Factsheet for Bra034719.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60122	Canola	nucleus	99.08	99.08
Bra039353.1-P	Field mustard	nucleus	79.51	84.69
AT3G12910.1	Thale cress	nucleus	71.25	76.9
Bra000282.1-P	Field mustard	nucleus	40.98	49.26
GSMUA_Achr10P...	Banana	cytosol	39.14	47.94
Zm00001d007850_P001	Maize	nucleus	36.7	47.81
GSMUA_Achr7P00860_001	Banana	nucleus	38.23	47.71
Bra037743.1-P	Field mustard	nucleus	40.37	47.65
KRH46012	Soybean	nucleus	43.43	46.71
KRG98971	Soybean	nucleus	43.12	46.38
Bra004736.1-P	Field mustard	nucleus	39.14	45.71
GSMUA_Achr4P32010_001	Banana	nucleus	40.06	45.64
GSMUA_Achr9P10040_001	Banana	nucleus	41.9	45.07
GSMUA_Achr4P23030_001	Banana	nucleus	33.95	44.4
GSMUA_Achr5P02170_001	Banana	nucleus	40.37	43.0
HORVU5Hr1G099470.2	Barley	cytosol	42.81	41.54
TraesCS5B01G415600.1	Wheat	nucleus	43.43	40.46
TraesCS5D01G421100.1	Wheat	nucleus	41.9	40.18
Zm00001d031164_P001	Maize	nucleus	37.31	39.87
Zm00001d013151_P001	Maize	cytosol	40.67	39.58
TraesCS5B01G415700.1	Wheat	nucleus	42.2	39.43
TraesCS4B01G384700.1	Wheat	cytoskeleton, cytosol, nucleus	40.98	39.41
TraesCS5A01G411900.1	Wheat	nucleus	41.28	39.36
HORVU5Hr1G099460.1	Barley	nucleus	41.59	39.31
EES17466	Sorghum	nucleus	36.39	39.14
EER95852	Sorghum	nucleus	40.98	39.07
TraesCS5A01G411800.1	Wheat	nucleus	41.9	38.92
HORVU5Hr1G099390.2	Barley	nucleus	34.25	38.75
Zm00001d018773_P001	Maize	nucleus	41.59	37.99
Os03t0777000-01	Rice	nucleus	41.9	37.85
EER93360	Sorghum	nucleus	42.51	37.57
TraesCS5D01G420800.1	Wheat	nucleus	41.28	37.09
TraesCS5D01G421000.1	Wheat	nucleus	42.51	36.2
TraesCS5A01G411700.1	Wheat	nucleus	41.28	35.81
TraesCS5B01G415400.1	Wheat	nucleus	41.28	35.81
Zm00001d034277_P001	Maize	cytosol, mitochondrion, nucleus	39.76	35.33
Bra028441.1-P	Field mustard	nucleus	33.33	32.54
Bra038663.1-P	Field mustard	nucleus	24.77	32.4
Bra037283.1-P	Field mustard	nucleus	26.61	31.18
Bra033239.1-P	Field mustard	nucleus	26.91	30.88
Bra013034.1-P	Field mustard	nucleus	26.3	30.61
Bra029201.1-P	Field mustard	cytosol	24.77	30.57
Bra008309.1-P	Field mustard	cytosol, nucleus, plastid	24.16	30.38
Bra028645.1-P	Field mustard	nucleus	25.69	30.22
Bra009370.1-P	Field mustard	nucleus	25.69	30.22
Bra004385.1-P	Field mustard	cytosol	24.77	30.0
Bra006015.1-P	Field mustard	cytosol, nucleus, plastid	25.69	30.0
Bra026353.1-P	Field mustard	nucleus	26.91	29.33
Bra027101.1-P	Field mustard	nucleus	27.83	28.53
Bra019052.1-P	Field mustard	nucleus	25.99	28.33
Bra001596.1-P	Field mustard	nucleus	25.38	28.14
Bra003998.1-P	Field mustard	nucleus	20.18	27.62
Bra021113.1-P	Field mustard	nucleus	26.61	27.44
Bra024677.1-P	Field mustard	nucleus	34.56	27.16
Bra002018.1-P	Field mustard	cytosol	25.99	26.65
Bra018997.1-P	Field mustard	nucleus	26.61	26.61
Bra027238.1-P	Field mustard	nucleus	26.61	26.13
Bra016294.1-P	Field mustard	nucleus	32.72	25.97
Bra021114.1-P	Field mustard	nucleus	27.22	24.86
Bra004403.1-P	Field mustard	nucleus	30.58	24.69
Bra031949.1-P	Field mustard	nucleus	24.46	24.62
Bra001597.1-P	Field mustard	nucleus	26.3	24.57
Bra027237.1-P	Field mustard	nucleus	25.99	24.22
Bra026595.1-P	Field mustard	nucleus	28.13	23.35
Bra040152.1-P	Field mustard	nucleus	25.38	23.25
Bra018998.1-P	Field mustard	nucleus	26.91	22.98
Bra017416.1-P	Field mustard	nucleus	27.83	22.86
Bra024818.1-P	Field mustard	nucleus	27.52	22.11

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra034719	EnsemblPlants:Bra034719.1	EnsemblPlants:Bra034719.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4F0X4	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR44543	PANTHER:PTHR44543:SF1	SUPFAM:SSF101941
UniParc:UPI000254817E	SEG:seg	:	:	:	:

Description

AT3G12910 (E=1e-084) | transcription factor

Coordinates

chrA05:-:21131261..21132658

Molecular Weight (calculated)

37742.1 Da

IEP (calculated)

6.683

GRAVY (calculated)

-0.828

Length

327 amino acids

Sequence
(BLAST)

001: MEEMMGSWDK RREEQEEEEE QVLKLPGFRF HPTDEELVGF YLSQKVLLKK SSKIDEIISQ IDIYKFDPWD LPHVAYVTYG LATDQRCVWL EGSRHTEKES
101: YFFCKRGRKY RNSIRPNRVT GSGFWKATGI DKPIYLDGSS KAVIGLKKTL VYYIGGAGKG SKTDWMMHEF RLPTANDTIP GGSTSTHRSP TPSSLLHAEV
201: WTLCRIFKRN ASSRKYTPDS KELASWERVK PQQSNNREAA YISFGDNESS TNKINVMESK ENNERNVFQL HQTPHPHQPI PMEYTSSTQV DNTVPHISND
301: NNMDDVNYEN WDELRSVVEF AFGPSSY

Best Arabidopsis Sequence Match ( AT3G12910.1 )
(BLAST)

001: MEKMIEPRDN TRESEDEDAL KLPGFRFHPT DEELVGYYLS KKVLLKKTSK IDEIVSQIDI YKFDPWDLPR SRNTEKESYF FCKRGRKYRN SIRPNRVTGS
101: GFWKATGIDK PVYSDGSNKA VIGLKKTLVY YLGSAGKGNK TDWMMHEFRL PTANDTIPGG PTHSNPTPTS LLHAEVWTLC RIFKRTVSSR KYTPDWRELA
201: NGKRVKQQQS NYQEAYINFG DNESSSSTNV MNVREGKGNY ERSVFQLQQT PYQHQNQPIL MDTTHVDSFQ HFSNDNIHHE TYETWPDELR SVVEFAFPPS
301: FLS

Arabidopsis Description

NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LSI4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.