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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002018.1-P Field mustard cytosol 97.81 97.81
CDX71329 Canola endoplasmic reticulum, extracellular 94.04 97.72
CDY39487 Canola nucleus 73.67 83.63
CDY02222 Canola nucleus 73.35 83.27
CDY26794 Canola nucleus 71.79 82.08
CDY47486 Canola nucleus 71.79 82.08
CDY47485 Canola nucleus 71.47 81.72
AT2G17040.1 Thale cress nucleus 69.91 80.8
VIT_03s0038g03410.t01 Wine grape nucleus 51.41 58.78
KRH24118 Soybean cytosol 52.66 56.57
KRH29090 Soybean nucleus 52.66 55.63
Solyc10g055760.1.1 Tomato cytosol 46.71 52.65
PGSC0003DMT400028190 Potato nucleus 47.02 51.9
GSMUA_Achr11P... Banana nucleus 42.01 51.15
GSMUA_Achr5P19060_001 Banana nucleus 38.56 50.41
GSMUA_Achr1P02710_001 Banana nucleus 42.01 49.26
GSMUA_AchrUn_... Banana nucleus 39.5 48.28
Os03t0133000-01 Rice nucleus 47.34 47.78
Os06t0726300-01 Rice nucleus 41.69 45.55
Zm00001d014843_P001 Maize nucleus 37.93 45.15
Zm00001d048347_P001 Maize nucleus 44.51 44.8
EER92917 Sorghum nucleus 45.77 44.65
GSMUA_Achr3P14720_001 Banana nucleus 40.44 44.64
Zm00001d027530_P001 Maize nucleus 45.14 44.31
GSMUA_Achr7P04030_001 Banana nucleus 39.5 44.21
GSMUA_Achr3P00560_001 Banana nucleus 38.24 43.73
TraesCS7D01G535300.1 Wheat cytosol, nucleus, plastid 40.75 43.62
TraesCS4D01G325700.1 Wheat nucleus 47.02 43.23
TraesCS7A01G549000.1 Wheat cytosol, nucleus, plastid 40.13 43.1
CDY26031 Canola cytosol 20.38 43.05
TraesCS5A01G500500.1 Wheat nucleus 45.45 42.9
TraesCS7B01G472200.1 Wheat cytosol, nucleus, plastid 39.81 42.76
TraesCS7B01G472600.1 Wheat cytosol, nucleus, plastid 40.13 42.67
TraesCS4B01G328800.1 Wheat nucleus 46.08 42.36
TraesCS4B01G329100.1 Wheat nucleus 46.4 42.05
TraesCS5A01G500400.1 Wheat nucleus 45.77 41.95
TraesCS4B01G328600.1 Wheat nucleus 46.08 41.88
HORVU4Hr1G081450.1 Barley nucleus 46.71 41.85
TraesCS4B01G328900.1 Wheat nucleus 45.45 41.19
CDY26032 Canola cytosol 20.69 40.99
TraesCS5A01G500700.1 Wheat nucleus 45.45 40.73
TraesCS4D01G325800.1 Wheat nucleus 45.14 40.68
TraesCS4B01G328700.1 Wheat nucleus 44.83 40.51
Zm00001d036364_P001 Maize nucleus 41.07 40.18
HORVU4Hr1G081430.1 Barley cytosol, nucleus 46.08 39.73
TraesCS5A01G500600.1 Wheat nucleus 45.77 39.57
HORVU4Hr1G081440.3 Barley nucleus 45.77 38.42
CDY22671 Canola nucleus 23.51 37.69
CDX82430 Canola nucleus 23.2 37.19
GSMUA_Achr1P18110_001 Banana cytosol, nucleus, plastid 24.76 36.41
KXG20943 Sorghum nucleus, plastid 41.69 34.46
CDY55499 Canola nucleus 27.59 31.54
CDY30373 Canola nucleus 27.27 31.41
CDY53654 Canola nucleus 27.27 31.18
CDY41537 Canola nucleus 24.14 30.8
CDY14865 Canola nucleus 26.65 30.69
CDX82432 Canola nucleus 23.51 30.36
CDY40732 Canola cytosol, nucleus, plastid 24.45 30.23
CDX84443 Canola nucleus 23.82 30.16
CDY07348 Canola nucleus 25.39 29.89
CDY51500 Canola nucleus 25.39 29.78
CDX78352 Canola cytosol, nucleus, plastid 24.45 29.77
CDY44788 Canola cytosol, nucleus, plastid 24.45 29.77
CDX95931 Canola cytosol 24.76 29.26
CDY40930 Canola cytosol 24.76 29.26
CDY40894 Canola nucleus 23.82 29.23
CDY43391 Canola nucleus 26.96 29.15
CDY64562 Canola nucleus 26.33 28.57
CDY38346 Canola cytosol, nucleus, plastid 23.2 28.46
CDY21567 Canola nucleus 24.76 28.42
CDX92828 Canola nucleus 26.65 28.33
CDY29836 Canola nucleus 26.65 28.33
CDX82569 Canola nucleus 26.65 28.15
