Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G08790.1 | CDX74635 | AT5G35750.1 | 18642946 |
| AT5G08790.1 | CDY47297 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40732 | Canola | cytosol, nucleus, plastid | 94.27 | 95.74 |
| Bra028645.1-P | Field mustard | nucleus | 98.47 | 92.81 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 87.02 | 87.02 |
| CDX69919 | Canola | nucleus | 90.84 | 85.61 |
| CDX81120 | Canola | nucleus | 78.63 | 85.48 |
| CDY21567 | Canola | nucleus | 89.69 | 84.53 |
| AT5G08790.1 | Thale cress | nucleus | 90.08 | 83.39 |
| CDY41537 | Canola | nucleus | 74.43 | 78.0 |
| CDY31350 | Canola | nucleus | 77.1 | 76.23 |
| CDX84443 | Canola | nucleus | 73.28 | 76.19 |
| CDY39846 | Canola | mitochondrion | 77.1 | 68.71 |
| CDY26031 | Canola | cytosol | 37.02 | 64.24 |
| CDY26032 | Canola | cytosol | 36.64 | 59.63 |
| CDY40894 | Canola | nucleus | 57.25 | 57.69 |
| KRH59618 | Soybean | nucleus | 64.89 | 57.05 |
| CDY15158 | Canola | nucleus | 62.21 | 56.99 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 56.49 | 56.92 |
| KRH63977 | Soybean | nucleus | 62.98 | 56.7 |
| CDX90054 | Canola | nucleus | 61.45 | 56.49 |
| Solyc04g009440.2.1 | Tomato | nucleus | 64.89 | 56.48 |
| GSMUA_Achr10P... | Banana | nucleus | 54.96 | 56.47 |
| PGSC0003DMT400082472 | Potato | nucleus | 64.89 | 56.11 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 62.6 | 55.78 |
| CDX82430 | Canola | nucleus | 41.98 | 55.28 |
| KRH53959 | Soybean | nucleus | 62.21 | 55.25 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 56.49 | 54.01 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 56.11 | 53.65 |
| CDY22671 | Canola | nucleus | 40.46 | 53.27 |
| KXG33829 | Sorghum | nucleus | 59.16 | 53.26 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 59.16 | 52.54 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 59.54 | 52.35 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 53.44 | 52.24 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 59.54 | 52.17 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 59.54 | 52.17 |
| CDX84050 | Canola | nucleus | 38.17 | 51.81 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 57.63 | 51.54 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 57.25 | 51.19 |
| Os01t0884300-01 | Rice | nucleus | 59.16 | 51.16 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 57.63 | 50.33 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 57.25 | 49.83 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 54.96 | 49.66 |
| Os11t0184900-02 | Rice | nucleus | 56.87 | 45.29 |
| KXG22031 | Sorghum | nucleus | 57.63 | 44.28 |
| Zm00001d038221_P001 | Maize | plastid | 57.25 | 44.25 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 56.11 | 44.14 |
| CDX82432 | Canola | nucleus | 41.6 | 44.13 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 56.11 | 43.88 |
| TraesCS4D01G094400.1 | Wheat | nucleus | 56.11 | 43.88 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 55.73 | 43.71 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 55.34 | 43.67 |
| Zm00001d000112_P001 | Maize | nucleus | 55.73 | 40.67 |
| CDX92828 | Canola | nucleus | 43.51 | 38.0 |
| CDY29836 | Canola | nucleus | 43.51 | 38.0 |
| CDY40930 | Canola | cytosol | 38.93 | 37.78 |
| CDX75833 | Canola | nucleus | 42.75 | 37.71 |
| CDY69545 | Canola | nucleus | 44.66 | 37.5 |
| CDX95931 | Canola | cytosol | 38.55 | 37.41 |
| OQU83033 | Sorghum | nucleus | 54.58 | 37.24 |
| CDX89253 | Canola | nucleus | 42.37 | 37.0 |
| CDY29303 | Canola | nucleus | 42.37 | 37.0 |
| CDY07348 | Canola | nucleus | 38.17 | 36.9 |
