Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004403.1-P | Field mustard | nucleus | 93.15 | 94.07 |
| CDY01755 | Canola | nucleus | 86.31 | 88.92 |
| Os02t0745250-00 | Rice | nucleus | 29.34 | 64.17 |
| AT1G26870.1 | Thale cress | nucleus | 63.33 | 61.96 |
| CDY46433 | Canola | nucleus | 61.61 | 61.16 |
| CDY65270 | Canola | nucleus | 58.68 | 60.76 |
| HORVU6Hr1G075830.1 | Barley | nucleus | 34.96 | 54.79 |
| CDY26031 | Canola | cytosol | 19.07 | 51.66 |
| CDY26032 | Canola | cytosol | 19.07 | 48.45 |
| EES07261 | Sorghum | nucleus | 42.3 | 44.59 |
| TraesCS6D01G286300.1 | Wheat | nucleus | 41.81 | 43.85 |
| TraesCS6A01G307200.1 | Wheat | nucleus | 41.56 | 43.7 |
| TraesCS6B01G335700.1 | Wheat | nucleus | 41.56 | 43.7 |
| CDX82430 | Canola | nucleus | 20.78 | 42.71 |
| CDX67438 | Canola | nucleus | 34.23 | 41.79 |
| CDY11662 | Canola | nucleus | 34.23 | 41.79 |
| CDY22671 | Canola | nucleus | 20.29 | 41.71 |
| TraesCS2B01G076000.1 | Wheat | nucleus | 33.25 | 40.48 |
| TraesCS2B01G076100.1 | Wheat | nucleus | 34.23 | 39.77 |
| HORVU2Hr1G011360.1 | Barley | nucleus | 34.72 | 39.23 |
| HORVU2Hr1G011390.1 | Barley | nucleus | 34.72 | 39.23 |
| TraesCS2D01G061600.1 | Wheat | nucleus | 34.23 | 38.89 |
| TraesCS2A01G063300.1 | Wheat | nucleus | 35.7 | 38.32 |
| Zm00001d050410_P001 | Maize | nucleus | 35.7 | 38.32 |
| CDY55499 | Canola | nucleus | 25.92 | 37.99 |
| CDY30373 | Canola | nucleus | 25.67 | 37.91 |
| EES13897 | Sorghum | nucleus | 35.45 | 37.76 |
| CDY53654 | Canola | nucleus | 25.67 | 37.63 |
| HORVU2Hr1G011370.1 | Barley | nucleus | 35.45 | 37.47 |
| TraesCS2D01G061500.1 | Wheat | nucleus | 35.45 | 37.47 |
| TraesCS5B01G338400.1 | Wheat | nucleus | 34.72 | 37.27 |
| TraesCS5B01G338700.1 | Wheat | nucleus | 34.72 | 37.27 |
| TraesCS5D01G344100.1 | Wheat | nucleus | 34.72 | 37.27 |
| Zm00001d032182_P001 | Maize | nucleus | 35.7 | 37.24 |
| CDY14865 | Canola | nucleus | 25.18 | 37.18 |
| TraesCS2A01G063200.1 | Wheat | nucleus | 34.96 | 36.95 |
| TraesCS5A01G339600.1 | Wheat | nucleus | 34.23 | 36.75 |
| TraesCS2B01G075900.1 | Wheat | nucleus | 34.72 | 36.69 |
| Os08t0436700-01 | Rice | nucleus | 34.47 | 36.62 |
| TraesCS5D01G472600.1 | Wheat | nucleus | 33.99 | 36.48 |
| TraesCS2A01G063400.1 | Wheat | nucleus | 24.94 | 36.3 |
| Zm00001d020446_P001 | Maize | nucleus | 34.96 | 36.29 |
| GSMUA_Achr10P... | Banana | cytosol | 37.41 | 36.26 |
| OQU89481 | Sorghum | nucleus | 35.45 | 35.98 |
| CDY16201 | Canola | plastid | 22.98 | 35.74 |
| CDY54324 | Canola | extracellular | 24.21 | 35.74 |
| Zm00001d018038_P001 | Maize | nucleus | 41.81 | 34.69 |
| CDX82432 | Canola | nucleus | 20.78 | 34.41 |
| CDY42902 | Canola | nucleus | 23.23 | 33.93 |
| CDX92828 | Canola | nucleus | 24.69 | 33.67 |
| CDY29836 | Canola | nucleus | 24.45 | 33.33 |
| CDY41537 | Canola | nucleus | 20.29 | 33.2 |
| CDX95931 | Canola | cytosol | 21.76 | 32.96 |
| CDY40930 | Canola | cytosol | 21.76 | 32.96 |
| CDX84443 | Canola | nucleus | 20.29 | 32.94 |
| CDY43391 | Canola | nucleus | 23.72 | 32.88 |
| CDX89253 | Canola | nucleus | 23.96 | 32.67 |
| CDY64562 | Canola | nucleus | 23.47 | 32.65 |
| CDY40894 | Canola | nucleus | 20.54 | 32.31 |
| CDY29303 | Canola | nucleus | 23.47 | 32.0 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 20.29 | 31.92 |
| CDX82569 | Canola | nucleus | 23.47 | 31.79 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 20.05 | 31.78 |
| CDY24238 | Canola | nucleus | 23.72 | 31.6 |
| CDY07348 | Canola | nucleus | 20.78 | 31.37 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 20.05 | 31.3 |
