Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016294.1-P | Field mustard | nucleus | 91.65 | 87.86 |
| CDY46433 | Canola | nucleus | 91.39 | 87.62 |
| AT1G26870.1 | Thale cress | nucleus | 84.81 | 80.14 |
| Os02t0745250-00 | Rice | nucleus | 33.16 | 70.05 |
| HORVU6Hr1G075830.1 | Barley | nucleus | 41.01 | 62.07 |
| CDY01755 | Canola | nucleus | 59.75 | 59.45 |
| CDX95910 | Canola | nucleus | 60.76 | 58.68 |
| CDY26031 | Canola | cytosol | 21.01 | 54.97 |
| CDY26032 | Canola | cytosol | 21.27 | 52.17 |
| CDY16201 | Canola | plastid | 32.91 | 49.43 |
| CDY54324 | Canola | extracellular | 33.16 | 47.29 |
| EES07261 | Sorghum | nucleus | 46.33 | 47.16 |
| TraesCS6B01G335700.1 | Wheat | nucleus | 45.57 | 46.27 |
| TraesCS6D01G286300.1 | Wheat | nucleus | 45.57 | 46.15 |
| TraesCS6A01G307200.1 | Wheat | nucleus | 45.06 | 45.76 |
| CDX82430 | Canola | nucleus | 23.04 | 45.73 |
| TraesCS2B01G076000.1 | Wheat | nucleus | 38.73 | 45.54 |
| CDY22671 | Canola | nucleus | 22.78 | 45.23 |
| TraesCS2B01G076100.1 | Wheat | nucleus | 39.75 | 44.6 |
| TraesCS2D01G061600.1 | Wheat | nucleus | 40.51 | 44.44 |
| HORVU2Hr1G011360.1 | Barley | nucleus | 40.51 | 44.2 |
| HORVU2Hr1G011390.1 | Barley | nucleus | 40.51 | 44.2 |
| CDY11662 | Canola | nucleus | 36.96 | 43.58 |
| CDX67438 | Canola | nucleus | 36.71 | 43.28 |
| EES13897 | Sorghum | nucleus | 41.77 | 42.97 |
| TraesCS2A01G063300.1 | Wheat | nucleus | 40.76 | 42.26 |
| TraesCS5B01G338400.1 | Wheat | nucleus | 40.76 | 42.26 |
| TraesCS5A01G339600.1 | Wheat | nucleus | 40.51 | 41.99 |
| Zm00001d050410_P001 | Maize | nucleus | 40.51 | 41.99 |
| TraesCS2D01G061500.1 | Wheat | nucleus | 41.01 | 41.86 |
| TraesCS5B01G338700.1 | Wheat | nucleus | 40.25 | 41.73 |
| TraesCS5D01G344100.1 | Wheat | nucleus | 40.25 | 41.73 |
| HORVU2Hr1G011370.1 | Barley | nucleus | 40.76 | 41.6 |
| Os08t0436700-01 | Rice | nucleus | 40.51 | 41.56 |
| TraesCS2A01G063200.1 | Wheat | nucleus | 40.51 | 41.34 |
| TraesCS2B01G075900.1 | Wheat | nucleus | 40.51 | 41.34 |
| Zm00001d032182_P001 | Maize | nucleus | 41.01 | 41.33 |
| TraesCS5D01G472600.1 | Wheat | nucleus | 39.49 | 40.94 |
| TraesCS2A01G063400.1 | Wheat | nucleus | 28.86 | 40.57 |
| OQU89481 | Sorghum | nucleus | 41.27 | 40.45 |
| GSMUA_Achr10P... | Banana | cytosol | 42.03 | 39.34 |
| CDY55499 | Canola | nucleus | 27.59 | 39.07 |
| CDY30373 | Canola | nucleus | 27.34 | 38.99 |
| CDY53654 | Canola | nucleus | 27.09 | 38.35 |
| Zm00001d020446_P001 | Maize | nucleus | 38.23 | 38.32 |
| CDY14865 | Canola | nucleus | 26.84 | 38.27 |
| CDX82432 | Canola | nucleus | 23.04 | 36.84 |
| Zm00001d018038_P001 | Maize | nucleus | 45.32 | 36.31 |
| CDY43391 | Canola | nucleus | 26.58 | 35.59 |
| CDY24238 | Canola | nucleus | 27.59 | 35.5 |
| CDY64562 | Canola | nucleus | 26.08 | 35.03 |
| CDX92828 | Canola | nucleus | 26.58 | 35.0 |
| CDY29836 | Canola | nucleus | 26.33 | 34.67 |
| CDX82569 | Canola | nucleus | 26.33 | 34.44 |
| CDX89253 | Canola | nucleus | 26.08 | 34.33 |
| CDY42902 | Canola | nucleus | 24.3 | 34.29 |
| CDY40894 | Canola | nucleus | 22.53 | 34.23 |
| CDY29303 | Canola | nucleus | 25.82 | 34.0 |
| CDY41537 | Canola | nucleus | 21.27 | 33.6 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 22.03 | 33.46 |
| CDY60122 | Canola | nucleus | 27.59 | 33.33 |
| CDY02222 | Canola | nucleus | 23.54 | 33.1 |
| CDY39487 | Canola | nucleus | 23.54 | 33.1 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 21.52 | 32.95 |
| CDX84443 | Canola | nucleus | 21.01 | 32.94 |
| CDY26794 | Canola | nucleus | 23.04 | 32.62 |
| CDY47485 | Canola | nucleus | 23.04 | 32.62 |
