucleus | 22.92 | 26.53 |
| CDY23551 | Canola | nucleus | 24.69 | 26.13 |
| CDX98562 | Canola | nucleus | 22.42 | 24.79 |
| CDY04129 | Canola | nucleus | 23.43 | 22.79 |
| CDY17437 | Canola | nucleus | 23.17 | 22.66 |
| CDY03050 | Canola | nucleus | 23.43 | 22.46 |
| CDY17595 | Canola | nucleus | 23.43 | 22.3 |
| CDX84050 | Canola | nucleus | 10.83 | 22.28 |
| CDY15835 | Canola | nucleus | 22.67 | 22.11 |
| CDY09368 | Canola | nucleus | 22.42 | 21.92 |
| CDX83510 | Canola | nucleus | 26.2 | 20.39 |
| CDY42810 | Canola | nucleus | 26.2 | 20.39 |
| CDX82429 | Canola | plastid | 0.76 | 2.8 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078EI61 | EnsemblPlants:CDY01755 | ProteinID:CDY01755 | ProteinID:CDY01755.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00112879001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44574 |
| PANTHER:PTHR44574:SF4 | SUPFAM:SSF101941 | UniParc:UPI0004EE27B2 | SEG:seg | : | : |
Description
BnaC06g27950D
Coordinates
chrLK031929:+:64299..66064
Molecular Weight (calculated)
45084.7 Da
IEP (calculated)
7.307
GRAVY (calculated)
-0.625
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDVLLPGFR FHPTDEELVS FYLRRKVEHR PLSIKLITQL DIYKYDPWDL PKFAMTGEKE WYFYCPRDRK YRNSTRPNRV TSVGFWKATG TDRPIYSSDG
101: SKCIGLRKSL VFYKGRAAKG VKTDWMMHEF RLPSASTHNL SDTHLSPNDS WAICRIFRKT NTTVLRAISQ SVSSLPTEAS TDTETYPKPS NIAQMFPEII
201: PQNSAPFTFY KKNMNGTKPC SYYEEKEATN KTSTSTTTSS FSCMDFTSPA SPGPYLDQQY LRSLLLASQE TQPSQLPKFI NNNDISSFLL STPSSNSSFL
301: GGYTNQIGSN IDLTTAILAQ EQCPALVNLS QEYQDIGFEE NNGGANQDHH HKLKFGDVSS TMVGDQHQNQ RHHMLMESYY SSFSTTNDDL PTCFSIT
101: SKCIGLRKSL VFYKGRAAKG VKTDWMMHEF RLPSASTHNL SDTHLSPNDS WAICRIFRKT NTTVLRAISQ SVSSLPTEAS TDTETYPKPS NIAQMFPEII
201: PQNSAPFTFY KKNMNGTKPC SYYEEKEATN KTSTSTTTSS FSCMDFTSPA SPGPYLDQQY LRSLLLASQE TQPSQLPKFI NNNDISSFLL STPSSNSSFL
301: GGYTNQIGSN IDLTTAILAQ EQCPALVNLS QEYQDIGFEE NNGGANQDHH HKLKFGDVSS TMVGDQHQNQ RHHMLMESYY SSFSTTNDDL PTCFSIT
001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
Arabidopsis Description
FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.