CDX69919 Canola nucleus 24.45 28.06
CDY24238 Canola nucleus 26.96 28.01
CDY31350 Canola nucleus 23.2 27.92
CDX90054 Canola nucleus 24.76 27.72
CDX89253 Canola nucleus 26.02 27.67
CDY29303 Canola nucleus 26.02 27.67
CDY42902 Canola nucleus 24.14 27.5
CDX81120 Canola nucleus 20.69 27.39
CDY15158 Canola nucleus 24.45 27.27
CDY60122 Canola nucleus 26.96 26.3
CDX75833 Canola nucleus 24.14 25.93
CDY39846 Canola mitochondrion 23.2 25.17
CDX67438 Canola nucleus 26.33 25.07
CDY11662 Canola nucleus 26.33 25.07
CDY69545 Canola nucleus 24.45 25.0
CDY12886 Canola nucleus 25.08 24.92
CDY21844 Canola nucleus 24.76 24.92
CDY40970 Canola nucleus 25.08 24.84
CDY20109 Canola nucleus 24.45 24.61
CDY65270 Canola nucleus 30.41 24.56
CDY53806 Canola nucleus 24.45 24.53
CDX98560 Canola nucleus 24.45 24.38
CDX97674 Canola nucleus 24.45 24.3
CDY50880 Canola nucleus 24.45 24.0
CDY46433 Canola nucleus 30.72 23.79
CDX84050 Canola nucleus 14.11 23.32
CDY09368 Canola nucleus 29.47 23.15
CDY17437 Canola nucleus 29.47 23.15
CDY15835 Canola nucleus 29.47 23.1
CDX97675 Canola nucleus 24.76 23.03
CDY03050 Canola nucleus 29.78 22.95
CDY04129 Canola nucleus 29.15 22.79
CDY01755 Canola nucleus 28.21 22.67
CDY23551 Canola nucleus 26.65 22.67
CDY56427 Canola nucleus 23.2 22.63
CDY17595 Canola nucleus 29.47 22.54
CDX98562 Canola nucleus 25.08 22.28
CDY20131 Canola nucleus 24.14 22.0
CDY29983 Canola nucleus 24.14 21.69
CDX95910 Canola nucleus 27.59 21.52
CDX83510 Canola nucleus 27.9 17.45
CDY42810 Canola nucleus 27.59 17.25
CDY16201 Canola plastid 6.27 7.6
CDY54324 Canola extracellular 6.58 7.58
CDX82429 Canola plastid 0.94 2.8
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150GO:A0A078GY02UniProt:A0A078GY02EnsemblPlants:CDY31385ProteinID:CDY31385
ProteinID:CDY31385.1ncoils:CoilGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00047591001
InterPro:IPR003441InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sfPFAM:PF02365PFscan:PS51005
PANTHER:PTHR31989PANTHER:PTHR31989:SF2SUPFAM:SSF101941UniParc:UPI0004EDFEF7::
Description
BnaA07g03200DBnaA07g03200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GY02]
Coordinates
chrLK032271:-:147923..149309
Molecular Weight (calculated)
36685.5 Da
IEP (calculated)
9.679
GRAVY (calculated)
-0.503
Length
319 amino acids
Sequence
(BLAST)
001: MALHLSFDLV CSLKTVPHHT THWVQVLYIG TVRDMSKEIQ LPGFRFHPTE EELLDFYLKN IVYGKRCKVE VIGFLNIYGH DPWDLPRLST IGEREWYFFV
101: PRERKHGDGG RPSRITEKGY WKATGSDRKI ISSSEPKRMI GLKKTLVFYT GRAPGGTKTD WVMNEFRMPD NLTLPKSVVL CKIYRKATSL KVLEQRAEME
201: AKMNQTRPSS PLSSSGTNCL AGKEEDVMMT SFPFPQAEAM KQPNHILMFQ EHNENAKNKE KQREAERKQP SSSLKLPSGV LPIPELQLPK QGFELGQDQF
301: LSISPWLQNL TPIINLLYF
Best Arabidopsis Sequence Match ( AT2G02450.1 )
(BLAST)
001: MAIVSSTTSI IPMSNQVNNN EKGIEDNDHR GGQESHVQNE DEADDHDHDM VMPGFRFHPT EEELIEFYLR RKVEGKRFNV ELITFLDLYR YDPWELPAMA
101: AIGEKEWYFY VPRDRKYRNG DRPNRVTTSG YWKATGADRM IRSETSRPIG LKKTLVFYSG KAPKGTRTSW IMNEYRLPHH ETEKYQKAEI SLCRVYKRPG
201: VEDHPSVPRS LSTRHHNHNS STSSRLALRQ QQHHSSSSNH SDNNLNNNNN INNLEKLSTE YSGDGSTTTT TTNSNSDVTI ALANQNIYRP MPYDTSNNTL
301: IVSTRNHQDD DETAIVDDLQ RLVNYQISDG ATTLMPQTQA ALAMNMIPAG TIPNNALWDM WNPIVPDGNR DHYTNIPFK
Arabidopsis Description
NAC035NAC domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVP8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.