Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82569 | Canola | nucleus | 92.86 | 90.4 |
| CDY43391 | Canola | nucleus | 85.71 | 85.42 |
| CDY24238 | Canola | nucleus | 85.71 | 82.08 |
| AT3G12910.1 | Thale cress | nucleus | 77.89 | 75.58 |
| CDY60122 | Canola | nucleus | 79.93 | 71.87 |
| CDY23551 | Canola | nucleus | 80.95 | 63.47 |
| CDY26031 | Canola | cytosol | 24.49 | 47.68 |
| CDY30373 | Canola | nucleus | 44.56 | 47.29 |
| GSMUA_Achr10P... | Banana | cytosol | 42.86 | 47.19 |
| CDY14865 | Canola | nucleus | 44.22 | 46.93 |
| Zm00001d007850_P001 | Maize | nucleus | 39.8 | 46.61 |
| CDY53654 | Canola | nucleus | 43.2 | 45.52 |
| CDY55499 | Canola | nucleus | 43.2 | 45.52 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 43.88 | 44.95 |
| KRH46012 | Soybean | nucleus | 46.26 | 44.74 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 39.8 | 44.66 |
| CDY26032 | Canola | cytosol | 24.15 | 44.1 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 45.58 | 44.08 |
| KRG98971 | Soybean | nucleus | 45.24 | 43.75 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 36.73 | 43.2 |
| CDX82430 | Canola | nucleus | 28.23 | 41.71 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 43.2 | 41.37 |
| CDY22671 | Canola | nucleus | 27.89 | 41.21 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 44.56 | 38.87 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 44.9 | 38.48 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 45.92 | 38.46 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 44.56 | 38.42 |
| Zm00001d013151_P001 | Maize | cytosol | 43.88 | 38.39 |
| Zm00001d031164_P001 | Maize | nucleus | 39.46 | 37.91 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 43.54 | 37.65 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 43.88 | 37.28 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 44.56 | 37.22 |
| EES17466 | Sorghum | nucleus | 38.44 | 37.17 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 44.22 | 37.14 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 36.39 | 37.02 |
| EER93360 | Sorghum | nucleus | 45.92 | 36.49 |
| EER95852 | Sorghum | nucleus | 42.52 | 36.44 |
| Os03t0777000-01 | Rice | nucleus | 44.56 | 36.19 |
| Zm00001d018773_P001 | Maize | nucleus | 43.2 | 35.47 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 43.54 | 35.16 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 43.88 | 35.05 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 45.24 | 34.64 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 44.22 | 34.48 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 43.88 | 34.22 |
| CDY41537 | Canola | nucleus | 27.21 | 32.0 |
| CDX82432 | Canola | nucleus | 26.87 | 31.98 |
| CDX67438 | Canola | nucleus | 36.39 | 31.94 |
| CDY11662 | Canola | nucleus | 36.05 | 31.64 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 27.21 | 31.01 |
| CDX84443 | Canola | nucleus | 26.53 | 30.95 |
| CDY26794 | Canola | nucleus | 29.25 | 30.82 |
| CDY47486 | Canola | nucleus | 29.25 | 30.82 |
| CDY40894 | Canola | nucleus | 27.21 | 30.77 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 27.21 | 30.53 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 27.21 | 30.53 |
| CDY47485 | Canola | nucleus | 28.91 | 30.47 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 26.87 | 30.38 |
| CDY39487 | Canola | nucleus | 28.57 | 29.89 |
| CDX90054 | Canola | nucleus | 28.91 | 29.82 |
| CDY31350 | Canola | nucleus | 26.87 | 29.81 |
| CDX95931 | Canola | cytosol | 27.21 | 29.63 |
| CDY40930 | Canola | cytosol | 27.21 | 29.63 |
| CDY02222 | Canola | nucleus | 28.23 | 29.54 |
| CDY07348 | Canola | nucleus | 27.21 | 29.52 |
| CDY51500 | Canola | nucleus | 27.21 | 29.41 |
| CDY15158 | Canola | nucleus | 28.57 | 29.37 |
| CDX69919 | Canola | nucleus | 27.55 | 29.14 |
| CDY21567 | Canola | nucleus | 27.55 | 29.14 |
