Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039353.1-P | Field mustard | nucleus | 98.7 | 98.7 |
| CDY43391 | Canola | nucleus | 94.14 | 97.97 |
| CDX82569 | Canola | nucleus | 86.32 | 87.75 |
| CDY64562 | Canola | nucleus | 82.08 | 85.71 |
| AT3G12910.1 | Thale cress | nucleus | 81.43 | 82.51 |
| CDY60122 | Canola | nucleus | 84.69 | 79.51 |
| CDY23551 | Canola | nucleus | 85.67 | 70.13 |
| CDY30373 | Canola | nucleus | 44.95 | 49.82 |
| CDY14865 | Canola | nucleus | 44.63 | 49.46 |
| GSMUA_Achr10P... | Banana | cytosol | 42.67 | 49.06 |
| CDY26031 | Canola | cytosol | 23.78 | 48.34 |
| Zm00001d007850_P001 | Maize | nucleus | 39.41 | 48.21 |
| CDY53654 | Canola | nucleus | 43.65 | 48.03 |
| CDY55499 | Canola | nucleus | 43.65 | 48.03 |
| KRH46012 | Soybean | nucleus | 46.91 | 47.37 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 39.74 | 46.56 |
| KRG98971 | Soybean | nucleus | 45.93 | 46.38 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 45.6 | 46.05 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 43.0 | 45.99 |
| CDY26032 | Canola | cytosol | 23.45 | 44.72 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 36.16 | 44.4 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 43.32 | 43.32 |
| CDX82430 | Canola | nucleus | 27.36 | 42.21 |
| CDY22671 | Canola | nucleus | 27.36 | 42.21 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 45.93 | 40.17 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 43.97 | 40.06 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 43.97 | 39.59 |
| Zm00001d013151_P001 | Maize | cytosol | 43.0 | 39.29 |
| Zm00001d031164_P001 | Maize | nucleus | 39.09 | 39.22 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 44.63 | 39.14 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 43.0 | 38.82 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 43.32 | 38.78 |
| EES17466 | Sorghum | nucleus | 38.11 | 38.49 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 43.32 | 38.44 |
| EER93360 | Sorghum | nucleus | 46.25 | 38.38 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 43.97 | 38.35 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 35.83 | 38.06 |
| Os03t0777000-01 | Rice | nucleus | 44.63 | 37.85 |
| EER95852 | Sorghum | nucleus | 42.02 | 37.61 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 43.97 | 36.68 |
| Zm00001d018773_P001 | Maize | nucleus | 42.67 | 36.59 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 43.32 | 36.54 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 44.63 | 35.68 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 43.32 | 35.28 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 43.0 | 35.01 |
| CDX67438 | Canola | nucleus | 35.83 | 32.84 |
| CDY11662 | Canola | nucleus | 35.5 | 32.54 |
| CDX82432 | Canola | nucleus | 25.73 | 31.98 |
| CDY41537 | Canola | nucleus | 25.73 | 31.6 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 26.38 | 31.4 |
| CDY26794 | Canola | nucleus | 28.34 | 31.18 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 26.38 | 30.92 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 26.38 | 30.92 |
| CDY47486 | Canola | nucleus | 28.01 | 30.82 |
| CDY40894 | Canola | nucleus | 26.06 | 30.77 |
| CDX84443 | Canola | nucleus | 25.08 | 30.56 |
| CDY47485 | Canola | nucleus | 27.69 | 30.47 |
| CDY39487 | Canola | nucleus | 27.69 | 30.25 |
| CDX90054 | Canola | nucleus | 28.01 | 30.18 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 25.41 | 30.0 |
| CDY02222 | Canola | nucleus | 27.36 | 29.89 |
| CDY07348 | Canola | nucleus | 26.38 | 29.89 |
| CDY31350 | Canola | nucleus | 25.73 | 29.81 |
| CDY51500 | Canola | nucleus | 26.38 | 29.78 |
| CDY15158 | Canola | nucleus | 27.69 | 29.72 |
| CDX95931 | Canola | cytosol | 26.06 | 29.63 |
| CDY40930 | Canola | cytosol | 26.06 | 29.63 |
| CDX69919 | Canola | nucleus | 26.71 | 29.5 |
| CDY21567 | Canola | nucleus | 26.71 | 29.5 |