| CDY42902 | Canola | nucleus | 39.31 | 36.79 |
| CDY51500 | Canola | nucleus | 38.17 | 36.76 |
| CDY53806 | Canola | nucleus | 44.27 | 36.48 |
| CDY12886 | Canola | nucleus | 44.66 | 36.45 |
| CDY40970 | Canola | nucleus | 44.66 | 36.34 |
| CDX98560 | Canola | nucleus | 43.51 | 35.62 |
| CDX97674 | Canola | nucleus | 43.51 | 35.51 |
| CDY20109 | Canola | nucleus | 42.75 | 35.33 |
| CDY21844 | Canola | nucleus | 42.75 | 35.33 |
| CDY56427 | Canola | nucleus | 43.13 | 34.56 |
| CDX97675 | Canola | nucleus | 44.66 | 34.11 |
| CDY20131 | Canola | nucleus | 43.89 | 32.86 |
| CDX98562 | Canola | nucleus | 44.27 | 32.31 |
| CDY50880 | Canola | nucleus | 40.08 | 32.31 |
| CDY29983 | Canola | nucleus | 40.84 | 30.14 |
| CDY30373 | Canola | nucleus | 30.92 | 29.24 |
| CDY14865 | Canola | nucleus | 30.53 | 28.88 |
| CDY26794 | Canola | nucleus | 30.53 | 28.67 |
| CDY47485 | Canola | nucleus | 30.53 | 28.67 |
| CDY47486 | Canola | nucleus | 30.53 | 28.67 |
| CDY53654 | Canola | nucleus | 30.53 | 28.67 |
| CDY55499 | Canola | nucleus | 30.53 | 28.67 |
| CDY64562 | Canola | nucleus | 30.53 | 27.21 |
| CDY43391 | Canola | nucleus | 30.53 | 27.12 |
| CDY39487 | Canola | nucleus | 29.01 | 27.05 |
| CDY02222 | Canola | nucleus | 28.63 | 26.69 |
| CDX82569 | Canola | nucleus | 30.53 | 26.49 |
| CDY24238 | Canola | nucleus | 30.92 | 26.38 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 29.77 | 25.41 |
| CDY60122 | Canola | nucleus | 31.68 | 25.38 |
| CDY11662 | Canola | nucleus | 31.3 | 24.48 |
| CDY31385 | Canola | cytosol | 29.77 | 24.45 |
| CDX67438 | Canola | nucleus | 30.92 | 24.18 |
| CDY23551 | Canola | nucleus | 31.3 | 21.87 |
| CDY65270 | Canola | nucleus | 32.44 | 21.52 |
| CDY15835 | Canola | nucleus | 33.21 | 21.38 |
| CDY03050 | Canola | nucleus | 33.59 | 21.26 |
| CDY09368 | Canola | nucleus | 32.82 | 21.18 |
| CDY17437 | Canola | nucleus | 32.82 | 21.18 |
| CDY17595 | Canola | nucleus | 33.59 | 21.1 |
| CDY04129 | Canola | nucleus | 32.82 | 21.08 |
| CDY01755 | Canola | nucleus | 31.3 | 20.65 |
| CDY46433 | Canola | nucleus | 32.06 | 20.39 |
| CDX95910 | Canola | nucleus | 31.3 | 20.05 |
| CDX83510 | Canola | nucleus | 32.44 | 16.67 |
| CDY42810 | Canola | nucleus | 32.44 | 16.67 |
| CDX82429 | Canola | plastid | 1.91 | 4.67 |
| CDY54324 | Canola | extracellular | 4.2 | 3.97 |
| CDY16201 | Canola | plastid | 3.44 | 3.42 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078I6M1 | UniProt:A0A078I6M1 | EnsemblPlants:CDY44788 | ProteinID:CDY44788 |
| ProteinID:CDY44788.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00080792001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 |
| PANTHER:PTHR31719:SF16 | SUPFAM:SSF101941 | UniParc:UPI0004EEFEF9 | : | : | : |
Description
BnaC02g00990DBnaC02g00990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6M1]
Coordinates
chrLK032601:-:114412..115758
Molecular Weight (calculated)
29916.3 Da
IEP (calculated)
6.550
GRAVY (calculated)
-0.679
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAGLNLPAG FRFHPTDEEL VQFYLCRKCA SEEISAPVIA EIDLYKFNPW ELPEMSLYGE KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYYPAD EKPRTMTASS PFDASGGRVV SPDALEVQSE
201: PKWGELENAF DASMFDGGSM DLLQSEDFVP QFLYQPSYDF NSWQEDPPEQ KPFLNWSFAP QG
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYYPAD EKPRTMTASS PFDASGGRVV SPDALEVQSE
201: PKWGELENAF DASMFDGGSM DLLQSEDFVP QFLYQPSYDF NSWQEDPPEQ KPFLNWSFAP QG
001: MKSELNLPAG FRFHPTDEEL VKFYLCRKCA SEQISAPVIA EIDLYKFNPW ELPEMSLYGE KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
Arabidopsis Description
NAC081Protein ATAF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.