Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d014297_P006 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G08790.1 | Zm00001d014297_P006 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU83033 | Sorghum | nucleus | 91.09 | 85.16 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 72.14 | 78.01 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 72.7 | 77.91 |
| TraesCS4D01G094400.1 | Wheat | nucleus | 72.42 | 77.61 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 71.87 | 77.25 |
| Os11t0184900-02 | Rice | nucleus | 69.08 | 75.38 |
| GSMUA_Achr10P... | Banana | nucleus | 44.85 | 63.14 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 47.91 | 62.77 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 45.4 | 60.82 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 49.3 | 60.0 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 41.78 | 58.14 |
| VIT_18s0001g02300.t01 | Wine grape | nucleus | 47.91 | 57.53 |
| KRH17977 | Soybean | nucleus | 42.9 | 57.46 |
| KRH63977 | Soybean | nucleus | 46.52 | 57.39 |
| AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 40.11 | 56.92 |
| AT1G01720.1 | Thale cress | nucleus | 45.4 | 56.4 |
| Bra038663.1-P | Field mustard | nucleus | 39.28 | 56.4 |
| CDY41537 | Canola | nucleus | 39.28 | 56.4 |
| KRH53959 | Soybean | nucleus | 46.24 | 56.27 |
| CDY40894 | Canola | nucleus | 40.67 | 56.15 |
| CDX90054 | Canola | nucleus | 44.57 | 56.14 |
| Bra033239.1-P | Field mustard | nucleus | 44.57 | 56.14 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 45.68 | 55.78 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 40.67 | 55.73 |
| CDY15158 | Canola | nucleus | 44.29 | 55.59 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 40.11 | 55.38 |
| Bra008309.1-P | Field mustard | cytosol, nucleus, plastid | 40.11 | 55.38 |
| KRH59618 | Soybean | nucleus | 45.96 | 55.37 |
| KRH16387 | Soybean | nucleus | 43.18 | 55.36 |
| CDX84443 | Canola | nucleus | 38.72 | 55.16 |
| Solyc06g060230.2.1 | Tomato | nucleus | 45.4 | 55.07 |
| CDY21567 | Canola | nucleus | 42.62 | 55.04 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 40.11 | 54.96 |
| Bra028645.1-P | Field mustard | nucleus | 42.34 | 54.68 |
| KRH64668 | Soybean | nucleus | 45.68 | 54.67 |
| Bra029201.1-P | Field mustard | cytosol | 40.11 | 54.34 |
| CDY31350 | Canola | nucleus | 40.11 | 54.34 |
| KRH53247 | Soybean | nucleus | 45.13 | 54.18 |
| PGSC0003DMT400045294 | Potato | nucleus | 44.57 | 54.05 |
| CDX69919 | Canola | nucleus | 41.78 | 53.96 |
| Bra009370.1-P | Field mustard | nucleus | 41.78 | 53.96 |
| AT5G08790.1 | Thale cress | nucleus | 42.34 | 53.71 |
| PGSC0003DMT400023917 | Potato | nucleus | 42.9 | 52.92 |
| Bra006015.1-P | Field mustard | cytosol, nucleus, plastid | 41.23 | 52.86 |
| Solyc04g009440.2.1 | Tomato | nucleus | 44.29 | 52.82 |
| CDX81120 | Canola | nucleus | 35.38 | 52.7 |
| PGSC0003DMT400082472 | Potato | nucleus | 44.29 | 52.48 |
| Solyc11g017470.1.1 | Tomato | nucleus | 42.34 | 52.23 |
| Zm00001d038221_P001 | Maize | plastid | 47.91 | 50.74 |
| CDX84050 | Canola | nucleus | 27.02 | 50.26 |
| CDY39846 | Canola | mitochondrion | 39.28 | 47.96 |
| AT5G63790.2 | Thale cress | cytosol | 40.11 | 44.72 |
| Zm00001d019207_P001 | Maize | nucleus | 34.82 | 41.67 |