| CDX89253 | Canola | nucleus | 28.91 | 28.33 |
| CDY29303 | Canola | nucleus | 28.57 | 28.0 |
| CDY42902 | Canola | nucleus | 26.53 | 27.86 |
| CDX81120 | Canola | nucleus | 22.79 | 27.8 |
| CDY12886 | Canola | nucleus | 30.27 | 27.73 |
| CDX92828 | Canola | nucleus | 28.23 | 27.67 |
| CDY29836 | Canola | nucleus | 28.23 | 27.67 |
| CDY40970 | Canola | nucleus | 30.27 | 27.64 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 28.57 | 27.36 |
| CDY69545 | Canola | nucleus | 28.91 | 27.24 |
| CDY53806 | Canola | nucleus | 29.25 | 27.04 |
| CDX75833 | Canola | nucleus | 26.87 | 26.6 |
| CDY39846 | Canola | mitochondrion | 26.53 | 26.53 |
| CDY31385 | Canola | cytosol | 28.57 | 26.33 |
| CDX98560 | Canola | nucleus | 28.57 | 26.25 |
| CDY21844 | Canola | nucleus | 28.23 | 26.18 |
| CDX97674 | Canola | nucleus | 28.57 | 26.17 |
| CDX83510 | Canola | nucleus | 45.24 | 26.08 |
| CDY65270 | Canola | nucleus | 35.03 | 26.08 |
| CDY20109 | Canola | nucleus | 27.89 | 25.87 |
| CDY42810 | Canola | nucleus | 44.56 | 25.69 |
| CDY56427 | Canola | nucleus | 28.23 | 25.38 |
| CDY46433 | Canola | nucleus | 34.69 | 24.76 |
| CDY50880 | Canola | nucleus | 27.21 | 24.62 |
| CDY01755 | Canola | nucleus | 32.99 | 24.43 |
| CDY20131 | Canola | nucleus | 28.23 | 23.71 |
| CDX97675 | Canola | nucleus | 27.55 | 23.62 |
| CDX95910 | Canola | nucleus | 32.65 | 23.47 |
| CDY29983 | Canola | nucleus | 28.23 | 23.38 |
| CDX84050 | Canola | nucleus | 15.31 | 23.32 |
| CDY09368 | Canola | nucleus | 31.63 | 22.91 |
| CDY15835 | Canola | nucleus | 31.29 | 22.6 |
| CDX98562 | Canola | nucleus | 27.55 | 22.56 |
| CDY17437 | Canola | nucleus | 30.95 | 22.41 |
| CDY04129 | Canola | nucleus | 30.95 | 22.3 |
| CDY03050 | Canola | nucleus | 30.27 | 21.5 |
| CDY17595 | Canola | nucleus | 30.27 | 21.34 |
| CDY16201 | Canola | plastid | 6.46 | 7.22 |
| CDY54324 | Canola | extracellular | 6.8 | 7.22 |
| CDX82429 | Canola | plastid | 0.68 | 1.87 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078JGJ6 | UniProt:A0A078JGJ6 | EnsemblPlants:CDY64562 | ProteinID:CDY64562 |
| ProteinID:CDY64562.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00042350001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 |
| PANTHER:PTHR44543:SF1 | SUPFAM:SSF101941 | UniParc:UPI0004EEFBFE | SEG:seg | : | : |
Description
BnaCnng44060DBnaCnng44060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGJ6]
Coordinates
chrLK034484:-:25699..27167
Molecular Weight (calculated)
34085.2 Da
IEP (calculated)
9.127
GRAVY (calculated)
-0.836
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGSCDKRRG EQEEEEEQKL KLPGFRFHPT DEELVGFYLA KKVLLKKPSK IDEIISHIDI YKFDPWDLPR KNTEKESYFF CKRGRKYRNS IRPNRVTGSG
101: FWKATGIDKP VYSDGSSKSV IGLKKTLVYY IGSAGKGSKT DWMMHEFRLP TANDTIPAYK CLQASEVWTL CRIFKRNVSS RKYTPDWREL AGGKRVKPQQ
201: SKYQEAYISF GDNESTISTN NINIMESKGN YERNVSQLHQ TPHQHQPILM DTASTTQDDY TGPYFSNHEI HNITYENWDE LRTVVDFAFG PSLS
101: FWKATGIDKP VYSDGSSKSV IGLKKTLVYY IGSAGKGSKT DWMMHEFRLP TANDTIPAYK CLQASEVWTL CRIFKRNVSS RKYTPDWREL AGGKRVKPQQ
201: SKYQEAYISF GDNESTISTN NINIMESKGN YERNVSQLHQ TPHQHQPILM DTASTTQDDY TGPYFSNHEI HNITYENWDE LRTVVDFAFG PSLS
001: MEKMIEPRDN TRESEDEDAL KLPGFRFHPT DEELVGYYLS KKVLLKKTSK IDEIVSQIDI YKFDPWDLPR SRNTEKESYF FCKRGRKYRN SIRPNRVTGS
101: GFWKATGIDK PVYSDGSNKA VIGLKKTLVY YLGSAGKGNK TDWMMHEFRL PTANDTIPGG PTHSNPTPTS LLHAEVWTLC RIFKRTVSSR KYTPDWRELA
201: NGKRVKQQQS NYQEAYINFG DNESSSSTNV MNVREGKGNY ERSVFQLQQT PYQHQNQPIL MDTTHVDSFQ HFSNDNIHHE TYETWPDELR SVVEFAFPPS
301: FLS
101: GFWKATGIDK PVYSDGSNKA VIGLKKTLVY YLGSAGKGNK TDWMMHEFRL PTANDTIPGG PTHSNPTPTS LLHAEVWTLC RIFKRTVSSR KYTPDWRELA
201: NGKRVKQQQS NYQEAYINFG DNESSSSTNV MNVREGKGNY ERSVFQLQQT PYQHQNQPIL MDTTHVDSFQ HFSNDNIHHE TYETWPDELR SVVEFAFPPS
301: FLS
Arabidopsis Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LSI4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.