Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G094400.1 | Wheat | nucleus | 97.31 | 97.01 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 97.31 | 97.01 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 96.41 | 96.99 |
| Os11t0184900-02 | Rice | nucleus | 77.54 | 78.72 |
| Zm00001d000112_P001 | Maize | nucleus | 77.25 | 71.87 |
| OQU83033 | Sorghum | nucleus | 74.85 | 65.1 |
| GSMUA_Achr10P... | Banana | nucleus | 47.6 | 62.35 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 50.9 | 62.04 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 48.2 | 60.07 |
| AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 44.61 | 58.89 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 44.91 | 58.14 |
| KRH17977 | Soybean | nucleus | 46.41 | 57.84 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 51.5 | 57.72 |
| Bra038663.1-P | Field mustard | nucleus | 42.81 | 57.2 |
| CDY41537 | Canola | nucleus | 42.81 | 57.2 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 51.2 | 56.81 |
| CDY40894 | Canola | nucleus | 44.01 | 56.54 |
| VIT_18s0001g02300.t01 | Wine grape | nucleus | 50.3 | 56.19 |
| KRH63977 | Soybean | nucleus | 48.8 | 56.01 |
| CDX84443 | Canola | nucleus | 42.22 | 55.95 |
| Bra008309.1-P | Field mustard | cytosol, nucleus, plastid | 43.41 | 55.77 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 43.41 | 55.77 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 43.71 | 55.73 |
| KRH53959 | Soybean | nucleus | 48.8 | 55.25 |
| CDY31350 | Canola | nucleus | 43.71 | 55.09 |
| Bra029201.1-P | Field mustard | cytosol | 43.71 | 55.09 |
| CDX90054 | Canola | nucleus | 47.01 | 55.09 |
| Bra033239.1-P | Field mustard | nucleus | 47.01 | 55.09 |
| CDY21567 | Canola | nucleus | 45.81 | 55.04 |
| Bra028645.1-P | Field mustard | nucleus | 45.81 | 55.04 |
| AT1G01720.1 | Thale cress | nucleus | 47.6 | 55.02 |
| KRH16387 | Soybean | nucleus | 46.11 | 55.0 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 43.11 | 54.96 |
| CDY15158 | Canola | nucleus | 47.01 | 54.9 |
| Solyc06g060230.2.1 | Tomato | nucleus | 48.5 | 54.73 |
| AT5G08790.1 | Thale cress | nucleus | 46.11 | 54.42 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 47.6 | 54.08 |
| Bra009370.1-P | Field mustard | nucleus | 44.91 | 53.96 |
| CDX69919 | Canola | nucleus | 44.91 | 53.96 |
| PGSC0003DMT400023917 | Potato | nucleus | 47.01 | 53.95 |
| PGSC0003DMT400045294 | Potato | nucleus | 47.6 | 53.72 |
| KRH64668 | Soybean | nucleus | 48.2 | 53.67 |
| Solyc11g017470.1.1 | Tomato | nucleus | 46.71 | 53.61 |
| KRH53247 | Soybean | nucleus | 47.9 | 53.51 |
| KRH59618 | Soybean | nucleus | 47.6 | 53.36 |
| Bra006015.1-P | Field mustard | cytosol, nucleus, plastid | 44.61 | 53.21 |
| CDX81120 | Canola | nucleus | 38.02 | 52.7 |
| PGSC0003DMT400082472 | Potato | nucleus | 47.6 | 52.48 |
| Solyc04g009440.2.1 | Tomato | nucleus | 47.01 | 52.16 |
| CDX84050 | Canola | nucleus | 29.04 | 50.26 |
| CDY39846 | Canola | mitochondrion | 42.81 | 48.64 |
| AT5G63790.2 | Thale cress | cytosol | 44.01 | 45.65 |
