Factsheet for Bra006015.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra035381.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G08790.1	Bra035381.1-P	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78352	Canola	cytosol, nucleus, plastid	93.21	99.62
CDX81120	Canola	nucleus	82.5	95.85
Bra009370.1-P	Field mustard	nucleus	90.36	91.01
AT5G08790.1	Thale cress	nucleus	89.64	88.69
Bra028645.1-P	Field mustard	nucleus	86.79	87.41
Bra029201.1-P	Field mustard	cytosol	73.57	77.74
Bra038663.1-P	Field mustard	nucleus	69.29	77.6
KRH63977	Soybean	nucleus	62.5	60.14
KRH59618	Soybean	nucleus	63.93	60.07
KRH53959	Soybean	nucleus	62.14	58.98
GSMUA_Achr10P...	Banana	nucleus	52.86	58.04
Bra033239.1-P	Field mustard	nucleus	58.57	57.54
Bra008309.1-P	Field mustard	cytosol, nucleus, plastid	53.21	57.31
VIT_07s0031g02610.t01	Wine grape	nucleus	60.0	57.14
Solyc04g009440.2.1	Tomato	nucleus	61.07	56.81
PGSC0003DMT400082472	Potato	nucleus	61.07	56.44
GSMUA_Achr6P25380_001	Banana	nucleus	54.29	55.47
KXG33829	Sorghum	nucleus	57.5	55.33
GSMUA_Achr6P18720_001	Banana	nucleus	53.93	55.11
Zm00001d042609_P001	Maize	cytosol, mitochondrion, nucleus	57.14	54.24
TraesCS3B01G439600.1	Wheat	nucleus	57.5	54.03
TraesCS3D01G401200.1	Wheat	nucleus	57.5	53.85
TraesCS3A01G406000.1	Wheat	nucleus	57.5	53.85
GSMUA_Achr7P23250_001	Banana	nucleus	51.07	53.36
HORVU1Hr1G063740.1	Barley	nucleus	55.71	53.24
TraesCS1A01G263700.1	Wheat	nucleus	55.36	52.9
Os01t0884300-01	Rice	nucleus	57.14	52.81
TraesCS1D01G263800.1	Wheat	nucleus	55.71	52.0
TraesCS1B01G274300.1	Wheat	nucleus	55.36	51.49
GSMUA_Achr6P17720_001	Banana	nucleus	52.14	50.34
Os11t0184900-02	Rice	nucleus	54.29	46.2
KXG22031	Sorghum	nucleus	55.36	45.45
Zm00001d038221_P001	Maize	plastid	55.0	45.43
GSMUA_Achr3P18990_001	Banana	plastid	53.93	45.35
TraesCS4A01G219700.1	Wheat	nucleus	53.57	44.78
TraesCS4D01G094400.1	Wheat	nucleus	53.57	44.78
TraesCS4B01G098200.1	Wheat	nucleus	53.21	44.61
HORVU4Hr1G017430.7	Barley	nucleus	52.5	44.28
Zm00001d000112_P001	Maize	nucleus	52.86	41.23
OQU83033	Sorghum	nucleus	52.5	38.28
Bra001596.1-P	Field mustard	nucleus	39.64	37.63
Bra004385.1-P	Field mustard	cytosol	36.07	37.41
Bra019052.1-P	Field mustard	nucleus	39.64	37.0
Bra026353.1-P	Field mustard	nucleus	39.29	36.67
Bra027101.1-P	Field mustard	nucleus	41.43	36.36
Bra021113.1-P	Field mustard	nucleus	40.36	35.65
Bra018997.1-P	Field mustard	nucleus	41.43	35.47
Bra003998.1-P	Field mustard	nucleus	30.0	35.15
Bra027237.1-P	Field mustard	nucleus	42.86	34.19
Bra027238.1-P	Field mustard	nucleus	40.36	33.93
Bra021114.1-P	Field mustard	nucleus	42.5	33.24
Bra031949.1-P	Field mustard	nucleus	38.57	33.23
Bra001597.1-P	Field mustard	nucleus	40.71	32.57
Bra040152.1-P	Field mustard	nucleus	40.36	31.65
Bra000282.1-P	Field mustard	nucleus	30.0	30.88
Bra018998.1-P	Field mustard	nucleus	40.71	29.77
Bra037743.1-P	Field mustard	nucleus	28.93	29.24
Bra037283.1-P	Field mustard	nucleus	28.57	28.67
Bra004736.1-P	Field mustard	nucleus	28.57	28.57
Bra013034.1-P	Field mustard	nucleus	27.14	27.05
Bra039353.1-P	Field mustard	nucleus	29.29	26.71
Bra034719.1-P	Field mustard	nucleus	30.0	25.69
Bra028441.1-P	Field mustard	nucleus	29.64	24.78
Bra002018.1-P	Field mustard	cytosol	27.5	24.14
Bra026595.1-P	Field mustard	nucleus	31.43	22.34
Bra017416.1-P	Field mustard	nucleus	31.43	22.11
Bra024818.1-P	Field mustard	nucleus	31.43	21.62
Bra016294.1-P	Field mustard	nucleus	30.71	20.87
Bra024677.1-P	Field mustard	nucleus	30.36	20.43
Bra004403.1-P	Field mustard	nucleus	28.93	20.0

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra006015	EnsemblPlants:Bra006015.1	EnsemblPlants:Bra006015.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4CP77	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31719	PANTHER:PTHR31719:SF16	SUPFAM:SSF101941
UniParc:UPI000253F7C0	SEG:seg	:	:	:	:

Description

AT5G08790 (E=4e-137) ATAF2, anac081 | ATAF2; transcription activator

Coordinates

chrA03:-:1628239..1629362

Molecular Weight (calculated)

31861.6 Da

IEP (calculated)

6.938

GRAVY (calculated)

-0.670

Length

280 amino acids

Sequence
(BLAST)

001: MKAALNLPAG FRFHPTDEEL VRFYLIRKCA SEQISAPVIA EIDLYKFNPW ELPEMSLYGD KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASL NKKNNLRLDD WVLCRIYNKK GTMEKYYPAD EKPRIMADQS SSPFDTSVST LQEEDSSSSG
201: GHGHVVSPDA REVQSEPKWR ELEDALEAFD SSMFGGGSMD MLQSDGYVPQ FMYQPTDCFT TLQDPFEQKP FLNWSFAPQG

Best Arabidopsis Sequence Match ( AT5G08790.1 )
(BLAST)

001: MKSELNLPAG FRFHPTDEEL VKFYLCRKCA SEQISAPVIA EIDLYKFNPW ELPEMSLYGE KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG

Arabidopsis Description

NAC081Protein ATAF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.