CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008399_P001	Maize	nucleus	77.89	74.37
GSMUA_Achr7P21770_001	Banana	nucleus	32.11	61.0
KRH50570	Soybean	nucleus	31.84	51.93
GSMUA_Achr10P...	Banana	nucleus	37.89	47.68
CDY51500	Canola	nucleus	32.63	45.59
AT1G69490.1	Thale cress	nucleus	32.11	45.52
VIT_01s0026g02710.t01	Wine grape	nucleus	33.68	45.39
CDY07348	Canola	nucleus	32.37	45.39
GSMUA_Achr4P02380_001	Banana	nucleus	39.74	45.21
Bra004385.1-P	Field mustard	cytosol	31.58	44.44
CDX95931	Canola	cytosol	31.58	44.44
CDY40930	Canola	cytosol	31.58	44.44
GSMUA_AchrUn_...	Banana	nucleus	38.16	44.34
PGSC0003DMT400047440	Potato	nucleus	32.89	44.33
KRH70773	Soybean	cytosol	32.11	43.73
Solyc05g007770.2.1	Tomato	nucleus	32.37	43.62
KRH74907	Soybean	nucleus	31.84	43.37
Solyc04g005610.2.1	Tomato	nucleus	31.32	43.27
KRG89575	Soybean	nucleus	31.84	43.21
GSMUA_Achr6P32320_001	Banana	nucleus	38.95	42.9
PGSC0003DMT400007341	Potato	mitochondrion	31.84	42.76
EER92326	Sorghum	nucleus	42.63	42.63
Bra003998.1-P	Field mustard	nucleus	26.32	41.84
TraesCS3B01G093300.1	Wheat	nucleus	38.68	41.64
EER99924	Sorghum	cytosol, nucleus, plastid	42.37	41.49
Os01t0104200-00	Rice	nucleus	36.84	41.3
HORVU3Hr1G014140.3	Barley	nucleus	37.89	41.26
TraesCS3D01G078900.1	Wheat	nucleus	38.16	41.08
TraesCS3A01G078400.1	Wheat	nucleus	38.16	41.08
GSMUA_Achr3P18010_001	Banana	nucleus	38.68	39.95
EER96087	Sorghum	nucleus	30.0	39.31
KXG33829	Sorghum	nucleus	29.47	38.49
EER93215	Sorghum	nucleus	30.26	36.05
EES03797	Sorghum	nucleus	29.47	35.44
EER99985	Sorghum	nucleus	32.37	34.75
EES07907	Sorghum	plastid	36.05	34.08
GSMUA_Achr9P04960_001	Banana	nucleus	35.26	33.75
EES16571	Sorghum	nucleus	37.63	33.33
KXG22031	Sorghum	nucleus	29.47	32.84
OQU90111	Sorghum	nucleus	35.53	32.3
EER92917	Sorghum	nucleus	25.0	29.05
OQU83033	Sorghum	nucleus	28.95	28.65
EES17466	Sorghum	nucleus	21.58	26.97
EER95852	Sorghum	nucleus	23.95	26.53
EER93360	Sorghum	nucleus	25.79	26.49
EES07261	Sorghum	nucleus	25.53	25.0
EES13897	Sorghum	nucleus	25.0	24.74
OQU89481	Sorghum	nucleus	25.0	23.57
EES13251	Sorghum	mitochondrion, nucleus	21.84	22.19
KXG20943	Sorghum	nucleus, plastid	21.05	20.73
EES19541	Sorghum	nucleus	22.37	20.29
EES01882	Sorghum	nucleus	23.42	20.14

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8072366	UniProt:A0A1B6Q2I2	ProteinID:AQY17417.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	EnsemblPlants:KXG32136	ProteinID:KXG32136
ProteinID:KXG32136.1	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR45430
EnsemblPlantsGene:SORBI_3003G105800	SUPFAM:SSF101941	UniParc:UPI0003C6869F	RefSeq:XP_002457533.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:9589189..9591125

Molecular Weight (calculated)

40943.0 Da

IEP (calculated)

8.071

GRAVY (calculated)

-0.437

Length

380 amino acids

Sequence
(BLAST)

001: MTIDLGLAAS AASSSSGGRR VGGVPPPSTP CTALPPGFRF HPTDEELILH YLRKRAAAAP CPAPVIAEVD IYKFDPWDLP AKAVFGEAEW YFFSPRDRKY
101: PNGVRPNRAA GSGYWKATGT DKPITLSAAG AGSSSDSSSR AAMIGVKKAL VFYKGRPPKG MKTSWIMHEY RLAEALNAAN TYRPIRFKNS SMRLDDWVLC
201: RIYKKTTPQL AYMSPPHEEA SPSMDGGGGG GFDLGLQPDD SVSADDIMAA TSSSYASRLP RPASISDYLV DYSAVSELFE ALPPPPPETT TTTAAQTGTD
301: AATRFYFGNG EPSTSVAQQQ SPLKRRSMEE DYTNSGMNML HASSSSKRVM MSDHHHASSM AASNAFSVFE PGQTSLQDRI

Best Arabidopsis Sequence Match ( AT1G61110.1 )
(BLAST)

001: MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS

Arabidopsis Description

NAC025NAC transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY42]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.