Factsheet for Bra019052.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29836	Canola	nucleus	99.0	99.0
Bra026353.1-P	Field mustard	nucleus	84.33	84.33
VIT_19s0014g03290.t01	Wine grape	nucleus	64.33	57.96
Bra001596.1-P	Field mustard	nucleus	56.33	57.29
PGSC0003DMT400039670	Potato	nucleus	66.67	56.98
Solyc12g013620.1.1	Tomato	nucleus	65.67	56.45
Bra021113.1-P	Field mustard	nucleus	58.33	55.2
KRH27201	Soybean	nucleus	62.33	54.2
KRH22137	Soybean	nucleus	61.33	53.64
Bra027238.1-P	Field mustard	nucleus	58.0	52.25
Bra018998.1-P	Field mustard	nucleus	60.67	47.52
Bra038663.1-P	Field mustard	nucleus	36.0	43.2
Bra029201.1-P	Field mustard	cytosol	36.67	41.51
Bra033239.1-P	Field mustard	nucleus	39.33	41.4
Bra008309.1-P	Field mustard	cytosol, nucleus, plastid	35.67	41.15
Bra028645.1-P	Field mustard	nucleus	38.0	41.01
Bra009370.1-P	Field mustard	nucleus	37.33	40.29
Bra004385.1-P	Field mustard	cytosol	36.0	40.0
Bra006015.1-P	Field mustard	cytosol, nucleus, plastid	37.0	39.64
Bra031949.1-P	Field mustard	nucleus	40.33	37.23
Bra027101.1-P	Field mustard	nucleus	39.33	36.99
Bra003998.1-P	Field mustard	nucleus	29.33	36.82
Bra018997.1-P	Field mustard	nucleus	39.0	35.78
Bra040152.1-P	Field mustard	nucleus	40.67	34.17
Bra037743.1-P	Field mustard	nucleus	31.0	33.57
Bra000282.1-P	Field mustard	nucleus	30.33	33.46
Bra027237.1-P	Field mustard	nucleus	38.33	32.76
Bra021114.1-P	Field mustard	nucleus	39.0	32.68
Bra004736.1-P	Field mustard	nucleus	30.33	32.5
Bra001597.1-P	Field mustard	nucleus	37.67	32.29
Bra037283.1-P	Field mustard	nucleus	27.33	29.39
Bra028441.1-P	Field mustard	nucleus	31.67	28.36
Bra013034.1-P	Field mustard	nucleus	26.33	28.11
Bra039353.1-P	Field mustard	nucleus	27.67	27.04
Bra002018.1-P	Field mustard	cytosol	28.0	26.33
Bra034719.1-P	Field mustard	nucleus	28.33	25.99
Bra016294.1-P	Field mustard	nucleus	34.67	25.24
Bra024677.1-P	Field mustard	nucleus	34.33	24.76
Bra004403.1-P	Field mustard	nucleus	32.67	24.2
Bra026595.1-P	Field mustard	nucleus	31.0	23.6
Bra017416.1-P	Field mustard	nucleus	31.0	23.37
Bra024818.1-P	Field mustard	nucleus	30.67	22.6

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra019052	EnsemblPlants:Bra019052.1	EnsemblPlants:Bra019052.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4DRA9	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR44908	SUPFAM:SSF101941	UniParc:UPI0002540B27
SEG:seg	:	:	:	:	:

Description

AT4G27410 (E=8e-148) RD26, ANAC072 | RD26 (RESPONSIVE TO DESICCATION 26); transcription activator/ transcription factor

Coordinates

chrA03:-:26548519..26549644

Molecular Weight (calculated)

33536.2 Da

IEP (calculated)

8.422

GRAVY (calculated)

-0.614

Length

300 amino acids

Sequence
(BLAST)

001: MGVREMDPLA QLSLPPGFRF YPTDEELLVQ YLCRKVAGYH FSLQVIGDID LYKFDPWDLP SKALFGEKEW YFLSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKIITSDGHR VGIKKALIFY AGKAPKGTKT NWIMHEYRLV EHSRSHGSSK LDDWVLCRIY KKTSGSQRQA VPPVQPCREE HSTNGSSSSS SSHHDDVLDS
201: FPEMNDRSFN LPRVNSLRTL LNGNFDWASL AGLNPIPELA PASNGYGGYD AFRAAEGEAE SGLRNLQMNS SELTQSFGYR SSGLSNGGFG LSGQTFEFRQ

Best Arabidopsis Sequence Match ( AT4G27410.2 )
(BLAST)

001: MGVREKDPLA QLSLPPGFRF YPTDEELLVQ YLCRKVAGYH FSLQVIGDID LYKFDPWDLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKIITADGRR VGIKKALVFY AGKAPKGTKT NWIMHEYRLI EHSRSHGSSK LDDWVLCRIY KKTSGSQRQA VTPVQACREE HSTNGSSSSS SSQLDDVLDS
201: FPEIKDQSFN LPRMNSLRTI LNGNFDWASL AGLNPIPELA PTNGLPSYGG YDAFRAAEGE AESGHVNRQQ NSSGLTQSFG YSSSGFGVSG QTFEFRQ

Arabidopsis Description

RD26NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JIU9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.