Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033239.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY15158 | Canola | nucleus | 98.25 | 97.9 |
| AT1G01720.1 | Thale cress | nucleus | 89.82 | 88.58 |
| CDY26031 | Canola | cytosol | 35.44 | 66.89 |
| GSMUA_Achr10P... | Banana | nucleus | 58.25 | 65.1 |
| CDY40894 | Canola | nucleus | 58.25 | 63.85 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 57.89 | 63.46 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 60.7 | 63.14 |
| CDY26032 | Canola | cytosol | 35.09 | 62.11 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 56.14 | 62.02 |
| KXG33829 | Sorghum | nucleus | 63.16 | 61.86 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 56.49 | 61.45 |
| CDY21567 | Canola | nucleus | 59.3 | 60.79 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 63.51 | 60.54 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 63.51 | 60.54 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 63.16 | 60.4 |
| CDX69919 | Canola | nucleus | 58.6 | 60.07 |
| Os01t0884300-01 | Rice | nucleus | 63.86 | 60.07 |
| CDY41537 | Canola | nucleus | 52.63 | 60.0 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 62.11 | 60.0 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 55.09 | 59.92 |
| CDX84443 | Canola | nucleus | 52.98 | 59.92 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 56.14 | 59.7 |
| CDX81120 | Canola | nucleus | 50.18 | 59.34 |
| CDY31350 | Canola | nucleus | 55.09 | 59.25 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 60.7 | 59.04 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 56.49 | 58.76 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 60.0 | 58.36 |
| CDX84050 | Canola | nucleus | 39.3 | 58.03 |
| CDX82430 | Canola | nucleus | 40.35 | 57.79 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 60.35 | 57.33 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 57.89 | 56.9 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 59.65 | 56.48 |
| CDY22671 | Canola | nucleus | 39.3 | 56.28 |
| CDY39846 | Canola | mitochondrion | 54.04 | 52.38 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 58.25 | 49.85 |
| KXG22031 | Sorghum | nucleus | 59.3 | 49.56 |
| Zm00001d038221_P001 | Maize | plastid | 58.95 | 49.56 |
| Os11t0184900-02 | Rice | nucleus | 55.44 | 48.02 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 55.44 | 47.59 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 55.09 | 47.01 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 55.09 | 46.87 |
| TraesCS4D01G094400.1 | Wheat | nucleus | 55.09 | 46.87 |
| CDX82432 | Canola | nucleus | 39.3 | 45.34 |
| Zm00001d000112_P001 | Maize | nucleus | 56.14 | 44.57 |
| OQU83033 | Sorghum | nucleus | 55.09 | 40.89 |
| CDY40930 | Canola | cytosol | 38.25 | 40.37 |
| CDY07348 | Canola | nucleus | 38.25 | 40.22 |
| CDY51500 | Canola | nucleus | 38.25 | 40.07 |
| CDY69545 | Canola | nucleus | 43.86 | 40.06 |
| CDX92828 | Canola | nucleus | 42.11 | 40.0 |
| CDX95931 | Canola | cytosol | 37.89 | 40.0 |
| CDY29836 | Canola | nucleus | 42.11 | 40.0 |
| CDY53806 | Canola | nucleus | 44.21 | 39.62 |
| CDY29303 | Canola | nucleus | 41.4 | 39.33 |
| CDX75833 | Canola | nucleus | 40.7 | 39.06 |
| CDX89253 | Canola | nucleus | 41.05 | 39.0 |
| CDY42902 | Canola | nucleus | 37.54 | 38.21 |
| CDY20109 | Canola | nucleus | 42.11 | 37.85 |