| CDY47486 | Canola | nucleus | 23.04 | 32.62 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 21.52 | 32.44 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 21.52 | 32.44 |
| CDX95931 | Canola | cytosol | 22.03 | 32.22 |
| CDY40930 | Canola | cytosol | 22.03 | 32.22 |
| CDX75833 | Canola | nucleus | 24.05 | 31.99 |
| CDY31350 | Canola | nucleus | 21.27 | 31.7 |
| CDX90054 | Canola | nucleus | 22.78 | 31.58 |
| CDY21567 | Canola | nucleus | 22.03 | 31.3 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 24.3 | 31.27 |
| CDY21844 | Canola | nucleus | 25.06 | 31.23 |
| CDY15158 | Canola | nucleus | 22.53 | 31.12 |
| CDX69919 | Canola | nucleus | 21.77 | 30.94 |
| CDY20109 | Canola | nucleus | 24.81 | 30.91 |
| CDY69545 | Canola | nucleus | 24.3 | 30.77 |
| CDY07348 | Canola | nucleus | 21.01 | 30.63 |
| CDX98560 | Canola | nucleus | 24.81 | 30.62 |
| CDX97674 | Canola | nucleus | 24.81 | 30.53 |
| CDY51500 | Canola | nucleus | 21.01 | 30.51 |
| CDY31385 | Canola | cytosol | 24.56 | 30.41 |
| CDY53806 | Canola | nucleus | 24.3 | 30.19 |
| CDX81120 | Canola | nucleus | 18.23 | 29.88 |
| CDY50880 | Canola | nucleus | 24.56 | 29.85 |
| CDY56427 | Canola | nucleus | 24.3 | 29.36 |
| CDY23551 | Canola | nucleus | 27.09 | 28.53 |
| CDY12886 | Canola | nucleus | 23.04 | 28.35 |
| CDY40970 | Canola | nucleus | 23.04 | 28.26 |
| CDY39846 | Canola | mitochondrion | 21.01 | 28.23 |
| CDY29983 | Canola | nucleus | 25.06 | 27.89 |
| CDX97675 | Canola | nucleus | 24.05 | 27.7 |
| CDY20131 | Canola | nucleus | 24.3 | 27.43 |
| CDX98562 | Canola | nucleus | 23.29 | 25.63 |
| CDX84050 | Canola | nucleus | 12.15 | 24.87 |
| CDY04129 | Canola | nucleus | 24.05 | 23.28 |
| CDY17437 | Canola | nucleus | 23.8 | 23.15 |
| CDY03050 | Canola | nucleus | 24.05 | 22.95 |
| CDY17595 | Canola | nucleus | 24.05 | 22.78 |
| CDY15835 | Canola | nucleus | 23.29 | 22.6 |
| CDY09368 | Canola | nucleus | 23.04 | 22.41 |
| CDX83510 | Canola | nucleus | 27.34 | 21.18 |
| CDY42810 | Canola | nucleus | 27.34 | 21.18 |
| CDX82429 | Canola | plastid | 0.25 | 0.93 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078JFQ0 | UniProt:A0A078JFQ0 | EnsemblPlants:CDY65270 | ProteinID:CDY65270 |
| ProteinID:CDY65270.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00045496001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44574 |
| PANTHER:PTHR44574:SF4 | SUPFAM:SSF101941 | UniParc:UPI0004EBA57A | SEG:seg | : | : |
Description
BnaCnng46350DBnaCnng46350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFQ0]
Coordinates
chrLK034710:+:4606..6584
Molecular Weight (calculated)
44941.6 Da
IEP (calculated)
6.569
GRAVY (calculated)
-0.628
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MEERNNDGDQ KMEEVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFATGEKE WYFYCPRDRK YRNSSRPNRV TGAGFWKATG
101: TDRPIYSSEG NKCIGLKKSL VFYKGRAAKG VKTDWMMHEF RMPSLSVPSP STKRFFDSPV SPNDSWAICR IFKKTNTTTL RAMPHSFVSS LPSETSIDTM
201: SSDQKLSNTS HFSSDKILKT SSHFQFHHEN MSSTPKTSTS PTSHVATINP FSYLDFTSYE ETTNVFNPVS CLDHQHLTNL FLATQETQPQ FPRLASPNES
301: PSFLVNMSSS DCALLGECTS QIDLSVMLAQ EQCPALVSLP QEYQEKGLEG NGEIKNLGGC NEDYHYQDVK HNMTLLESYY SSLSNGELAN CFSTT
101: TDRPIYSSEG NKCIGLKKSL VFYKGRAAKG VKTDWMMHEF RMPSLSVPSP STKRFFDSPV SPNDSWAICR IFKKTNTTTL RAMPHSFVSS LPSETSIDTM
201: SSDQKLSNTS HFSSDKILKT SSHFQFHHEN MSSTPKTSTS PTSHVATINP FSYLDFTSYE ETTNVFNPVS CLDHQHLTNL FLATQETQPQ FPRLASPNES
301: PSFLVNMSSS DCALLGECTS QIDLSVMLAQ EQCPALVSLP QEYQEKGLEG NGEIKNLGGC NEDYHYQDVK HNMTLLESYY SSLSNGELAN CFSTT
001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
Arabidopsis Description
FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.