Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G472600.1 | Wheat | nucleus | 97.9 | 97.9 |
| TraesCS5B01G338400.1 | Wheat | nucleus | 95.01 | 95.01 |
| TraesCS5A01G339600.1 | Wheat | nucleus | 94.49 | 94.49 |
| TraesCS2D01G061500.1 | Wheat | nucleus | 81.36 | 80.1 |
| TraesCS2D01G061600.1 | Wheat | nucleus | 73.75 | 78.06 |
| Os08t0436700-01 | Rice | nucleus | 73.23 | 72.47 |
| EES13897 | Sorghum | nucleus | 70.34 | 69.79 |
| Zm00001d050410_P001 | Maize | nucleus | 66.4 | 66.4 |
| Zm00001d032182_P001 | Maize | nucleus | 67.72 | 65.82 |
| TraesCS5D01G239600.1 | Wheat | nucleus | 63.25 | 61.17 |
| TraesCS6D01G286300.1 | Wheat | nucleus | 48.82 | 47.69 |
| CDY65270 | Canola | nucleus | 41.73 | 40.25 |
| Bra024677.1-P | Field mustard | nucleus | 43.04 | 39.42 |
| Bra016294.1-P | Field mustard | nucleus | 42.52 | 39.32 |
| AT1G26870.1 | Thale cress | nucleus | 43.04 | 39.23 |
| CDY46433 | Canola | nucleus | 42.26 | 39.08 |
| GSMUA_Achr10P... | Banana | cytosol | 43.04 | 38.86 |
| CDY01755 | Canola | nucleus | 37.27 | 35.77 |
| Bra004403.1-P | Field mustard | nucleus | 37.27 | 35.06 |
| CDX95910 | Canola | nucleus | 37.27 | 34.72 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 30.45 | 34.02 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 31.5 | 32.97 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 30.18 | 29.95 |
| TraesCS7D01G535300.1 | Wheat | cytosol, nucleus, plastid | 23.36 | 29.87 |
| TraesCS4D01G325700.1 | Wheat | nucleus | 25.46 | 27.95 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 21.78 | 27.76 |
| TraesCS4D01G175700.1 | Wheat | nucleus | 25.72 | 27.45 |
| TraesCS3D01G333100.1 | Wheat | nucleus | 22.57 | 27.22 |
| TraesCS4D01G325800.1 | Wheat | nucleus | 25.2 | 27.12 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 21.26 | 27.0 |
| TraesCS3D01G170000.1 | Wheat | nucleus | 21.78 | 26.95 |
| TraesCS7D01G315100.1 | Wheat | nucleus | 25.98 | 25.38 |
| TraesCS2D01G101400.1 | Wheat | nucleus | 23.62 | 25.35 |
| TraesCS4D01G094400.1 | Wheat | nucleus | 22.05 | 25.07 |
| TraesCS5D01G481200.1 | Wheat | nucleus | 21.26 | 24.92 |
| TraesCS1D01G261800.1 | Wheat | nucleus | 24.93 | 24.42 |
| TraesCS3D01G078900.1 | Wheat | nucleus | 22.57 | 24.36 |
| TraesCS3D01G398200.1 | Wheat | nucleus | 25.98 | 24.15 |
| TraesCS5D01G148800.1 | Wheat | nucleus | 22.31 | 24.01 |
| TraesCS2D01G214100.1 | Wheat | nucleus | 24.67 | 23.56 |
| TraesCS6D01G059300.1 | Wheat | nucleus, plastid | 21.26 | 22.95 |
| TraesCS6D01G096300.1 | Wheat | nucleus | 24.67 | 22.87 |
| TraesCS2D01G101300.1 | Wheat | nucleus | 18.37 | 22.22 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR44574 | PANTHER:PTHR44574:SF3 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS5D01G344100 | EnsemblPlants:TraesCS5D01G344100.1 | SEG:seg |
Description
No Description!
Coordinates
chr5D:+:431780999..431782568
Molecular Weight (calculated)
43081.8 Da
IEP (calculated)
6.861
GRAVY (calculated)
-0.639
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGINDVNMD KSDEIIMPGF RFHPTDEELV SFYLKKKIQQ KPISIELIRQ LDIYKFDPWD LPKLASTGET DWYFYCPRDR KYRNSARPNR VTAAGFWKAT
101: GTDRPIYSSE GTRCIGLKKS LVFYRGRAAR GIKTDWMMHE FRLPSLTNPS LPKRPIDKNI PLNDSWTICK IFKKTSSMAQ QMALSHTWGP PLPETTEQDL
201: FSAMQPMQAS NFASQSSFCS SQVAEAPASQ FNSKHGFQGQ QQLQKPSNTQ DGSSCKVISF NCNPSLELEG PTILPFQTHP SQKPEHTAPP LFNMQFGQPE
301: QQITGFLVDS SADINVGMSS RNQDSSTMKH GNTFSMNNEL DAPGRLNFPF DLGADSSDDW KCNIPWESFL SPTVPAEMPQ Y
101: GTDRPIYSSE GTRCIGLKKS LVFYRGRAAR GIKTDWMMHE FRLPSLTNPS LPKRPIDKNI PLNDSWTICK IFKKTSSMAQ QMALSHTWGP PLPETTEQDL
201: FSAMQPMQAS NFASQSSFCS SQVAEAPASQ FNSKHGFQGQ QQLQKPSNTQ DGSSCKVISF NCNPSLELEG PTILPFQTHP SQKPEHTAPP LFNMQFGQPE
301: QQITGFLVDS SADINVGMSS RNQDSSTMKH GNTFSMNNEL DAPGRLNFPF DLGADSSDDW KCNIPWESFL SPTVPAEMPQ Y
001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
Arabidopsis Description
FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.