| Zm00001d005208_P001 | Maize | nucleus | 35.1 | 41.58 |
| Zm00001d034601_P001 | Maize | nucleus | 35.93 | 41.35 |
| Zm00001d012527_P001 | Maize | cytosol, mitochondrion, nucleus | 33.7 | 39.29 |
| Zm00001d013003_P001 | Maize | nucleus, plastid | 35.38 | 34.6 |
| Zm00001d007850_P001 | Maize | nucleus | 22.01 | 31.47 |
| Zm00001d021818_P002 | Maize | nucleus | 35.38 | 30.31 |
| Zm00001d028999_P001 | Maize | nucleus | 30.64 | 29.49 |
| Zm00001d008399_P001 | Maize | nucleus | 32.03 | 28.89 |
| Zm00001d014843_P001 | Maize | nucleus | 20.06 | 26.87 |
| Zm00001d027530_P001 | Maize | nucleus | 24.23 | 26.77 |
| Zm00001d048347_P001 | Maize | nucleus | 23.4 | 26.5 |
| Zm00001d031164_P001 | Maize | nucleus | 22.56 | 26.47 |
| Zm00001d013151_P001 | Maize | cytosol | 23.96 | 25.6 |
| Zm00001d022424_P001 | Maize | nucleus | 22.84 | 24.85 |
| Zm00001d049687_P001 | Maize | nucleus | 24.51 | 23.91 |
| Zm00001d018773_P001 | Maize | nucleus | 23.4 | 23.46 |
| Zm00001d050410_P001 | Maize | nucleus | 24.79 | 23.36 |
| Zm00001d036364_P001 | Maize | nucleus | 21.17 | 23.31 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 23.68 | 23.1 |
| Zm00001d035076_P001 | Maize | mitochondrion, nucleus | 22.84 | 22.91 |
| Zm00001d023294_P001 | Maize | nucleus | 30.08 | 22.74 |
| Zm00001d032182_P001 | Maize | nucleus | 24.23 | 22.19 |
| Zm00001d038207_P001 | Maize | nucleus | 25.63 | 21.9 |
| Zm00001d042580_P001 | Maize | nucleus | 27.02 | 21.7 |
| Zm00001d020446_P001 | Maize | nucleus | 23.4 | 21.32 |
| Zm00001d010239_P001 | Maize | nucleus | 24.51 | 21.15 |
| Zm00001d018038_P001 | Maize | nucleus | 24.79 | 18.05 |
Protein Annotations
| EntrezGene:100384376 | MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A1X7YF05 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0045893 | GO:GO:1901002 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 |
| PANTHER:PTHR31719:SF81 | SUPFAM:SSF101941 | UniParc:UPI00022122FA | EnsemblPlantsGene:Zm00001d000112 | EnsemblPlants:Zm00001d000112_P001 | EnsemblPlants:Zm00001d000112_T001 |
| SEG:seg | : | : | : | : | : |
Description
NAC-transcription factor 125NAC domain-containing protein 2
Coordinates
chrB73V4_ctg52:-:346937..349561
Molecular Weight (calculated)
38844.3 Da
IEP (calculated)
5.122
GRAVY (calculated)
-0.480
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCGGALQLP PGFRFHPTDD ELVMYYLLRK CGGLPLAAPV IAEVDLYKFD PWQLPEKAFG GEKEWYFFSP RDRKYPNGSR PNRAAGTGYW KATGADKPVG
101: SPRPVAIKKA LVFYAGKPPK GVKTNWIMHE YRLADVDRSA AARKKTNNAL RLDDWVLCRI YNKKGVIERY DTVDDDDGDG AVAEDVKPVP APAASKNPRA
201: SARVGAAAAA PMKVELPEYG GGYYDYDDLE TPSAGMLCFD RPSAPAPADR DSNNSVPWTT HHTHTDNSSS GSERVLSPSP DLPDRDHAES QPAAAAAAAG
301: WWPVGGDWGS AAEDGFMVDV DVDDGSSLFG PLSPGLFARV DAAAFGFGDM LASYLHKPF
101: SPRPVAIKKA LVFYAGKPPK GVKTNWIMHE YRLADVDRSA AARKKTNNAL RLDDWVLCRI YNKKGVIERY DTVDDDDGDG AVAEDVKPVP APAASKNPRA
201: SARVGAAAAA PMKVELPEYG GGYYDYDDLE TPSAGMLCFD RPSAPAPADR DSNNSVPWTT HHTHTDNSSS GSERVLSPSP DLPDRDHAES QPAAAAAAAG
301: WWPVGGDWGS AAEDGFMVDV DVDDGSSLFG PLSPGLFARV DAAAFGFGDM LASYLHKPF
001: MKSELNLPAG FRFHPTDEEL VKFYLCRKCA SEQISAPVIA EIDLYKFNPW ELPEMSLYGE KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
Arabidopsis Description
NAC081Protein ATAF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.