| CDY21844 | Canola | nucleus | 42.11 | 37.85 |
| CDX98560 | Canola | nucleus | 42.11 | 37.5 |
| CDX97674 | Canola | nucleus | 42.11 | 37.38 |
| CDY12886 | Canola | nucleus | 41.75 | 37.07 |
| CDX97675 | Canola | nucleus | 44.56 | 37.03 |
| CDY56427 | Canola | nucleus | 42.46 | 37.0 |
| CDY40970 | Canola | nucleus | 41.75 | 36.96 |
| CDY20131 | Canola | nucleus | 43.51 | 35.43 |
| CDX98562 | Canola | nucleus | 43.86 | 34.82 |
| CDY50880 | Canola | nucleus | 38.6 | 33.85 |
| CDY29983 | Canola | nucleus | 40.7 | 32.68 |
| CDY53654 | Canola | nucleus | 30.53 | 31.18 |
| CDY55499 | Canola | nucleus | 30.53 | 31.18 |
| CDY14865 | Canola | nucleus | 30.18 | 31.05 |
| CDY30373 | Canola | nucleus | 30.18 | 31.05 |
| CDY47485 | Canola | nucleus | 28.77 | 29.39 |
| CDY26794 | Canola | nucleus | 28.42 | 29.03 |
| CDY47486 | Canola | nucleus | 28.42 | 29.03 |
| CDY64562 | Canola | nucleus | 29.82 | 28.91 |
| CDY43391 | Canola | nucleus | 29.82 | 28.81 |
| CDY24238 | Canola | nucleus | 30.18 | 28.01 |
| CDY39487 | Canola | nucleus | 27.37 | 27.76 |
| CDX82569 | Canola | nucleus | 29.12 | 27.48 |
| CDY02222 | Canola | nucleus | 27.02 | 27.4 |
| CDY60122 | Canola | nucleus | 30.88 | 26.91 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 27.72 | 25.73 |
| CDX67438 | Canola | nucleus | 29.82 | 25.37 |
| CDY11662 | Canola | nucleus | 29.82 | 25.37 |
| CDY31385 | Canola | cytosol | 27.72 | 24.76 |
| CDY23551 | Canola | nucleus | 30.53 | 23.2 |
| CDY65270 | Canola | nucleus | 31.58 | 22.78 |
| CDY09368 | Canola | nucleus | 31.93 | 22.41 |
| CDY01755 | Canola | nucleus | 30.88 | 22.17 |
| CDY15835 | Canola | nucleus | 31.58 | 22.11 |
| CDY04129 | Canola | nucleus | 31.58 | 22.06 |
| CDY17437 | Canola | nucleus | 30.88 | 21.67 |
| CDY46433 | Canola | nucleus | 31.23 | 21.6 |
| CDY03050 | Canola | nucleus | 31.23 | 21.5 |
| CDY17595 | Canola | nucleus | 31.23 | 21.34 |
| CDX95910 | Canola | nucleus | 30.53 | 21.27 |
| CDY42810 | Canola | nucleus | 31.23 | 17.45 |
| CDX83510 | Canola | nucleus | 30.88 | 17.25 |
| CDX82429 | Canola | plastid | 2.11 | 5.61 |
| CDY54324 | Canola | extracellular | 5.26 | 5.42 |
| CDY16201 | Canola | plastid | 4.91 | 5.32 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EnsemblPlants:CDX90054 | ProteinID:CDX90054 | ProteinID:CDX90054.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00150558001 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 | PANTHER:PTHR31719:SF16 | GO:Q7Y1A6 |
| UniProt:Q7Y1A6 | SUPFAM:SSF101941 | UniParc:UPI00001A351B | : | : | : |
Description
BnaA10g00280DBnaA10g00280D protein [Source:UniProtKB/TrEMBL;Acc:Q7Y1A6]
Coordinates
chrLK031861:+:1444381..1445811
Molecular Weight (calculated)
32256.3 Da
IEP (calculated)
7.439
GRAVY (calculated)
-0.617
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MSELQLPPGF RFHPTDEELV MHYLCRKCAS QSIAVPIIAE IDLYKYDPWE LPGLALYGEK EWYFFSPRDR KYPNGSRPNR SAGSGYWKAT GADKPIGLPK
101: PVGIKKALVF YAGKAPKGEK TNWIMHEYRL ADVDRSSAAR KKKNSLRLDD WVLCRIYNKK GAIEKRGPPP TPVVYGDEVV EEKPRLSEMG MPPPPVMPND
201: FVYFDTSDSV PKLHTTESSC SEQVVSPEFT SEVQSEPKWK DWSGEKSSLD FGFNYIDATA FGGGGGSNQL FPLQDMFMYN MPKPY
101: PVGIKKALVF YAGKAPKGEK TNWIMHEYRL ADVDRSSAAR KKKNSLRLDD WVLCRIYNKK GAIEKRGPPP TPVVYGDEVV EEKPRLSEMG MPPPPVMPND
201: FVYFDTSDSV PKLHTTESSC SEQVVSPEFT SEVQSEPKWK DWSGEKSSLD FGFNYIDATA FGGGGGSNQL FPLQDMFMYN MPKPY
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.