Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G08790.1 | KRH14106 | AT5G35750.1 | 18642946 |
| AT5G08790.1 | KRH74010 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH53959 | Soybean | nucleus | 94.5 | 93.22 |
| KRH59618 | Soybean | nucleus | 78.01 | 76.17 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 58.08 | 65.5 |
| KRH17977 | Soybean | nucleus | 60.14 | 65.3 |
| CDY41537 | Canola | nucleus | 55.33 | 64.4 |
| Bra038663.1-P | Field mustard | nucleus | 55.33 | 64.4 |
| CDX84443 | Canola | nucleus | 55.67 | 64.29 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 57.73 | 64.12 |
| KRH16387 | Soybean | nucleus | 61.51 | 63.93 |
| CDY31350 | Canola | nucleus | 58.08 | 63.77 |
| CDY21567 | Canola | nucleus | 60.82 | 63.67 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 64.26 | 63.61 |
| GSMUA_Achr10P... | Banana | nucleus | 55.33 | 63.14 |
| Bra029201.1-P | Field mustard | cytosol | 57.39 | 63.02 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 56.7 | 62.98 |
| CDX69919 | Canola | nucleus | 60.14 | 62.95 |
| Bra009370.1-P | Field mustard | nucleus | 60.14 | 62.95 |
| AT5G08790.1 | Thale cress | nucleus | 61.17 | 62.9 |
| KRH53247 | Soybean | nucleus | 64.26 | 62.54 |
| Bra006015.1-P | Field mustard | cytosol, nucleus, plastid | 60.14 | 62.5 |
| Solyc04g009440.2.1 | Tomato | nucleus | 64.6 | 62.46 |
| Bra028645.1-P | Field mustard | nucleus | 59.45 | 62.23 |
| CDX81120 | Canola | nucleus | 51.2 | 61.83 |
| PGSC0003DMT400082472 | Potato | nucleus | 64.26 | 61.72 |
| KRH64668 | Soybean | nucleus | 63.57 | 61.67 |
| KXG33829 | Sorghum | nucleus | 60.14 | 60.14 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 56.36 | 59.85 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 56.36 | 59.85 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 60.48 | 59.66 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 60.14 | 58.72 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 58.76 | 58.36 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 53.61 | 58.21 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 59.79 | 58.19 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 59.79 | 58.19 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 58.08 | 57.68 |
| Os01t0884300-01 | Rice | nucleus | 59.79 | 57.43 |
| KRH32805 | Soybean | nucleus | 26.8 | 57.35 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 58.76 | 57.0 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 58.42 | 56.48 |
| KRH32801 | Soybean | nucleus | 24.74 | 56.25 |
| CDY39846 | Canola | mitochondrion | 56.7 | 56.12 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 53.61 | 53.79 |
| AT5G63790.2 | Thale cress | cytosol | 58.42 | 52.8 |
| Zm00001d038221_P001 | Maize | plastid | 58.42 | 50.15 |
| Os11t0184900-02 | Rice | nucleus | 56.36 | 49.85 |
| KXG22031 | Sorghum | nucleus | 57.39 | 48.97 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 56.01 | 48.8 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 55.67 | 48.8 |
| TraesCS4D01G094400.1 | Wheat | nucleus | 56.01 | 48.66 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 56.01 | 48.66 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 54.98 | 48.05 |
| KRH57817 | Soybean | nucleus | 29.21 | 48.02 |
