Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G421100.1 | Wheat | nucleus | 82.03 | 92.38 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 80.21 | 89.8 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 79.69 | 87.18 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 75.52 | 79.67 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 47.66 | 63.32 |
| Os03t0777000-01 | Rice | nucleus | 59.38 | 62.98 |
| Zm00001d007850_P001 | Maize | nucleus | 38.02 | 58.17 |
| EER95852 | Sorghum | nucleus | 49.48 | 55.39 |
| Zm00001d018773_P001 | Maize | nucleus | 48.18 | 51.68 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 36.72 | 50.9 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 34.38 | 50.38 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 39.06 | 50.34 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 27.86 | 50.0 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 39.84 | 49.84 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 35.68 | 49.64 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 32.03 | 49.2 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 34.9 | 47.18 |
| AT2G43000.1 | Thale cress | nucleus | 33.59 | 46.91 |
| PGSC0003DMT400090327 | Potato | cytosol | 34.64 | 46.83 |
| Bra000282.1-P | Field mustard | nucleus | 33.07 | 46.69 |
| KRH73618 | Soybean | cytosol | 38.8 | 46.56 |
| KRH14512 | Soybean | nucleus | 39.06 | 46.01 |
| Solyc05g021090.2.1 | Tomato | nucleus | 33.33 | 45.88 |
| PGSC0003DMT400054407 | Potato | nucleus | 37.5 | 45.86 |
| CDY53654 | Canola | nucleus | 33.07 | 45.52 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 34.9 | 45.42 |
| CDX82569 | Canola | nucleus | 35.68 | 45.36 |
| CDY64562 | Canola | nucleus | 34.64 | 45.24 |
| CDY55499 | Canola | nucleus | 32.81 | 45.16 |
| Solyc02g069960.2.1 | Tomato | nucleus | 36.46 | 45.16 |
| CDY30373 | Canola | nucleus | 32.55 | 45.13 |
| Bra037743.1-P | Field mustard | nucleus | 32.55 | 45.13 |
| PGSC0003DMT400003082 | Potato | nucleus | 33.07 | 45.04 |
| Bra004736.1-P | Field mustard | nucleus | 32.81 | 45.0 |
| CDY43391 | Canola | nucleus | 34.38 | 44.75 |
| CDY24238 | Canola | nucleus | 35.68 | 44.63 |
| KRH46012 | Soybean | nucleus | 35.16 | 44.41 |
| KRG98971 | Soybean | nucleus | 35.16 | 44.41 |
| KRH13702 | Soybean | nucleus | 36.72 | 44.34 |
| Bra039353.1-P | Field mustard | nucleus | 35.42 | 44.3 |
| AT3G12910.1 | Thale cress | nucleus | 34.9 | 44.22 |
| CDY14865 | Canola | nucleus | 31.77 | 44.04 |
| Solyc07g045030.2.1 | Tomato | nucleus | 36.98 | 42.9 |
| CDY60122 | Canola | nucleus | 36.46 | 42.81 |
| Bra034719.1-P | Field mustard | nucleus | 36.2 | 42.51 |
| PGSC0003DMT400049124 | Potato | nucleus | 27.08 | 41.6 |
| CDY23551 | Canola | nucleus | 36.2 | 37.07 |
| TraesCS6D01G286300.1 | Wheat | nucleus | 30.99 | 30.51 |
| TraesCS2D01G061600.1 | Wheat | nucleus | 28.39 | 30.28 |