| CDY51500 | Canola | nucleus | 20.78 | 31.25 |
| CDY31350 | Canola | nucleus | 20.05 | 30.94 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 19.8 | 30.92 |
| CDX90054 | Canola | nucleus | 21.27 | 30.53 |
| CDY60122 | Canola | nucleus | 24.21 | 30.28 |
| CDY21567 | Canola | nucleus | 20.54 | 30.22 |
| CDY15158 | Canola | nucleus | 21.03 | 30.07 |
| CDX75833 | Canola | nucleus | 21.76 | 29.97 |
| CDY26794 | Canola | nucleus | 20.29 | 29.75 |
| CDY47485 | Canola | nucleus | 20.29 | 29.75 |
| CDY47486 | Canola | nucleus | 20.29 | 29.75 |
| CDY21844 | Canola | nucleus | 22.98 | 29.65 |
| CDY50880 | Canola | nucleus | 23.47 | 29.54 |
| CDY02222 | Canola | nucleus | 20.29 | 29.54 |
| CDY39487 | Canola | nucleus | 20.29 | 29.54 |
| CDX69919 | Canola | nucleus | 20.05 | 29.5 |
| CDY20109 | Canola | nucleus | 22.74 | 29.34 |
| CDX81120 | Canola | nucleus | 17.11 | 29.05 |
| CDX98560 | Canola | nucleus | 22.49 | 28.75 |
| CDX97674 | Canola | nucleus | 22.49 | 28.66 |
| CDY69545 | Canola | nucleus | 21.76 | 28.53 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 21.27 | 28.34 |
| CDY53806 | Canola | nucleus | 22.0 | 28.3 |
| CDY39846 | Canola | mitochondrion | 20.05 | 27.89 |
| CDY31385 | Canola | cytosol | 21.52 | 27.59 |
| CDY12886 | Canola | nucleus | 21.52 | 27.41 |
| CDY40970 | Canola | nucleus | 21.52 | 27.33 |
| CDY29983 | Canola | nucleus | 23.47 | 27.04 |
| CDY56427 | Canola | nucleus | 21.52 | 26.91 |
| CDY23551 | Canola | nucleus | 23.72 | 25.87 |
| CDY20131 | Canola | nucleus | 22.0 | 25.71 |
| CDX97675 | Canola | nucleus | 21.52 | 25.66 |
| CDX98562 | Canola | nucleus | 21.03 | 23.96 |
| CDY04129 | Canola | nucleus | 22.74 | 22.79 |
| CDY17437 | Canola | nucleus | 22.25 | 22.41 |
| CDX84050 | Canola | nucleus | 10.51 | 22.28 |
| CDY03050 | Canola | nucleus | 22.25 | 21.98 |
| CDY15835 | Canola | nucleus | 21.76 | 21.87 |
| CDY17595 | Canola | nucleus | 22.25 | 21.82 |
| CDY09368 | Canola | nucleus | 21.52 | 21.67 |
| CDX83510 | Canola | nucleus | 25.67 | 20.59 |
| CDY42810 | Canola | nucleus | 25.67 | 20.59 |
| CDX82429 | Canola | plastid | 0.49 | 1.87 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078E277 | EnsemblPlants:CDX95910 | ProteinID:CDX95910 | ProteinID:CDX95910.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00101917001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44574 |
| PANTHER:PTHR44574:SF4 | SUPFAM:SSF101941 | UniParc:UPI0004EE816D | SEG:seg | : | : |
Description
BnaA07g28210D
Coordinates
chrLK031892:+:24156..25939
Molecular Weight (calculated)
46368.1 Da
IEP (calculated)
7.849
GRAVY (calculated)
-0.616
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDVLLPGFR FHPTDEELVS FYLRRKVEHR PLSIKLITQL DIYKYDPWDL PKFAMTGEKE WYFYCPRDRK YKNSTRPNRV TSAGFWKATG TDRPIYSSDG
101: SKCIGLRKSL VFYKGRAAKG VKTDWMMHEF RLPSSSTHSD THLSPNVSNI FINVVHVKKL SSYDSWAICR IFRKTSTTAP KAIPHSFVSS LPTEASTDTE
201: PYEKSSNTSH ISPENSASFN FYRKNMNVTK PRSSYYDEKE VTKTSTCTST SPFSYMDFTS SASPGPCADQ QYLRSLLLAS QETQPSQLPK FINNNDISSF
301: LLNTSSSNSS FLGGYTNQIG SNIDLTTAIL AQEKCPALVN LSQEYQDIGF EENIGGANQD DHHKVKFGDV SSTMVGDQHQ NQRHHMLMES YYSSFSTTND
401: DLPTCFSIT
101: SKCIGLRKSL VFYKGRAAKG VKTDWMMHEF RLPSSSTHSD THLSPNVSNI FINVVHVKKL SSYDSWAICR IFRKTSTTAP KAIPHSFVSS LPTEASTDTE
201: PYEKSSNTSH ISPENSASFN FYRKNMNVTK PRSSYYDEKE VTKTSTCTST SPFSYMDFTS SASPGPCADQ QYLRSLLLAS QETQPSQLPK FINNNDISSF
301: LLNTSSSNSS FLGGYTNQIG SNIDLTTAIL AQEKCPALVN LSQEYQDIGF EENIGGANQD DHHKVKFGDV SSTMVGDQHQ NQRHHMLMES YYSSFSTTND
401: DLPTCFSIT
001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
Arabidopsis Description
FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.