| CDY12886 | Canola | nucleus | 30.29 | 28.97 |
| CDY40970 | Canola | nucleus | 30.29 | 28.88 |
| CDX89253 | Canola | nucleus | 28.01 | 28.67 |
| CDX92828 | Canola | nucleus | 28.01 | 28.67 |
| CDY29836 | Canola | nucleus | 28.01 | 28.67 |
| CDY29303 | Canola | nucleus | 27.69 | 28.33 |
| CDY69545 | Canola | nucleus | 28.66 | 28.21 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 28.01 | 28.01 |
| CDY42902 | Canola | nucleus | 25.41 | 27.86 |
| CDX81120 | Canola | nucleus | 21.82 | 27.8 |
| CDY53806 | Canola | nucleus | 28.66 | 27.67 |
| CDY65270 | Canola | nucleus | 35.5 | 27.59 |
| CDX83510 | Canola | nucleus | 45.6 | 27.45 |
| CDY42810 | Canola | nucleus | 45.6 | 27.45 |
| CDY31385 | Canola | cytosol | 28.01 | 26.96 |
| CDX75833 | Canola | nucleus | 26.06 | 26.94 |
| CDY21844 | Canola | nucleus | 27.69 | 26.81 |
| CDY56427 | Canola | nucleus | 28.34 | 26.61 |
| CDX98560 | Canola | nucleus | 27.69 | 26.56 |
| CDY39846 | Canola | mitochondrion | 25.41 | 26.53 |
| CDY20109 | Canola | nucleus | 27.36 | 26.5 |
| CDX97674 | Canola | nucleus | 27.69 | 26.48 |
| CDY46433 | Canola | nucleus | 34.53 | 25.73 |
| CDY20131 | Canola | nucleus | 28.66 | 25.14 |
| CDY01755 | Canola | nucleus | 32.25 | 24.94 |
| CDX97675 | Canola | nucleus | 27.69 | 24.78 |
| CDY50880 | Canola | nucleus | 26.06 | 24.62 |
| CDX95910 | Canola | nucleus | 31.6 | 23.72 |
| CDX98562 | Canola | nucleus | 27.69 | 23.68 |
| CDY29983 | Canola | nucleus | 27.36 | 23.66 |
| CDX84050 | Canola | nucleus | 14.66 | 23.32 |
| CDY09368 | Canola | nucleus | 29.64 | 22.41 |
| CDY15835 | Canola | nucleus | 29.32 | 22.11 |
| CDY17437 | Canola | nucleus | 28.99 | 21.92 |
| CDY04129 | Canola | nucleus | 28.99 | 21.81 |
| CDY03050 | Canola | nucleus | 28.66 | 21.26 |
| CDY17595 | Canola | nucleus | 28.66 | 21.1 |
| CDY16201 | Canola | plastid | 6.51 | 7.6 |
| CDY54324 | Canola | extracellular | 6.19 | 6.86 |
| CDX82429 | Canola | plastid | 0.98 | 2.8 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078GHY0 | UniProt:A0A078GHY0 | EnsemblPlants:CDY24238 | ProteinID:CDY24238 |
| ProteinID:CDY24238.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00026353001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 |
| PANTHER:PTHR44543:SF1 | SUPFAM:SSF101941 | UniParc:UPI0004EEF6E9 | SEG:seg | : | : |
Description
BnaC01g38180DBnaC01g38180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHY0]
Coordinates
chrLK032155:-:466708..468139
Molecular Weight (calculated)
35510.6 Da
IEP (calculated)
8.575
GRAVY (calculated)
-0.792
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAMGSWDT RREEQEEEEK QVLKLPGFRF HPTDEELVGF YLSKKVFLKK SSKIDEIISQ IDIYKFDPWD LPRSSNTEKE SYFFCRRGRK YRNSIRPNRV
101: TGSGFWKATG IDKPVYSDGS SKAVIGLKKT LVYYLGSAGK GSKTDWMMHE FRLPTANDTI PGGSTLVNPT PSSLLHAEVW TLCRIFKRNV SSRKYTPDWR
201: ELAGGKRMKP QQSKYQEAYI SFGDNESSSS TNNINVMERK ENYERNVFQL RQTPHQHQPI PVDTTITTQV DSTVPHFSND NIHDITYENW DELRSVVEFA
301: FGPSFLS
101: TGSGFWKATG IDKPVYSDGS SKAVIGLKKT LVYYLGSAGK GSKTDWMMHE FRLPTANDTI PGGSTLVNPT PSSLLHAEVW TLCRIFKRNV SSRKYTPDWR
201: ELAGGKRMKP QQSKYQEAYI SFGDNESSSS TNNINVMERK ENYERNVFQL RQTPHQHQPI PVDTTITTQV DSTVPHFSND NIHDITYENW DELRSVVEFA
301: FGPSFLS
001: MEKMIEPRDN TRESEDEDAL KLPGFRFHPT DEELVGYYLS KKVLLKKTSK IDEIVSQIDI YKFDPWDLPR SRNTEKESYF FCKRGRKYRN SIRPNRVTGS
101: GFWKATGIDK PVYSDGSNKA VIGLKKTLVY YLGSAGKGNK TDWMMHEFRL PTANDTIPGG PTHSNPTPTS LLHAEVWTLC RIFKRTVSSR KYTPDWRELA
201: NGKRVKQQQS NYQEAYINFG DNESSSSTNV MNVREGKGNY ERSVFQLQQT PYQHQNQPIL MDTTHVDSFQ HFSNDNIHHE TYETWPDELR SVVEFAFPPS
301: FLS
101: GFWKATGIDK PVYSDGSNKA VIGLKKTLVY YLGSAGKGNK TDWMMHEFRL PTANDTIPGG PTHSNPTPTS LLHAEVWTLC RIFKRTVSSR KYTPDWRELA
201: NGKRVKQQQS NYQEAYINFG DNESSSSTNV MNVREGKGNY ERSVFQLQQT PYQHQNQPIL MDTTHVDSFQ HFSNDNIHHE TYETWPDELR SVVEFAFPPS
301: FLS
Arabidopsis Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LSI4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.