| TraesCS5D01G472600.1 | Wheat | nucleus | 29.95 | 30.18 |
| TraesCS5D01G344100.1 | Wheat | nucleus | 29.95 | 30.18 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 22.92 | 29.43 |
| TraesCS7D01G535300.1 | Wheat | cytosol, nucleus, plastid | 22.66 | 29.19 |
| TraesCS5D01G239600.1 | Wheat | nucleus | 29.95 | 29.19 |
| TraesCS2D01G061500.1 | Wheat | nucleus | 28.91 | 28.68 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 20.83 | 26.67 |
| TraesCS4D01G325700.1 | Wheat | nucleus | 23.96 | 26.51 |
| TraesCS5D01G481200.1 | Wheat | nucleus | 22.4 | 26.46 |
| TraesCS3D01G333100.1 | Wheat | nucleus | 21.61 | 26.27 |
| TraesCS4D01G175700.1 | Wheat | nucleus | 23.96 | 25.77 |
| TraesCS3D01G170000.1 | Wheat | nucleus | 20.31 | 25.32 |
| TraesCS4D01G325800.1 | Wheat | nucleus | 23.18 | 25.14 |
| CDY42810 | Canola | nucleus | 33.07 | 24.9 |
| TraesCS2D01G101400.1 | Wheat | nucleus | 22.92 | 24.79 |
| CDX83510 | Canola | nucleus | 32.81 | 24.71 |
| TraesCS3D01G078900.1 | Wheat | nucleus | 22.4 | 24.36 |
| TraesCS4D01G094400.1 | Wheat | nucleus | 21.09 | 24.18 |
| TraesCS6D01G059300.1 | Wheat | nucleus, plastid | 22.14 | 24.08 |
| TraesCS5D01G148800.1 | Wheat | nucleus | 21.88 | 23.73 |
| TraesCS1D01G261800.1 | Wheat | nucleus | 23.96 | 23.65 |
| TraesCS7D01G315100.1 | Wheat | nucleus | 22.92 | 22.56 |
| TraesCS3D01G398200.1 | Wheat | nucleus | 23.18 | 21.71 |
| TraesCS2D01G214100.1 | Wheat | nucleus | 22.14 | 21.3 |
| TraesCS6D01G096300.1 | Wheat | nucleus | 22.66 | 21.17 |
| TraesCS2D01G101300.1 | Wheat | nucleus | 17.19 | 20.95 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR44543 | PANTHER:PTHR44543:SF3 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS5D01G421000 | EnsemblPlants:TraesCS5D01G421000.1 | SEG:seg |
Description
No Description!
Coordinates
chr5D:+:481302842..481304217
Molecular Weight (calculated)
43145.4 Da
IEP (calculated)
6.586
GRAVY (calculated)
-0.634
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAKAKMSAM ELEMEKATRD GELVLGGAGD EEEEEDVVLP GYRFHPTDEE LVAFYLRRKM ARKSLRIEVI REMDIYKHDP WDLPSKLHLS MHHSSCNFFS
101: GTKTFYLTEC NRPLANYAEA STVGGEKEWY FFCLRGRKYR NSIRPNRVTG SGFWKATGID RPIYSAGSGG ASSGVSIGLK KSLVYYRGSA GKGTKTDWMM
201: HEFRLPPAAA NASPSMQEAE VWTICRIFRR AITYRNQQQP WRPAPAPSFA DSNSNTGSFE SSEAGDEYMN CLQAPAPAAP CIPHPQHQQQ YVSRTGTVDS
301: GNFFYEDNMH NQQFQGQWNA APAAPVPEQK QQNPLSTAVD FHQNDNSHAV AANDFYKVEG YLGEIARMLE VADPAGFYDY RSYG
101: GTKTFYLTEC NRPLANYAEA STVGGEKEWY FFCLRGRKYR NSIRPNRVTG SGFWKATGID RPIYSAGSGG ASSGVSIGLK KSLVYYRGSA GKGTKTDWMM
201: HEFRLPPAAA NASPSMQEAE VWTICRIFRR AITYRNQQQP WRPAPAPSFA DSNSNTGSFE SSEAGDEYMN CLQAPAPAAP CIPHPQHQQQ YVSRTGTVDS
301: GNFFYEDNMH NQQFQGQWNA APAAPVPEQK QQNPLSTAVD FHQNDNSHAV AANDFYKVEG YLGEIARMLE VADPAGFYDY RSYG
001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
Arabidopsis Description
FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.