Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12886 | Canola | nucleus | 99.38 | 99.69 |
| Bra027101.1-P | Field mustard | nucleus | 98.14 | 99.06 |
| AT1G61110.1 | Thale cress | nucleus | 94.72 | 94.43 |
| CDX82430 | Canola | nucleus | 43.17 | 69.85 |
| CDY22671 | Canola | nucleus | 42.86 | 69.35 |
| CDY26031 | Canola | cytosol | 31.99 | 68.21 |
| CDY26032 | Canola | cytosol | 31.68 | 63.35 |
| CDY69545 | Canola | nucleus | 50.0 | 51.6 |
| CDY56427 | Canola | nucleus | 51.24 | 50.46 |
| CDY53806 | Canola | nucleus | 49.38 | 50.0 |
| CDX82432 | Canola | nucleus | 37.27 | 48.58 |
| CDY20131 | Canola | nucleus | 52.8 | 48.57 |
| CDX97675 | Canola | nucleus | 50.62 | 47.52 |
| CDY41537 | Canola | nucleus | 36.02 | 46.4 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 36.96 | 46.12 |
| CDX98562 | Canola | nucleus | 50.93 | 45.68 |
| CDY40894 | Canola | nucleus | 36.65 | 45.38 |
| CDX84443 | Canola | nucleus | 35.4 | 45.24 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 36.34 | 44.66 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 36.02 | 44.62 |
| CDY07348 | Canola | nucleus | 37.27 | 44.28 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 36.02 | 44.27 |
| CDY51500 | Canola | nucleus | 37.27 | 44.12 |
| CDY31350 | Canola | nucleus | 35.71 | 43.4 |
| CDX95931 | Canola | cytosol | 36.34 | 43.33 |
| CDY40930 | Canola | cytosol | 36.34 | 43.33 |
| CDY21567 | Canola | nucleus | 36.34 | 42.09 |
| CDX69919 | Canola | nucleus | 36.34 | 42.09 |
| CDX81120 | Canola | nucleus | 31.37 | 41.91 |
| CDX90054 | Canola | nucleus | 36.96 | 41.75 |
| TraesCS2D01G214100.1 | Wheat | nucleus | 51.24 | 41.35 |
| CDY15158 | Canola | nucleus | 36.65 | 41.26 |
| CDX75833 | Canola | nucleus | 37.89 | 41.08 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 51.24 | 40.74 |
| CDX92828 | Canola | nucleus | 37.89 | 40.67 |
| CDY29836 | Canola | nucleus | 37.89 | 40.67 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 51.24 | 40.54 |
| TraesCS2B01G228900.1 | Wheat | nucleus | 50.93 | 40.39 |
| CDX89253 | Canola | nucleus | 37.58 | 40.33 |
| TraesCS6D01G096300.1 | Wheat | nucleus | 51.24 | 40.15 |
| CDY42902 | Canola | nucleus | 34.78 | 40.0 |
| HORVU6Hr1G019380.2 | Barley | plastid | 50.62 | 39.76 |
| CDY29303 | Canola | nucleus | 36.96 | 39.67 |
| Zm00001d021818_P002 | Maize | nucleus | 51.55 | 39.62 |
| Os07t0566500-01 | Rice | nucleus | 51.86 | 39.29 |
| OQU90111 | Sorghum | nucleus | 50.93 | 39.23 |
| CDY39846 | Canola | mitochondrion | 35.4 | 38.78 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 50.0 | 38.7 |
| CDY21844 | Canola | nucleus | 37.89 | 38.49 |
| CDX98560 | Canola | nucleus | 38.2 | 38.44 |
| CDX84050 | Canola | nucleus | 22.98 | 38.34 |
| CDY20109 | Canola | nucleus | 37.58 | 38.17 |
| CDX97674 | Canola | nucleus | 37.89 | 38.01 |
| CDY50880 | Canola | nucleus | 37.89 | 37.54 |
| CDY29983 | Canola | nucleus | 38.51 | 34.93 |
| CDY30373 | Canola | nucleus | 27.02 | 31.41 |
| CDY14865 | Canola | nucleus | 27.02 | 31.41 |
