Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013151_P001 | Maize | cytosol | 78.38 | 86.31 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 78.38 | 78.8 |
| EER95852 | Sorghum | nucleus | 53.24 | 57.43 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 39.19 | 55.34 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 44.32 | 53.42 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 42.7 | 53.02 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 30.54 | 52.8 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 39.46 | 52.71 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 35.41 | 52.4 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 38.11 | 51.09 |
| KRH73618 | Soybean | cytosol | 42.7 | 49.38 |
| Bra000282.1-P | Field mustard | nucleus | 35.68 | 48.53 |
| AT2G43000.1 | Thale cress | nucleus | 35.95 | 48.36 |
| KRG98971 | Soybean | nucleus | 39.73 | 48.36 |
| KRH46012 | Soybean | nucleus | 39.73 | 48.36 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 37.03 | 48.24 |
| KRH14512 | Soybean | nucleus | 42.43 | 48.16 |
| PGSC0003DMT400090327 | Potato | cytosol | 36.76 | 47.89 |
| CDY53654 | Canola | nucleus | 35.95 | 47.67 |
| Solyc05g021090.2.1 | Tomato | nucleus | 35.95 | 47.67 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 37.84 | 47.46 |
| CDY55499 | Canola | nucleus | 35.68 | 47.31 |
| Bra037743.1-P | Field mustard | nucleus | 35.41 | 47.29 |
| CDY30373 | Canola | nucleus | 35.41 | 47.29 |
| Bra004736.1-P | Field mustard | nucleus | 35.68 | 47.14 |
| PGSC0003DMT400003082 | Potato | nucleus | 35.68 | 46.81 |
| CDY43391 | Canola | nucleus | 37.3 | 46.78 |
| CDY24238 | Canola | nucleus | 38.38 | 46.25 |
| CDY14865 | Canola | nucleus | 34.59 | 46.21 |
| CDY64562 | Canola | nucleus | 36.49 | 45.92 |
| Solyc02g069960.2.1 | Tomato | nucleus | 38.38 | 45.81 |
| Bra039353.1-P | Field mustard | nucleus | 37.84 | 45.6 |
| AT3G12910.1 | Thale cress | nucleus | 37.3 | 45.54 |
| PGSC0003DMT400054407 | Potato | nucleus | 38.65 | 45.54 |
| EES17466 | Sorghum | nucleus | 37.03 | 45.07 |
| CDX82569 | Canola | nucleus | 36.76 | 45.03 |
| KRH13702 | Soybean | nucleus | 38.11 | 44.34 |
| Solyc07g045030.2.1 | Tomato | nucleus | 38.65 | 43.2 |
| CDY60122 | Canola | nucleus | 37.84 | 42.81 |
| Bra034719.1-P | Field mustard | nucleus | 37.57 | 42.51 |
| PGSC0003DMT400049124 | Potato | nucleus | 28.65 | 42.4 |
| CDY23551 | Canola | nucleus | 37.57 | 37.07 |
| EES07261 | Sorghum | nucleus | 33.78 | 32.22 |
| EES13897 | Sorghum | nucleus | 33.24 | 32.03 |
| EER92917 | Sorghum | nucleus | 27.03 | 30.58 |
| OQU89481 | Sorghum | nucleus | 32.97 | 30.27 |
| KXG33829 | Sorghum | nucleus | 23.51 | 29.9 |
| EES03797 | Sorghum | nucleus | 24.86 | 29.11 |
| EER96087 | Sorghum | nucleus | 22.16 | 28.28 |
| EER93215 | Sorghum | nucleus | 22.97 | 26.65 |
| CDY42810 | Canola | nucleus | 35.95 | 26.08 |
| CDX83510 | Canola | nucleus | 35.68 | 25.88 |
| KXG32136 | Sorghum | plastid | 26.49 | 25.79 |
| EES19541 | Sorghum | nucleus | 28.92 | 25.54 |
| EER92326 | Sorghum | nucleus | 25.95 | 25.26 |
| KXG22031 | Sorghum | nucleus | 23.24 | 25.22 |
| EES13251 | Sorghum | mitochondrion, nucleus | 25.14 | 24.87 |
| EES01882 | Sorghum | nucleus | 28.65 | 23.98 |
| OQU90111 | Sorghum | nucleus | 26.49 | 23.45 |
| KXG20943 | Sorghum | nucleus, plastid | 24.32 | 23.32 |
| EER99924 | Sorghum | cytosol, nucleus, plastid | 23.78 | 22.68 |
| OQU83033 | Sorghum | nucleus | 23.51 | 22.66 |
| EER99985 | Sorghum | nucleus | 21.62 | 22.6 |
| EES07907 | Sorghum | plastid | 22.7 | 20.9 |
| EES16571 | Sorghum | nucleus | 23.51 | 20.28 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:8083941 | UniProt:C5WZ37 | EnsemblPlants:EER93360 | ProteinID:EER93360 |
| ProteinID:EER93360.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 | PANTHER:PTHR44543:SF3 |
| EnsemblPlantsGene:SORBI_3001G071000 | SUPFAM:SSF101941 | unigene:Sbi.19763 | UniParc:UPI0001A82C3D | RefSeq:XP_002466362.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:-:5407631..5409957
Molecular Weight (calculated)
41040.3 Da
IEP (calculated)
7.165
GRAVY (calculated)
-0.532
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAKEFGREA VISMEKVKRD GEALIAARAG DEEEDDVVLP GFRFHPTDEE LVTFYLRRKV ARKPLSMEII KEMDIYKHDP WDLPKASTVG GEKEWYFFCL
101: RGRKYRNSIR PNRVTGSGFW KATGIDRPIY SAAAAGAATA NSGESIGLKK SLVYYRGSAG KGTKTDWMMH EFRLPPAAAA ATDASQSMQE AEVWTICRIF
201: KRNIAYKRQP QQHQQQAWRQ QPAGSNGPPP LLAESSSNTG SFESDGGGDE YMNCLAVPAT APGVPRQHQI GSILNGGGVS VTGSSFFRES VHGQQFQGQW
301: LNRFPAPAAI EQKPQLLDSS AMTIAFHQND QSVAAAAMTN DQCYKDGYWD EIAKFMEVND PTVLYDCRYA
101: RGRKYRNSIR PNRVTGSGFW KATGIDRPIY SAAAAGAATA NSGESIGLKK SLVYYRGSAG KGTKTDWMMH EFRLPPAAAA ATDASQSMQE AEVWTICRIF
201: KRNIAYKRQP QQHQQQAWRQ QPAGSNGPPP LLAESSSNTG SFESDGGGDE YMNCLAVPAT APGVPRQHQI GSILNGGGVS VTGSSFFRES VHGQQFQGQW
301: LNRFPAPAAI EQKPQLLDSS AMTIAFHQND QSVAAAAMTN DQCYKDGYWD EIAKFMEVND PTVLYDCRYA
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.