| KRH26008 | Soybean | nucleus | 28.87 | 46.67 |
| Zm00001d000112_P001 | Maize | nucleus | 57.39 | 46.52 |
| KRH50570 | Soybean | nucleus | 37.11 | 46.35 |
| OQU83033 | Sorghum | nucleus | 56.01 | 42.45 |
| KRH70773 | Soybean | cytosol | 38.83 | 40.5 |
| KRH74907 | Soybean | nucleus | 38.49 | 40.14 |
| KRH55355 | Soybean | nucleus | 43.99 | 37.98 |
| KRH26056 | Soybean | nucleus | 44.33 | 37.94 |
| KRH22137 | Soybean | nucleus | 44.33 | 37.61 |
| KRG89575 | Soybean | nucleus | 36.08 | 37.5 |
| KRH27201 | Soybean | nucleus | 43.99 | 37.1 |
| KRH49988 | Soybean | nucleus | 44.33 | 35.64 |
| KRH10810 | Soybean | nucleus | 43.3 | 35.59 |
| KRG94779 | Soybean | nucleus | 40.89 | 35.42 |
| KRH06741 | Soybean | nucleus | 42.27 | 34.84 |
| KRH26054 | Soybean | nucleus | 42.96 | 34.72 |
| KRH55357 | Soybean | nucleus | 43.64 | 34.51 |
| KRH70122 | Soybean | nucleus | 41.58 | 34.18 |
| KRH21510 | Soybean | nucleus | 42.61 | 34.16 |
| KRH67671 | Soybean | cytosol | 33.68 | 34.15 |
| KRH08465 | Soybean | nucleus | 42.27 | 33.88 |
| KRH27199 | Soybean | nucleus | 43.64 | 33.87 |
| KRH22138 | Soybean | nucleus | 43.64 | 33.87 |
| KRG95963 | Soybean | nucleus | 37.11 | 32.05 |
| KRH46012 | Soybean | nucleus | 31.27 | 29.93 |
| KRG98971 | Soybean | nucleus | 31.27 | 29.93 |
| KRH22920 | Soybean | nucleus | 35.4 | 29.51 |
| KRH26398 | Soybean | nucleus | 35.05 | 29.23 |
| KRH73618 | Soybean | cytosol | 31.27 | 28.44 |
| KRH14512 | Soybean | nucleus | 31.27 | 27.91 |
| KRH13702 | Soybean | nucleus | 30.24 | 27.67 |
| KRH29090 | Soybean | nucleus | 27.84 | 26.82 |
| KRH24118 | Soybean | cytosol | 27.15 | 26.6 |
| KRG93526 | Soybean | nucleus | 30.93 | 24.52 |
| KRH18479 | Soybean | nucleus | 30.58 | 23.42 |
| KRH01889 | Soybean | nucleus | 31.96 | 23.08 |
| KRH51263 | Soybean | nucleus | 31.62 | 23.0 |
| KRG99080 | Soybean | nucleus | 29.21 | 21.2 |
| KRH74854 | Soybean | nucleus | 31.27 | 20.78 |
| KRH70719 | Soybean | nucleus | 31.27 | 20.59 |
| KRH45921 | Soybean | nucleus | 29.21 | 20.58 |
Protein Annotations
| EntrezGene:100814504 | MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A0K2CTE5 | EMBL:ACUP02002734 | EnsemblPlantsGene:GLYMA_04G208300 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | EnsemblPlants:KRH63977 |
| ProteinID:KRH63977 | ProteinID:KRH63977.1 | EMBL:KT031208 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31719 | PANTHER:PTHR31719:SF16 | SUPFAM:SSF101941 | UniParc:UPI000189D15E | : |
Description
hypothetical protein
Coordinates
chr4:-:48062588..48064505
Molecular Weight (calculated)
33655.9 Da
IEP (calculated)
6.878
GRAVY (calculated)
-0.758
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGELELPPG FRFHPTDEEL VNHYLCRKCA GQPIAVPVIK EVDLYKFDPW QLPEIGFYGE KEWYFFSPRD RKYPNGSRPN RAAGSGYWKA TGADKPIGKP
101: KALGIKKALV FYAGKAPKGV KTNWIMHEYR LANVDRSASK KKNNNLRLDD WVLCRIYNKK GKIEKYNTGA AKMNVEMVHS FEHENETKPE IHKLGNEQLY
201: METSDSVPRL NTDSSSSEHV VSPDVTCERE VQSDPKWNDD LDLKLENAFD FQFNYLDDNN LSVDDYLFGT VQYQMGQLSP LQDMFMYLQK M
101: KALGIKKALV FYAGKAPKGV KTNWIMHEYR LANVDRSASK KKNNNLRLDD WVLCRIYNKK GKIEKYNTGA AKMNVEMVHS FEHENETKPE IHKLGNEQLY
201: METSDSVPRL NTDSSSSEHV VSPDVTCERE VQSDPKWNDD LDLKLENAFD FQFNYLDDNN LSVDDYLFGT VQYQMGQLSP LQDMFMYLQK M
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.