| CDY55499 | Canola | nucleus | 26.71 | 30.82 |
| CDY43391 | Canola | nucleus | 27.95 | 30.51 |
| CDY53654 | Canola | nucleus | 26.4 | 30.47 |
| CDY24238 | Canola | nucleus | 28.88 | 30.29 |
| CDY64562 | Canola | nucleus | 27.64 | 30.27 |
| CDX82569 | Canola | nucleus | 27.95 | 29.8 |
| CDY26794 | Canola | nucleus | 25.16 | 29.03 |
| CDY47485 | Canola | nucleus | 25.16 | 29.03 |
| CDY47486 | Canola | nucleus | 25.16 | 29.03 |
| CDY60122 | Canola | nucleus | 28.88 | 28.44 |
| CDY11662 | Canola | nucleus | 28.88 | 27.76 |
| CDY39487 | Canola | nucleus | 24.22 | 27.76 |
| CDY02222 | Canola | nucleus | 24.22 | 27.76 |
| CDX67438 | Canola | nucleus | 28.57 | 27.46 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 24.84 | 26.06 |
| CDY31385 | Canola | cytosol | 24.84 | 25.08 |
| CDY23551 | Canola | nucleus | 28.88 | 24.8 |
| CDY65270 | Canola | nucleus | 28.26 | 23.04 |
| CDY01755 | Canola | nucleus | 27.33 | 22.17 |
| CDY46433 | Canola | nucleus | 28.26 | 22.09 |
| CDX95910 | Canola | nucleus | 27.33 | 21.52 |
| CDY17437 | Canola | nucleus | 26.71 | 21.18 |
| CDY04129 | Canola | nucleus | 26.71 | 21.08 |
| CDY09368 | Canola | nucleus | 26.4 | 20.94 |
| CDY15835 | Canola | nucleus | 26.4 | 20.88 |
| CDY03050 | Canola | nucleus | 26.71 | 20.77 |
| CDY17595 | Canola | nucleus | 26.4 | 20.38 |
| CDX82429 | Canola | plastid | 6.52 | 19.63 |
| CDX83510 | Canola | nucleus | 27.02 | 17.06 |
| CDY42810 | Canola | nucleus | 27.02 | 17.06 |
| CDY54324 | Canola | extracellular | 4.35 | 5.05 |
| CDY16201 | Canola | plastid | 4.04 | 4.94 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078HQU3 | UniProt:A0A078HQU3 | ProteinID:ALL34477.1 | EnsemblPlants:CDY40970 |
| ProteinID:CDY40970 | ProteinID:CDY40970.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00072232001 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| SUPFAM:SSF101941 | UniParc:UPI0004EE8FF1 | SEG:seg | : | : | : |
Description
BnaCnng10130DBnaCnng10130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQU3]
Coordinates
chrLK032486:-:258400..260013
Molecular Weight (calculated)
36165.4 Da
IEP (calculated)
8.737
GRAVY (calculated)
-0.668
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MENMGDSTIG PGHPHLPPGF RFHPTDEELV VHYLKKKAAS IPLPVSIIAE IDLYKFDPWE LPSKASFGEQ EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLNTA AKPPDSTTSR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNNNNNN NEEHFFDGMA VSSDKRSLCG QYRIGHEASG SSSFGSFLSS KRFHHTSDLN NDNYNVSFVS MLSEIPQSSG FHGNGVIDTT
301: STLVDHGVLR QAFQLPNMNW HP
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLNTA AKPPDSTTSR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNNNNNN NEEHFFDGMA VSSDKRSLCG QYRIGHEASG SSSFGSFLSS KRFHHTSDLN NDNYNVSFVS MLSEIPQSSG FHGNGVIDTT
301: STLVDHGVLR QAFQLPNMNW HP
001: MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS
Arabidopsis Description
NAC025NAC transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY42]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.