Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003082 | Potato | nucleus | 90.68 | 89.72 |
| Solyc07g045030.2.1 | Tomato | nucleus | 61.65 | 51.96 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 53.76 | 50.34 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 36.2 | 47.2 |
| GSMUA_Achr10P... | Banana | cytosol | 44.44 | 46.44 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 41.58 | 46.4 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 45.52 | 45.85 |
| Zm00001d007850_P001 | Maize | nucleus | 40.86 | 45.42 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 45.88 | 45.07 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 42.29 | 45.04 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 44.09 | 44.57 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 48.03 | 44.08 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 45.52 | 43.05 |
| Solyc02g069960.2.1 | Tomato | nucleus | 47.31 | 42.58 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 43.73 | 42.51 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 45.16 | 41.04 |
| EES17466 | Sorghum | nucleus | 41.58 | 38.16 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 46.59 | 38.12 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 46.59 | 37.9 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 45.52 | 37.69 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 38.71 | 37.37 |
| Zm00001d013151_P001 | Maize | cytosol | 44.8 | 37.2 |
| Zm00001d031164_P001 | Maize | nucleus | 40.5 | 36.93 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 46.24 | 36.86 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 44.8 | 36.76 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 46.24 | 36.75 |
| Os03t0777000-01 | Rice | nucleus | 46.95 | 36.19 |
| EER95852 | Sorghum | nucleus | 44.44 | 36.15 |
| EER93360 | Sorghum | nucleus | 47.67 | 35.95 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 45.16 | 35.8 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 46.59 | 35.71 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 44.09 | 35.55 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 45.88 | 34.78 |
| Zm00001d018773_P001 | Maize | nucleus | 44.09 | 34.36 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 46.24 | 34.22 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 45.88 | 33.95 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 45.88 | 33.33 |
| Solyc02g061780.2.1 | Tomato | nucleus | 27.96 | 31.97 |
| Solyc04g005610.2.1 | Tomato | nucleus | 29.03 | 29.45 |
| Solyc05g007770.2.1 | Tomato | nucleus | 28.32 | 28.01 |
| Solyc05g007550.1.1 | Tomato | nucleus | 38.71 | 27.69 |
| Solyc02g087920.2.1 | Tomato | nucleus | 37.99 | 27.68 |
| Solyc10g055760.1.1 | Tomato | cytosol | 27.96 | 27.56 |
| Solyc11g017470.1.1 | Tomato | nucleus | 28.67 | 27.49 |
| Solyc06g060230.2.1 | Tomato | nucleus | 28.32 | 26.69 |
| Solyc04g009440.2.1 | Tomato | nucleus | 28.67 | 26.58 |
| Solyc07g063420.2.1 | Tomato | nucleus | 29.03 | 24.62 |
| Solyc10g083450.1.1 | Tomato | cytosol | 24.73 | 23.88 |
| Solyc11g065540.1.1 | Tomato | nucleus | 25.81 | 23.3 |
| Solyc01g102740.2.1 | Tomato | nucleus | 33.33 | 22.52 |
| Solyc07g063410.2.1 | Tomato | nucleus | 28.32 | 22.19 |
| Solyc12g013620.1.1 | Tomato | nucleus | 27.6 | 22.06 |
| Solyc10g006880.2.1 | Tomato | nucleus | 27.96 | 21.97 |
| Solyc07g006840.1.1 | Tomato | nucleus | 27.6 | 15.94 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | UniProt:K4BZF9 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR44543 | PANTHER:PTHR44543:SF2 | SUPFAM:SSF101941 | EnsemblPlantsGene:Solyc05g021090.2 | EnsemblPlants:Solyc05g021090.2.1 | UniParc:UPI00027656B0 |
| SEG:seg | : | : | : | : | : |
Description
Transcription factor JUNGBRUNNEN 1 [Source:Projected from Arabidopsis thaliana (AT2G43000) UniProtKB/Swiss-Prot;Acc:Q9SK55]
Coordinates
chr5:+:26343121..26349617
Molecular Weight (calculated)
32567.2 Da
IEP (calculated)
7.588
GRAVY (calculated)
-0.862
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDEIKTMSK EEEDVILPGF RFHPTDEELI GFYLRRKVEN KRISMELIRH IDIYKYDPWD LPKADDKEMY YFCMRGRKYK NSVRPNRVTK GGFWKATGID
101: KPVYSSTTKC IIIGLKKCLV YYRGSAGKGT KTDWMMHEFR LPPTSNTNQQ AEVWTLCRIF KRSSSTYTRS SYNTQEVKHP IGDASSKACS LESDENSTDH
201: DHSNSFRDMS FPHQNYNNYV AQMDETRNQQ NPIPHESTFP SSSSISFWNT NSTQEDYLFG DHGNKWDDLK SIVDLATMM
101: KPVYSSTTKC IIIGLKKCLV YYRGSAGKGT KTDWMMHEFR LPPTSNTNQQ AEVWTLCRIF KRSSSTYTRS SYNTQEVKHP IGDASSKACS LESDENSTDH
201: DHSNSFRDMS FPHQNYNNYV AQMDETRNQQ NPIPHESTFP SSSSISFWNT NSTQEDYLFG DHGNKWDDLK SIVDLATMM
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.