| TraesCS6B01G075200.1 | Wheat | nucleus | 35.33 | 41.4 |
| TraesCS3B01G371200.1 | Wheat | nucleus | 36.53 | 39.1 |
| TraesCS5B01G480900.2 | Wheat | nucleus | 37.13 | 37.92 |
| TraesCS3B01G093300.1 | Wheat | nucleus | 35.63 | 33.71 |
| TraesCS2B01G119100.1 | Wheat | nucleus | 34.43 | 32.3 |
| TraesCS2B01G119000.1 | Wheat | nucleus | 33.23 | 31.71 |
| TraesCS3B01G194000.1 | Wheat | nucleus | 29.04 | 31.49 |
| TraesCS5B01G142100.1 | Wheat | nucleus | 32.93 | 31.07 |
| TraesCS4B01G173600.1 | Wheat | nucleus | 32.04 | 30.92 |
| TraesCS2B01G228900.1 | Wheat | nucleus | 35.03 | 28.82 |
| TraesCS2B01G076000.1 | Wheat | nucleus | 25.75 | 25.6 |
| TraesCS7B01G472200.1 | Wheat | cytosol, nucleus, plastid | 22.75 | 25.59 |
| TraesCS7B01G472600.1 | Wheat | cytosol, nucleus, plastid | 22.46 | 25.0 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 25.15 | 24.71 |
| TraesCS2B01G076100.1 | Wheat | nucleus | 25.75 | 24.43 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 25.15 | 24.0 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 25.15 | 23.93 |
| TraesCS6B01G335700.1 | Wheat | nucleus | 26.65 | 22.88 |
| TraesCS4B01G328800.1 | Wheat | nucleus | 23.65 | 22.77 |
| TraesCS1B01G272600.1 | Wheat | nucleus | 26.35 | 22.74 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 25.45 | 22.55 |
| TraesCS4B01G328600.1 | Wheat | nucleus | 23.65 | 22.51 |
| TraesCS4B01G328700.1 | Wheat | nucleus | 23.65 | 22.38 |
| TraesCS7B01G219400.1 | Wheat | nucleus | 26.05 | 22.36 |
| TraesCS2B01G075900.1 | Wheat | nucleus | 25.75 | 22.22 |
| TraesCS4B01G329100.1 | Wheat | nucleus | 23.35 | 22.16 |
| TraesCS4B01G328900.1 | Wheat | nucleus | 23.35 | 22.16 |
| TraesCS5B01G338700.1 | Wheat | nucleus | 25.15 | 22.05 |
| TraesCS5B01G226800.1 | Wheat | nucleus | 25.75 | 21.83 |
| TraesCS5B01G338400.1 | Wheat | nucleus | 24.85 | 21.78 |
| TraesCS3B01G436900.1 | Wheat | nucleus | 26.05 | 21.12 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0045893 | GO:GO:1901002 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 | PANTHER:PTHR31719:SF81 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS4B01G098200 |
| EnsemblPlants:TraesCS4B01G098200.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:103054901..103056405
Molecular Weight (calculated)
36692.9 Da
IEP (calculated)
6.260
GRAVY (calculated)
-0.594
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYGFDGALQ LPPGFRFHPT DEELVMYYLC RKCGGLPIAA PVIAEVDLYK FEPWRLPEKA AGGGPDSKEW YFFSPRDRKY PNGSRPNRAA GTGYWKATGA
101: DKPVGSPRPV AIKKALVFYA GKPPKGVKTN WIMHEYRLAD VDRSAAARKK SNNALRLDDW VLCRIYNKKG VIERYDTPDS DVADVKPAPP PAAKIPRQGQ
201: YHAGPAMKVE LSDYGFYQQP SPPATEMLCF DRSGSADRDS NSNHSMPRLH TDSSSSERAL SSPSPDFPSD MDYAESQHAA GLAGGWPGDD WGGVIDDDGF
301: VIDGSLIFDP PSPGAFARDA AAFGDMLTYL QKPF
101: DKPVGSPRPV AIKKALVFYA GKPPKGVKTN WIMHEYRLAD VDRSAAARKK SNNALRLDDW VLCRIYNKKG VIERYDTPDS DVADVKPAPP PAAKIPRQGQ
201: YHAGPAMKVE LSDYGFYQQP SPPATEMLCF DRSGSADRDS NSNHSMPRLH TDSSSSERAL SSPSPDFPSD MDYAESQHAA GLAGGWPGDD WGGVIDDDGF
301: VIDGSLIFDP PSPGAFARDA AAFGDMLTYL QKPF
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.