Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G142100.1 | Wheat | nucleus | 98.59 | 98.59 |
| TraesCS5A01G143200.1 | Wheat | nucleus | 98.31 | 96.94 |
| HORVU5Hr1G045650.7 | Barley | plastid | 95.2 | 82.4 |
| Os11t0126900-01 | Rice | nucleus | 37.29 | 77.19 |
| Os12t0123700-01 | Rice | nucleus | 63.56 | 57.25 |
| EES07907 | Sorghum | plastid | 57.63 | 50.75 |
| EES16571 | Sorghum | nucleus | 57.63 | 47.55 |
| Zm00001d023294_P001 | Maize | nucleus | 55.37 | 41.26 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 31.92 | 37.79 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 31.92 | 37.67 |
| TraesCS2D01G101400.1 | Wheat | nucleus | 37.29 | 37.18 |
| TraesCS4D01G175700.1 | Wheat | nucleus | 37.29 | 36.97 |
| TraesCS3D01G170000.1 | Wheat | nucleus | 31.92 | 36.69 |
| TraesCS3D01G078900.1 | Wheat | nucleus | 36.44 | 36.54 |
| TraesCS3D01G333100.1 | Wheat | nucleus | 31.92 | 35.76 |
| TraesCS5D01G481200.1 | Wheat | nucleus | 31.92 | 34.77 |
| TraesCS2D01G214100.1 | Wheat | nucleus | 37.85 | 33.58 |
| TraesCS6D01G096300.1 | Wheat | nucleus | 38.14 | 32.85 |
| TraesCS4D01G094400.1 | Wheat | nucleus | 31.07 | 32.84 |
| TraesCS2D01G101300.1 | Wheat | nucleus | 29.1 | 32.7 |
| TraesCS6D01G059300.1 | Wheat | nucleus, plastid | 29.94 | 30.03 |
| TraesCS7D01G535300.1 | Wheat | cytosol, nucleus, plastid | 20.9 | 24.83 |
| TraesCS4D01G325700.1 | Wheat | nucleus | 24.01 | 24.5 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 23.45 | 24.34 |
| TraesCS4D01G325800.1 | Wheat | nucleus | 23.73 | 23.73 |
| TraesCS5D01G239600.1 | Wheat | nucleus | 25.71 | 23.1 |
| TraesCS2D01G061600.1 | Wheat | nucleus | 23.45 | 23.06 |
| TraesCS6D01G286300.1 | Wheat | nucleus | 25.14 | 22.82 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 23.45 | 22.8 |
| TraesCS5D01G344100.1 | Wheat | nucleus | 24.01 | 22.31 |
| TraesCS1D01G261800.1 | Wheat | nucleus | 24.29 | 22.11 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 23.73 | 21.88 |
| TraesCS5D01G472600.1 | Wheat | nucleus | 23.16 | 21.52 |
| TraesCS2D01G061500.1 | Wheat | nucleus | 23.16 | 21.19 |
| TraesCS7D01G315100.1 | Wheat | nucleus | 22.6 | 20.51 |
| TraesCS3D01G398200.1 | Wheat | nucleus | 23.45 | 20.24 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G148800.1 | EnsemblPlantsGene:TraesCS5D01G148800 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR45430 |
| PFAM:PF02365 | PFscan:PS51005 | SEG:seg | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr5D:+:238066006..238067743
Molecular Weight (calculated)
39474.2 Da
IEP (calculated)
6.435
GRAVY (calculated)
-0.683
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMGSSAAMP ALPPGFRFHP TDEELIVHYL GRQAASMPSP VPIIAEVNIY KCNPWDLPGK ALFGENEWYF FSPRDRKYPN GARPNRAAGS GYWKATGTDK
101: AILSTPANES IGVKKALVFY RGKPPKGVKT DWIMHEYRLT AADNRTTKRR GSSMRLDDWV LCRIHKKCGN LPNFSSSDQE QEHEQESSTV EDSQNNHTVS
201: SPKSEAFDGD GDDQLQLQQF RPMAIAKSCS LTDLLNTVDY AALSHLLLDG AGASSSDAGA DYQLPPENPL IYSQPPWQQT LHYNNNNGYV NNDTIDVPQL
301: PEAHVDDYGM NGDRYNGMKR KRSSGSLYCS QLQLPADQYS GMLIHPFLSQ QLHM
101: AILSTPANES IGVKKALVFY RGKPPKGVKT DWIMHEYRLT AADNRTTKRR GSSMRLDDWV LCRIHKKCGN LPNFSSSDQE QEHEQESSTV EDSQNNHTVS
201: SPKSEAFDGD GDDQLQLQQF RPMAIAKSCS LTDLLNTVDY AALSHLLLDG AGASSSDAGA DYQLPPENPL IYSQPPWQQT LHYNNNNGYV NNDTIDVPQL
301: PEAHVDDYGM NGDRYNGMKR KRSSGSLYCS QLQLPADQYS GMLIHPFLSQ QLHM
001: MISKDPRSSL PPGFRFHPTD EELILHYLRK KVSSSPVPLS IIADVDIYKS DPWDLPAKAP FGEKEWYFFS PRDRKYPNGA RPNRAAASGY WKATGTDKLI
101: AVPNGEGFHE NIGIKKALVF YRGKPPKGVK TNWIMHEYRL ADSLSPKRIN SSRSGGSELD DWVLCRIYKK SHASLSSPDV ALVTSNQEHE ENDNEPFVDR
201: GTFLPNLQND QPLKRQKSSC SFSNLLDATD LTFLANFLNE TPENRSESDF SFMIGNFSNP DIYGNHYLDQ KLPQLSSPTS ETSGIGSKRE RVDFAEETIN
301: ASKKMMNTYS YNNSIDQMDH SMMQQPSFLN QELMMSSHLQ YQG
101: AVPNGEGFHE NIGIKKALVF YRGKPPKGVK TNWIMHEYRL ADSLSPKRIN SSRSGGSELD DWVLCRIYKK SHASLSSPDV ALVTSNQEHE ENDNEPFVDR
201: GTFLPNLQND QPLKRQKSSC SFSNLLDATD LTFLANFLNE TPENRSESDF SFMIGNFSNP DIYGNHYLDQ KLPQLSSPTS ETSGIGSKRE RVDFAEETIN
301: ASKKMMNTYS YNNSIDQMDH SMMQQPSFLN QELMMSSHLQ YQG
Arabidopsis Description
NAC047NAC transcription factor 47 [Source:UniProtKB/Swiss-Prot;Acc:Q84TD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.